FFCP PHASE1:Hg19::chr1:203151897..203151908,-: Difference between revisions
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|id=chr1:203151897..203151908,-
|short_description=p15@CHI3L1
|description=CAGE_peak_15_at_CHI3L1_5end
|association_with_transcript=60bp_to_ENST00000472064_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1116 | |EntrezGene=1116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1932 | |HGNC=1932 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=60bp_to_ENST00000472064_5end | |||
|cluster_id=chr1:203151897..203151908,- | |||
|coexpression_cluster_id=C283 | |||
|description=CAGE_peak_15_at_CHI3L1_5end | |||
|id=chr1:203151897..203151908,- | |||
|ontology_enrichment_celltype=CL:0000153!1.45e-20!9;CL:0000447!1.45e-20!9;CL:0000667!2.98e-16!6;CL:0000058!2.98e-16!6;CL:0000138!2.98e-16!6;CL:0000327!7.92e-13!14;CL:0000499!3.46e-10!27 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.42e-41;9!CL:0000447;1.42e-41;9!CL:0000138;2.51e-28;6!CL:0000235;5.06e-28;6!CL:0000327;7.44e-25;15!CL:0000499;2.78e-23;28!CL:0002540;2.17e-16;6!CL:0000135;1.89e-15;3!CL:0000388;1.89e-15;3!CL:0000214;5.49e-15;3!CL:0002092;4.59e-10;10!CL:0000151;1.48e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.47e-41,9;CL:0000447,1.47e-41,9;CL:0000058,2.51e-28,6;CL:0000138,2.51e-28,6;CL:0000235,8.26e-28,6;CL:0000327,7.60e-25,15;CL:0000499,2.87e-23,28;CL:0002540,2.11e-16,6;CL:0000135,1.95e-15,3;CL:0000388,1.95e-15,3;CL:0000214,5.68e-15,3;CL:0000151,3.78e-10,36;CL:0002092,4.52e-10,10;CL:0000134,3.33e-08,354;CL:0002320,5.41e-08,361;CL:0000219,2.99e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;1.32e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,9.61e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001954!4.19e-08!2;UBERON:0003022!4.19e-08!2;UBERON:0002421!4.19e-08!2;UBERON:0002600!4.19e-08!2;UBERON:0000349!7.12e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.89e-15;3!UBERON:0000043;1.89e-15;3!UBERON:0007845;1.89e-15;3!UBERON:0006915;5.49e-15;3!UBERON:0007616;5.49e-15;3!UBERON:0002217;5.49e-15;3!UBERON:0002018;5.49e-15;3!UBERON:0001282;1.32e-11;1!UBERON:0009842;1.32e-11;1!UBERON:0003704;1.32e-11;1!UBERON:0001171;1.32e-11;1!UBERON:0001172;1.32e-11;1!UBERON:0002371;1.79e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.95e-15,3;UBERON:0000043,1.95e-15,3;UBERON:0007845,1.95e-15,3;UBERON:0006915,5.68e-15,3;UBERON:0007616,5.68e-15,3;UBERON:0002217,5.68e-15,3;UBERON:0002018,5.68e-15,3;UBERON:0001282,1.07e-11,1;UBERON:0009842,1.07e-11,1;UBERON:0003704,1.07e-11,1;UBERON:0001171,1.07e-11,1;UBERON:0001172,1.07e-11,1;UBERON:0002384,1.05e-07,371;UBERON:0001434,3.30e-07,100 | |||
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| ||
|short_description=p15@CHI3L1 | |||
}} | }} |
Latest revision as of 22:15, 19 September 2015
Short description: | p15@CHI3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CHI3L1_5end |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | 60bp_to_ENST00000472064_5end |
EntrezGene: | CHI3L1 |
HGNC: | 1932 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.47e-41 | 9 |
carbohydrate secreting cell | 1.47e-41 | 9 |
chondroblast | 2.51e-28 | 6 |
chondrocyte | 2.51e-28 | 6 |
macrophage | 8.26e-28 | 6 |
extracellular matrix secreting cell | 7.60e-25 | 15 |
stromal cell | 2.87e-23 | 28 |
mesenchymal stem cell of the bone marrow | 2.11e-16 | 6 |
fibrocyte | 1.95e-15 | 3 |
tendon cell | 1.95e-15 | 3 |
synovial cell | 5.68e-15 | 3 |
secretory cell | 3.78e-10 | 36 |
bone marrow cell | 4.52e-10 | 10 |
mesenchymal cell | 3.33e-08 | 354 |
connective tissue cell | 5.41e-08 | 361 |
motile cell | 2.99e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.95e-15 | 3 |
tendon | 1.95e-15 | 3 |
regular connective tissue | 1.95e-15 | 3 |
stratified squamous epithelium | 5.68e-15 | 3 |
layer of synovial tissue | 5.68e-15 | 3 |
synovial joint | 5.68e-15 | 3 |
synovial membrane of synovial joint | 5.68e-15 | 3 |
intralobular bile duct | 1.07e-11 | 1 |
acinus | 1.07e-11 | 1 |
intrahepatic bile duct | 1.07e-11 | 1 |
portal lobule | 1.07e-11 | 1 |
hepatic acinus | 1.07e-11 | 1 |
connective tissue | 1.05e-07 | 371 |
skeletal system | 3.30e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 9.61e-12 | 1 |