FFCP PHASE1:Hg19::chr12:122281697..122281708,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:122281697..122281708,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr12:122281697..122281708,- | |description=CAGE_peak_at_chr12:122281697..122281708,- | ||
|id=chr12:122281697..122281708,- | |id=chr12:122281697..122281708,- | ||
|ontology_enrichment_celltype=CL:0000181!2.36e-22!12;CL:0000417!2.36e-22!12;CL:0000668!2.36e-22!12;CL:0000414!2.36e-22!12;CL:0000412!2.36e-22!12;CL:0000182!2.36e-22!12 | |ontology_enrichment_celltype=CL:0000181!2.36e-22!12;CL:0000417!2.36e-22!12;CL:0000668!2.36e-22!12;CL:0000414!2.36e-22!12;CL:0000412!2.36e-22!12;CL:0000182!2.36e-22!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.71e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.84e-14,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.50e-19!19;UBERON:0006925!6.50e-19!19;UBERON:0008836!6.50e-19!19;UBERON:0005057!1.59e-17!26;UBERON:0008835!3.16e-16!22;UBERON:0003894!3.16e-16!22;UBERON:0009854!1.74e-15!23;UBERON:0007499!3.49e-14!25;UBERON:0009497!3.49e-14!25;UBERON:0000015!3.49e-14!25;UBERON:0002423!3.49e-14!25;UBERON:0006235!3.49e-14!25;UBERON:0004161!3.49e-14!25;UBERON:0009856!1.32e-13!26;UBERON:0002368!9.78e-13!35;UBERON:0005172!4.88e-12!55;UBERON:0005173!4.88e-12!55;UBERON:0002365!2.80e-11!31;UBERON:0002330!2.80e-11!31;UBERON:0001896!5.69e-11!3;UBERON:0005290!5.69e-11!3;UBERON:0010096!5.69e-11!3;UBERON:0002417!1.08e-10!61;UBERON:0000916!1.08e-10!61;UBERON:0000949!1.17e-09!45;UBERON:0003929!7.28e-08!54;UBERON:0002530!4.19e-07!59 | |ontology_enrichment_uberon=UBERON:0002107!6.50e-19!19;UBERON:0006925!6.50e-19!19;UBERON:0008836!6.50e-19!19;UBERON:0005057!1.59e-17!26;UBERON:0008835!3.16e-16!22;UBERON:0003894!3.16e-16!22;UBERON:0009854!1.74e-15!23;UBERON:0007499!3.49e-14!25;UBERON:0009497!3.49e-14!25;UBERON:0000015!3.49e-14!25;UBERON:0002423!3.49e-14!25;UBERON:0006235!3.49e-14!25;UBERON:0004161!3.49e-14!25;UBERON:0009856!1.32e-13!26;UBERON:0002368!9.78e-13!35;UBERON:0005172!4.88e-12!55;UBERON:0005173!4.88e-12!55;UBERON:0002365!2.80e-11!31;UBERON:0002330!2.80e-11!31;UBERON:0001896!5.69e-11!3;UBERON:0005290!5.69e-11!3;UBERON:0010096!5.69e-11!3;UBERON:0002417!1.08e-10!61;UBERON:0000916!1.08e-10!61;UBERON:0000949!1.17e-09!45;UBERON:0003929!7.28e-08!54;UBERON:0002530!4.19e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.63e-19;19!UBERON:0006925;1.63e-19;19!UBERON:0002423;4.73e-15;25!UBERON:0002365;1.09e-12;31!UBERON:0002330;1.09e-12;31!UBERON:0002368;9.87e-10;33!UBERON:0000949;1.87e-08;43!UBERON:0005172;6.81e-07;52!UBERON:0005173;6.81e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.68e-19,19;UBERON:0006925,1.68e-19,19;UBERON:0008836,1.68e-19,19;UBERON:0008835,5.72e-17,22;UBERON:0003894,5.72e-17,22;UBERON:0009854,2.85e-16,23;UBERON:0007499,4.84e-15,25;UBERON:0009497,4.84e-15,25;UBERON:0000015,4.84e-15,25;UBERON:0002423,4.84e-15,25;UBERON:0006235,4.84e-15,25;UBERON:0004161,4.84e-15,25;UBERON:0009856,1.70e-14,26;UBERON:0002365,2.68e-12,31;UBERON:0002330,2.68e-12,31;UBERON:0002368,5.49e-11,35;UBERON:0000949,1.01e-08,45;UBERON:0003929,2.17e-07,54;UBERON:0005172,2.17e-07,54;UBERON:0005173,2.17e-07,54;UBERON:0002530,8.00e-07,59 | |||
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|short_description=p@chr12:122281697..122281708,- | |short_description=p@chr12:122281697..122281708,- | ||
}} | }} |
Latest revision as of 06:01, 24 July 2015
Short description: | p@chr12:122281697..122281708, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:122281697..122281708, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.84e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.68e-19 | 19 |
digestive gland | 1.68e-19 | 19 |
liver bud | 1.68e-19 | 19 |
hepatic diverticulum | 5.72e-17 | 22 |
liver primordium | 5.72e-17 | 22 |
digestive tract diverticulum | 2.85e-16 | 23 |
epithelial sac | 4.84e-15 | 25 |
epithelium of foregut-midgut junction | 4.84e-15 | 25 |
anatomical boundary | 4.84e-15 | 25 |
hepatobiliary system | 4.84e-15 | 25 |
foregut-midgut junction | 4.84e-15 | 25 |
septum transversum | 4.84e-15 | 25 |
sac | 1.70e-14 | 26 |
exocrine gland | 2.68e-12 | 31 |
exocrine system | 2.68e-12 | 31 |
endocrine gland | 5.49e-11 | 35 |
endocrine system | 1.01e-08 | 45 |
gut epithelium | 2.17e-07 | 54 |
abdomen element | 2.17e-07 | 54 |
abdominal segment element | 2.17e-07 | 54 |
gland | 8.00e-07 | 59 |