FFCP PHASE1:Hg19::chr1:201159887..201159896,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:201159887..201159896,+
|short_description=p2@IGFN1
|description=CAGE_peak_2_at_IGFN1_5end
|association_with_transcript=-56bp_to_ENST00000295591,ENST0000033...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=91156 | |EntrezGene=91156 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24607 | |HGNC=24607 | ||
|TSSclassifier=strong | |||
|UniProt=B7WP51,F8WAI1,Q86VF2 | |UniProt=B7WP51,F8WAI1,Q86VF2 | ||
|association_with_transcript=-56bp_to_ENST00000295591,ENST00000335211,ENST00000437879,ENST00000451870,NM_001164586,uc001gwb.2_5end | |||
|cluster_id=chr1:201159887..201159896,+ | |||
|coexpression_cluster_id=C1256 | |||
|description=CAGE_peak_2_at_IGFN1_5end | |||
|id=chr1:201159887..201159896,+ | |||
|ontology_enrichment_celltype=CL:0002149!6.19e-11!6;CL:0002255!6.19e-11!6;CL:0000515!2.89e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0000319;7.35e-12;1!CL:0002149;7.58e-08;6!CL:0002255;7.58e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,6.97e-12,1;CL:0002149,6.38e-08,6;CL:0002255,6.38e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.93e-17;10!UBERON:0007687;1.93e-17;10!UBERON:0007123;3.04e-09;5!UBERON:0003104;5.74e-08;31 | |||
|ontology_enrichment_disease=DOID:3001!6.19e-11!6;DOID:4468!4.60e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:3030;7.35e-12;1!DOID:0060085;1.39e-11;1!DOID:3165;1.39e-11;1!DOID:0060121;1.39e-11;1!DOID:2438;1.39e-11;1!DOID:4418;1.39e-11;1!DOID:3001;7.58e-08;6!DOID:299;5.82e-07;25!DOID:4468;8.93e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,6.97e-12,1;DOID:0060085,1.32e-11,1;DOID:3165,1.32e-11,1;DOID:0060121,1.32e-11,1;DOID:2438,1.32e-11,1;DOID:4418,1.32e-11,1;DOID:3001,6.38e-08,6;DOID:299,5.33e-07,25;DOID:4468,8.93e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002046!6.31e-08!5;UBERON:0004117!6.31e-08!5;UBERON:0007689!6.31e-08!5;UBERON:0007123!6.31e-08!5;UBERON:0003091!6.31e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;4.78e-12;1!UBERON:0003831;4.78e-12;1!UBERON:0003898;4.78e-12;1!UBERON:0004830;4.78e-12;1!UBERON:0003830;4.78e-12;1!UBERON:0005175;4.78e-12;1!UBERON:0001774;4.78e-12;1!UBERON:0001103;4.78e-12;1!UBERON:0002046;3.04e-09;5!UBERON:0002113;2.22e-07;24!UBERON:0011143;2.22e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,5.05e-12,1;UBERON:0003831,5.05e-12,1;UBERON:0003898,5.05e-12,1;UBERON:0004830,5.05e-12,1;UBERON:0003830,5.05e-12,1;UBERON:0005175,5.05e-12,1;UBERON:0001774,5.05e-12,1;UBERON:0001103,5.05e-12,1;UBERON:0010084,5.05e-12,1;UBERON:0002046,2.91e-09,5;UBERON:0004117,2.91e-09,5;UBERON:0007689,2.91e-09,5;UBERON:0007123,2.91e-09,5;UBERON:0003091,2.91e-09,5;UBERON:0002113,8.14e-07,26;UBERON:0003918,8.14e-07,26;UBERON:0011143,8.14e-07,26;UBERON:0005095,8.14e-07,26;UBERON:0007687,8.14e-07,26 | |||
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| ||
|short_description=p2@IGFN1 | |||
}} | }} |
Latest revision as of 17:01, 19 September 2015
Short description: | p2@IGFN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IGFN1_5end |
Coexpression cluster: | C1256_mesothelioma_leiomyoblastoma_diaphragm_skeletal_renal_endometrial_clear |
Association with transcript: | -56bp_to_ENST00000295591, ENST00000335211, ENST00000437879, ENST00000451870, NM_001164586, uc001gwb.2_5end |
EntrezGene: | IGFN1 |
HGNC: | 24607 |
UniProt: | B7WP51F8WAI1Q86VF2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 6.97e-12 | 1 |
epithelial cell of uterus | 6.38e-08 | 6 |
stromal cell of endometrium | 6.38e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 5.05e-12 | 1 |
respiratory system muscle | 5.05e-12 | 1 |
skeletal muscle of trunk | 5.05e-12 | 1 |
respiratory system skeletal muscle | 5.05e-12 | 1 |
thoracic segment muscle | 5.05e-12 | 1 |
chest organ | 5.05e-12 | 1 |
muscle of trunk | 5.05e-12 | 1 |
diaphragm | 5.05e-12 | 1 |
future diaphragm | 5.05e-12 | 1 |
thyroid gland | 2.91e-09 | 5 |
pharyngeal pouch | 2.91e-09 | 5 |
thyroid diverticulum | 2.91e-09 | 5 |
pharyngeal pouch 2 | 2.91e-09 | 5 |
thyroid primordium | 2.91e-09 | 5 |
kidney | 8.14e-07 | 26 |
kidney mesenchyme | 8.14e-07 | 26 |
upper urinary tract | 8.14e-07 | 26 |
kidney rudiment | 8.14e-07 | 26 |
kidney field | 8.14e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 6.97e-12 | 1 |
organ system benign neoplasm | 1.32e-11 | 1 |
skin benign neoplasm | 1.32e-11 | 1 |
integumentary system benign neoplasm | 1.32e-11 | 1 |
dermis tumor | 1.32e-11 | 1 |
cutaneous fibrous histiocytoma | 1.32e-11 | 1 |
female reproductive endometrioid cancer | 6.38e-08 | 6 |
adenocarcinoma | 5.33e-07 | 25 |
clear cell adenocarcinoma | 8.93e-07 | 2 |