FFCP PHASE1:Hg19::chr1:201159914..201159958,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:201159914..201159958,+
|short_description=p1@IGFN1
|description=CAGE_peak_1_at_IGFN1_5end
|association_with_transcript=0bp_to_ENST00000295591,ENST000003352...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91156 | |EntrezGene=91156 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24607 | |HGNC=24607 | ||
|TSSclassifier=strong | |||
|UniProt=B7WP51,F8WAI1,Q86VF2 | |UniProt=B7WP51,F8WAI1,Q86VF2 | ||
|association_with_transcript=0bp_to_ENST00000295591,ENST00000335211,ENST00000437879,ENST00000451870,NM_001164586,uc001gwb.2_5end | |||
|cluster_id=chr1:201159914..201159958,+ | |||
|coexpression_cluster_id=C1256 | |||
|description=CAGE_peak_1_at_IGFN1_5end | |||
|id=chr1:201159914..201159958,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002149;3.27e-10;6!CL:0002255;3.27e-10;6!CL:0000056;6.76e-10;4!CL:0000515;6.54e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,3.41e-10,6;CL:0002255,3.41e-10,6;CL:0000515,6.25e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.00e-12;5!CL:0000515;6.76e-10;4 | |||
|ontology_enrichment_disease=DOID:120!6.51e-09!27;DOID:0050687!4.50e-08!143;DOID:193!6.81e-08!29;DOID:14566!3.44e-07!239;DOID:162!5.17e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:3001;3.27e-10;6!DOID:120;3.30e-10;27!DOID:193;2.59e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,3.41e-10,6;DOID:120,3.42e-10,27;DOID:193,2.67e-09,29;DOID:162,5.05e-07,235 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;4.00e-12;5!UBERON:0001134;1.25e-08;16!UBERON:0002036;1.25e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,3.32e-12,5;UBERON:0004117,3.32e-12,5;UBERON:0007689,3.32e-12,5;UBERON:0007123,3.32e-12,5;UBERON:0003091,3.32e-12,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0,0,0.61560529038394,0.204000691244253,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0.545812300115692,0,0,0,0,0,0,0,0.580418477257168,2.26954089876456,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,0.221729397462564,0.351339142772504,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.756787138224657,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,13.5080597020506,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,8.23525489432923,0,0,0.100528972411631,0,0,0,0,0.34779121492523,0,0,0,0,0.790204397959275,0,0,0.468008530278475,0.445893486866185,0.93733833986777,0,0,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,2.24262168690721,1.74384027533312,0.66004457238855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,2.85273810081437,2.02693829334611,4.9314317412092,5.37182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0,0.35142424497814,0,0,0,0,0,0,10.573262502988,0.343143423810856,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0.177561725313127,0,0,0.232420756919918,0,0,0,0,0,0,1.35359883872224,2.0794141018192,0,0,0,0,0,0,0,0,0,1.27438136522519,1.66215201785745,0.671624264166535,0,0,1.02580050046556,0,0,0.309123034943167,0.0915694648183434,0.247528499761764,0,0,0,1.54673149267395,0.462145851343933,0.460511024178389,0.551346289938122,0,0,0.596586391912706,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,7.44316738719335,2.84741482246853,0.571890581771475,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12856638442359,0,0,0,0,0.288666338176536,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,71.9994239399169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0.111443384277478,0,0,0,0,0,0.140669416410513,1.66963057534359,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,1.72371686620732,0,0.694499979733169,0,0,0,0.552896299656123,0,1.53569778007781,0,0,0.230850775511391,0,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0,137.570738072274,7.01901075084335,0,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,234.352673011246,0,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,200.365120404974,1.52542140314453,0.173559738335131,0,0.0870592065804026,4.71762004253481,0,0.19351266257817,0.219267951258557,0.164230914106418,0,0,1.12990370390266,0,15.6984543245362,0.189932387867636,1.56441106187842,7.29445264288957,0,0,0,0,0,0,4.22458620922471,0,44.1688669739246,50.5231747688569,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0.408610218334727,0,0,0,0,0,0.121499113316049,0.335434687599266,0.236417121897595,0.157363764404994,0,8.06793026997802,0,0,0,256.302685955988,0,0,0,0,0.164185041498678,0.681552087141687,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,4.21530395840039,1.05563885000352,0.691743174681154,0,0.606596470166591,0.570930667089935,1.6468607378872,0,0,0,0.233713309847224,0.554805861502613,0.189403005275089,0,0.889811221596536,0,0.604923695052956,0,0,0.318593534327405,1.79921244865442,2.01841843939137,0,0.265841714557995,4.69570555630561,0,1.14241563650639,0.406870733204662,0.181848659202559,3.22231671127465,0,0.398095888698616,0,0,0,0,0,0,2.60994291965212,53.275892495384,0,0,0,0,0,0.176689145945881,0.38582807654183,5.23721566024525,318.764449123406,12.4354923023231,0,0,0,0,0,0.982829546539238,67.3417769985191,0,0,0.106691729694141,0,0,0.368211900503681,0.559518030877778,0,0,0,1.25812753484717,0.655257829152084,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0.392590874004102,0,0,0,0,2.0710797781803,0,0.300841313397029,27.2301842749752,0,0,1.31017534008077,1.03499260351932,0.135075169236789,0,0,0.253663240775627,0,0,19.8484471355718,2.28632617667507,0,0,2.69026977775059,0.606965604236632,1.13831095675649,0,0,0,0,0.131545547125698,0,0,0.156986185701028,0,1.12108865325516,0,239.895553843888,77.8735251255892,3.35939757630285,0,0.116241425368125,0.521574816907738,0,0,0,0,0,0.354996002191696,0.852134047591577,0,1.14553434272025,44.6697195356621,27.7106292303456,0,0.098150233615243,0,9.06400372063053,249.265295046968,0,0.485710993059139,0,0.397901550322736,0,1.1294608203896,0.879524133963433,24.6069435013678,0,0,3.76253837089218,0,0.235676547101626,0,0,0.4226557275834,0,0,0,0,0.71421575442263,46.5821230664713,0,0,0,0.430018749454354,0,0.271965960763659,0,6.34832208618481,0,0,0,0,0,0,0,0,0,0,0.909344378618873,1.60778478093707,0,0.103432995861895,19.8307603167912,1.90451545170992,0,0.372448285775147,50.9078656115985,12.0929600728513,18.1905470062397,0.435433495793923,0,0.471464371102113,0.143444410785353,0.99798106963804,0,1.81436487992116,0,0,0,3.17827754875453,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0,0,0,0,0.61560529038394,0.204000691244253,0.313454721478088,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0.545812300115692,0,0,0,0,0,0,0,0.580418477257168,2.26954089876456,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,0.221729397462564,0.351339142772504,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.756787138224657,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15956511897978,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,13.5080597020506,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,8.23525489432923,0,0,0.100528972411631,0,0,0,0,0.34779121492523,0,0,0,0,0.790204397959275,0,0,0.468008530278475,0.445893486866185,0.93733833986777,0,0,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,2.24262168690721,1.74384027533312,0.66004457238855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,2.85273810081437,2.02693829334611,4.9314317412092,5.37182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0,0.35142424497814,0,0,0,0,0,0,10.573262502988,0.343143423810856,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0.177561725313127,0,0,0.232420756919918,0,0,0,0,0,0,1.35359883872224,2.0794141018192,0,0,0,0,0,0,0,0,0,1.27438136522519,1.66215201785745,0.671624264166535,0,0,1.02580050046556,0,0,0.309123034943167,0.0915694648183434,0.247528499761764,0,0,0,1.54673149267395,0.462145851343933,0.460511024178389,0.551346289938122,0,0,0.596586391912706,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,7.44316738719335,2.84741482246853,0.571890581771475,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12856638442359,0,0,0,0,0.288666338176536,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,71.9994239399169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0.111443384277478,0,0,0,0,0,0.140669416410513,1.66963057534359,0,0.211125408127993,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0,0,1.72371686620732,0,0.694499979733169,0,0,0,0.552896299656123,0,1.53569778007781,0,0,0.230850775511391,0,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0,137.570738072274,7.01901075084335,0,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,234.352673011246,0,0,0,0,0,0,0,0.758238955541855,0,0,0,0,0,0,200.365120404974,1.52542140314453,0.173559738335131,0,0.0870592065804026,4.71762004253481,0,0.19351266257817,0.219267951258557,0.164230914106418,0,0,1.12990370390266,0,15.6984543245362,0.189932387867636,1.56441106187842,7.29445264288957,0,0,0,0,0,0,4.22458620922471,0,44.1688669739246,50.5231747688569,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0.408610218334727,0,0,0,0,0,0.121499113316049,0.335434687599266,0.236417121897595,0.157363764404994,0,8.06793026997802,0,0,0,256.302685955988,0,0,0,0,0.164185041498678,0.681552087141687,0.113312091520126,0,0,0.129282956361551,0.26446520348538,0.171086837884329,0,0,0,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0.573409195690071,4.21530395840039,1.05563885000352,0.691743174681154,0,0.606596470166591,0.570930667089935,1.6468607378872,0,0,0,0.233713309847224,0.554805861502613,0.189403005275089,0,0.889811221596536,0,0.604923695052956,0,0,0.318593534327405,1.79921244865442,2.01841843939137,0,0.265841714557995,4.69570555630561,0,1.14241563650639,0.406870733204662,0.181848659202559,3.22231671127465,0,0.398095888698616,0,0,0,0,0,0,2.60994291965212,53.275892495384,0,0,0,0,0,0.176689145945881,0.38582807654183,5.23721566024525,318.764449123406,12.4354923023231,0,0,0,0,0,0.982829546539238,67.3417769985191,0,0,0.106691729694141,0,0,0.368211900503681,0.559518030877778,0,0,0,1.25812753484717,0.655257829152084,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0.392590874004102,0,0,0,0,2.0710797781803,0,0.300841313397029,27.2301842749752,0,0,1.31017534008077,1.03499260351932,0.135075169236789,0,0,0.253663240775627,0,0,19.8484471355718,2.28632617667507,0,0,2.69026977775059,0.606965604236632,1.13831095675649,0,0,0,0,0.131545547125698,0,0,0.156986185701028,0,1.12108865325516,0,239.895553843888,77.8735251255892,3.35939757630285,0,0.116241425368125,0.521574816907738,0,0,0,0,0,0.354996002191696,0.852134047591577,0,1.14553434272025,44.6697195356621,27.7106292303456,0,0.098150233615243,0,9.06400372063053,249.265295046968,0,0.485710993059139,0,0.397901550322736,0,1.1294608203896,0.879524133963433,24.6069435013678,0,0,3.76253837089218,0,0.235676547101626,0,0,0.4226557275834,0,0,0,0,0.71421575442263,46.5821230664713,0,0,0,0.430018749454354,0,0.271965960763659,0,6.34832208618481,0,0,0,0,0,0,0,0,0,0,0.909344378618873,1.60778478093707,0,0.103432995861895,19.8307603167912,1.90451545170992,0,0.372448285775147,50.9078656115985,12.0929600728513,18.1905470062397,0.435433495793923,0,0.471464371102113,0.143444410785353,0.99798106963804,0,1.81436487992116,0,0,0,3.17827754875453,0.406896178315738,0,0,0 | ||
|short_description=p1@IGFN1 | |||
}} | }} |
Latest revision as of 17:02, 19 September 2015
Short description: | p1@IGFN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGFN1_5end |
Coexpression cluster: | C1256_mesothelioma_leiomyoblastoma_diaphragm_skeletal_renal_endometrial_clear |
Association with transcript: | 0bp_to_ENST00000295591, ENST00000335211, ENST00000437879, ENST00000451870, NM_001164586, uc001gwb.2_5end |
EntrezGene: | IGFN1 |
HGNC: | 24607 |
UniProt: | B7WP51F8WAI1Q86VF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 3.41e-10 | 6 |
stromal cell of endometrium | 3.41e-10 | 6 |
skeletal muscle myoblast | 6.25e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 3.32e-12 | 5 |
pharyngeal pouch | 3.32e-12 | 5 |
thyroid diverticulum | 3.32e-12 | 5 |
pharyngeal pouch 2 | 3.32e-12 | 5 |
thyroid primordium | 3.32e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 3.41e-10 | 6 |
female reproductive organ cancer | 3.42e-10 | 27 |
reproductive organ cancer | 2.67e-09 | 29 |
cancer | 5.05e-07 | 235 |