FFCP PHASE1:Hg19::chr1:201979508..201979529,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:201979508..201979529,-
|short_description=p2@ENST00000419190
|description=CAGE_peak_2_at_ENST00000419190_5end
|association_with_transcript=-27bp_to_ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_ENST00000419190_5end | |||
|cluster_id=chr1:201979508..201979529,- | |||
|description=CAGE_peak_2_at_ENST00000419190_5end | |||
|id=chr1:201979508..201979529,- | |||
|ontology_enrichment_celltype=CL:0000066!2.71e-21!254;CL:0000039!1.15e-09!7;CL:0000586!1.15e-09!7;CL:0000223!6.32e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.14e-15;7!CL:0000586;3.14e-15;7!CL:0002553;3.31e-08;1!CL:0000167;1.07e-07;1!CL:0000164;1.07e-07;1!CL:0000502;1.07e-07;1!CL:0000172;1.07e-07;1!CL:0000173;1.07e-07;1!CL:0000083;2.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.27e-15,7;CL:0000586,3.27e-15,7;CL:0002553,3.55e-08,1;CL:0000167,1.64e-07,1;CL:0000164,1.64e-07,1;CL:0000502,1.64e-07,1;CL:0000172,1.64e-07,1;CL:0000173,1.64e-07,1;CL:0002351,1.64e-07,1;CL:0000083,2.35e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002351;1.07e-07;1!UBERON:0003124;1.07e-07;1 | |||
|ontology_enrichment_disease=DOID:305!9.07e-44!106;DOID:0050687!1.53e-33!143;DOID:162!4.70e-19!235;DOID:14566!3.97e-18!239;DOID:1749!3.37e-13!14;DOID:0050615!8.33e-08!16;DOID:7!1.17e-07!39;DOID:299!1.63e-07!25;DOID:1324!9.80e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:0050619;4.65e-08;1!DOID:1357;4.65e-08;1!DOID:1799;1.07e-07;1!DOID:10165;1.07e-07;1!DOID:1798;1.07e-07;1!DOID:4430;1.07e-07;1!DOID:1793;2.75e-07;4!DOID:3095;3.13e-07;22!DOID:2994;3.13e-07;22!DOID:0050615;5.83e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,9.48e-10,143;DOID:305,2.43e-09,106;DOID:0050619,4.07e-08,1;DOID:1357,4.07e-08,1;DOID:162,4.98e-08,235;DOID:14566,8.93e-08,239;DOID:1799,1.35e-07,1;DOID:10165,1.35e-07,1;DOID:1798,1.35e-07,1;DOID:4430,1.64e-07,1;DOID:1793,2.35e-07,4;DOID:3095,3.47e-07,22;DOID:2994,3.47e-07,22;DOID:0050615,5.83e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001007!9.03e-19!155;UBERON:0001555!9.03e-19!155;UBERON:0007026!9.03e-19!155;UBERON:0004921!1.57e-18!129;UBERON:0004185!1.57e-18!129;UBERON:0004119!6.71e-18!169;UBERON:0000925!6.71e-18!169;UBERON:0006595!6.71e-18!169;UBERON:0000077!8.31e-16!130;UBERON:0001041!6.64e-13!98;UBERON:0008947!1.13e-11!38;UBERON:0003258!1.13e-11!38;UBERON:0001004!4.25e-11!72;UBERON:0000072!1.64e-10!46;UBERON:0000065!6.93e-10!53;UBERON:0005911!9.08e-09!82;UBERON:0001737!3.26e-08!9;UBERON:0000466!6.68e-08!126;UBERON:0005153!3.20e-07!37;UBERON:0003104!4.66e-07!238;UBERON:0009142!4.66e-07!238;UBERON:0001557!5.70e-07!19;UBERON:0005156!6.04e-07!59;UBERON:0000990!6.04e-07!59;UBERON:0000464!6.06e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;1.04e-13;2!UBERON:0001764;4.65e-08;1!UBERON:0001825;4.65e-08;1!UBERON:0003343;1.56e-07;4!UBERON:0004785;1.56e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,8.60e-14,2;UBERON:0001764,4.07e-08,1;UBERON:0001825,4.07e-08,1;UBERON:0003343,2.00e-07,4;UBERON:0004785,2.00e-07,4 | |||
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| ||
|short_description=p2@ENST00000419190 | |||
}} | }} |
Latest revision as of 02:14, 28 July 2015
Short description: | p2@ENST00000419190 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000419190_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENST00000419190_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.27e-15 | 7 |
germ cell | 3.27e-15 | 7 |
lung fibroblast | 3.55e-08 | 1 |
peptide hormone secreting cell | 1.64e-07 | 1 |
enteroendocrine cell | 1.64e-07 | 1 |
type D enteroendocrine cell | 1.64e-07 | 1 |
somatostatin secreting cell | 1.64e-07 | 1 |
pancreatic D cell | 1.64e-07 | 1 |
progenitor cell of endocrine pancreas | 1.64e-07 | 1 |
epithelial cell of pancreas | 2.35e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 8.60e-14 | 2 |
maxillary sinus | 4.07e-08 | 1 |
paranasal sinus | 4.07e-08 | 1 |
mucosa of oral region | 2.00e-07 | 4 |
respiratory system mucosa | 2.00e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 9.48e-10 | 143 |
carcinoma | 2.43e-09 | 106 |
paranasal sinus cancer | 4.07e-08 | 1 |
maxillary sinus cancer | 4.07e-08 | 1 |
cancer | 4.98e-08 | 235 |
disease of cellular proliferation | 8.93e-08 | 239 |
islet cell tumor | 1.35e-07 | 1 |
endocrine pancreas cancer | 1.35e-07 | 1 |
pancreatic endocrine carcinoma | 1.35e-07 | 1 |
somatostatinoma | 1.64e-07 | 1 |
pancreatic cancer | 2.35e-07 | 4 |
germ cell and embryonal cancer | 3.47e-07 | 22 |
germ cell cancer | 3.47e-07 | 22 |
respiratory system cancer | 5.83e-07 | 16 |