FFCP PHASE1:Hg19::chr1:203149716..203149729,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:203149716..203149729,-
|short_description=p19@CHI3L1
|description=CAGE_peak_19_at_CHI3L1_5end
|association_with_transcript=-455bp_to_ENST00000478742_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1116 | |EntrezGene=1116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1932 | |HGNC=1932 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-455bp_to_ENST00000478742_5end | |||
|cluster_id=chr1:203149716..203149729,- | |||
|coexpression_cluster_id=C283 | |||
|description=CAGE_peak_19_at_CHI3L1_5end | |||
|id=chr1:203149716..203149729,- | |||
|ontology_enrichment_celltype=CL:0000153!6.06e-24!9;CL:0000447!6.06e-24!9;CL:0000667!5.90e-19!6;CL:0000058!5.90e-19!6;CL:0000138!5.90e-19!6;CL:0000499!7.29e-18!27;CL:0000327!5.07e-15!14;CL:0000135!2.88e-14!3;CL:0000386!2.88e-14!3;CL:0000388!2.88e-14!3;CL:0000151!1.21e-08!35;CL:0000235!2.71e-07!10;CL:0002540!2.75e-07!6;CL:0000214!6.15e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000153;9.76e-63;9!CL:0000447;9.76e-63;9!CL:0000138;7.46e-49;6!CL:0000327;1.69e-37;15!CL:0000499;6.22e-33;28!CL:0000235;3.41e-18;6!CL:0000135;4.17e-17;3!CL:0000388;4.17e-17;3!CL:0000214;2.57e-16;3!CL:0000151;1.95e-12;36!CL:0002540;8.08e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,4.90e-63,9;CL:0000447,4.90e-63,9;CL:0000058,5.83e-49,6;CL:0000138,5.83e-49,6;CL:0000327,1.12e-37,15;CL:0000499,4.69e-33,28;CL:0000235,3.96e-18,6;CL:0000135,4.17e-17,3;CL:0000388,4.17e-17,3;CL:0000214,1.74e-16,3;CL:0000151,2.10e-15,36;CL:0002540,7.33e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.10e-10;11!UBERON:0009497;1.47e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;7.24e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,8.64e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0000043!2.88e-14!3;UBERON:0006915!6.15e-07!3;UBERON:0002018!6.15e-07!3;UBERON:0002217!6.15e-07!3;UBERON:0007616!6.15e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.17e-17;3!UBERON:0000043;4.17e-17;3!UBERON:0007845;4.17e-17;3!UBERON:0006915;2.57e-16;3!UBERON:0007616;2.57e-16;3!UBERON:0002217;2.57e-16;3!UBERON:0002018;2.57e-16;3!UBERON:0001282;7.24e-13;1!UBERON:0009842;7.24e-13;1!UBERON:0003704;7.24e-13;1!UBERON:0001171;7.24e-13;1!UBERON:0001172;7.24e-13;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.17e-17,3;UBERON:0000043,4.17e-17,3;UBERON:0007845,4.17e-17,3;UBERON:0006915,1.74e-16,3;UBERON:0007616,1.74e-16,3;UBERON:0002217,1.74e-16,3;UBERON:0002018,1.74e-16,3;UBERON:0001282,1.09e-12,1;UBERON:0009842,1.09e-12,1;UBERON:0003704,1.09e-12,1;UBERON:0001171,1.09e-12,1;UBERON:0001172,1.09e-12,1;UBERON:0004905,9.66e-07,8;UBERON:0000982,9.66e-07,8;UBERON:0004770,9.66e-07,8 | |||
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| ||
|short_description=p19@CHI3L1 | |||
}} | }} |
Latest revision as of 22:10, 19 September 2015
Short description: | p19@CHI3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_CHI3L1_5end |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | -455bp_to_ENST00000478742_5end |
EntrezGene: | CHI3L1 |
HGNC: | 1932 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 4.90e-63 | 9 |
carbohydrate secreting cell | 4.90e-63 | 9 |
chondroblast | 5.83e-49 | 6 |
chondrocyte | 5.83e-49 | 6 |
extracellular matrix secreting cell | 1.12e-37 | 15 |
stromal cell | 4.69e-33 | 28 |
macrophage | 3.96e-18 | 6 |
fibrocyte | 4.17e-17 | 3 |
tendon cell | 4.17e-17 | 3 |
synovial cell | 1.74e-16 | 3 |
secretory cell | 2.10e-15 | 36 |
mesenchymal stem cell of the bone marrow | 7.33e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 4.17e-17 | 3 |
tendon | 4.17e-17 | 3 |
regular connective tissue | 4.17e-17 | 3 |
stratified squamous epithelium | 1.74e-16 | 3 |
layer of synovial tissue | 1.74e-16 | 3 |
synovial joint | 1.74e-16 | 3 |
synovial membrane of synovial joint | 1.74e-16 | 3 |
intralobular bile duct | 1.09e-12 | 1 |
acinus | 1.09e-12 | 1 |
intrahepatic bile duct | 1.09e-12 | 1 |
portal lobule | 1.09e-12 | 1 |
hepatic acinus | 1.09e-12 | 1 |
articulation | 9.66e-07 | 8 |
skeletal joint | 9.66e-07 | 8 |
articular system | 9.66e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 8.64e-13 | 1 |