FFCP PHASE1:Hg19::chr8:3326758..3326769,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64478 | |EntrezGene=64478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14026 | |HGNC=14026 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-36bp_to_ENST00000524177_5end | |association_with_transcript=-36bp_to_ENST00000524177_5end | ||
|cluster_id=chr8:3326758..3326769,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_23_at_CSMD1_5end | |description=CAGE_peak_23_at_CSMD1_5end | ||
|id=chr8:3326758..3326769,- | |id=chr8:3326758..3326769,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.45e-12;3!UBERON:0006215;2.45e-12;3!UBERON:0003057;2.45e-12;3!UBERON:0006601;1.53e-11;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.33e-94!57;UBERON:0005068!2.33e-94!57;UBERON:0006241!2.33e-94!57;UBERON:0007135!2.33e-94!57;UBERON:0001017!2.47e-80!82;UBERON:0002616!7.43e-80!59;UBERON:0005743!2.28e-76!86;UBERON:0000955!6.47e-76!69;UBERON:0006238!6.47e-76!69;UBERON:0002780!7.61e-69!41;UBERON:0001890!7.61e-69!41;UBERON:0006240!7.61e-69!41;UBERON:0000073!1.21e-68!94;UBERON:0001016!1.21e-68!94;UBERON:0003080!4.08e-67!42;UBERON:0003075!1.27e-64!86;UBERON:0007284!1.27e-64!86;UBERON:0001893!4.11e-64!34;UBERON:0002020!6.20e-64!34;UBERON:0003528!6.20e-64!34;UBERON:0002346!1.76e-61!90;UBERON:0002791!4.33e-60!33;UBERON:0001869!1.49e-55!32;UBERON:0007023!1.86e-50!115;UBERON:0003056!7.51e-45!61;UBERON:0000033!6.97e-43!123;UBERON:0000153!1.33e-40!129;UBERON:0007811!1.33e-40!129;UBERON:0002619!2.11e-39!22;UBERON:0001950!2.06e-37!20;UBERON:0004121!1.19e-35!169;UBERON:0000924!1.11e-34!173;UBERON:0006601!1.11e-34!173;UBERON:0000956!1.65e-34!25;UBERON:0000203!1.65e-34!25;UBERON:0002308!1.84e-34!9;UBERON:0000125!1.84e-34!9;UBERON:0002298!1.63e-31!8;UBERON:0003076!6.12e-27!15;UBERON:0003057!6.12e-27!15;UBERON:0002420!2.81e-26!9;UBERON:0007245!2.81e-26!9;UBERON:0010009!2.81e-26!9;UBERON:0010011!2.81e-26!9;UBERON:0000454!2.81e-26!9;UBERON:0009663!2.59e-25!7;UBERON:0000025!2.79e-23!194;UBERON:0004733!9.59e-21!12;UBERON:0002028!9.59e-21!12;UBERON:0007277!9.59e-21!12;UBERON:0004732!4.47e-19!13;UBERON:0004111!2.08e-17!241;UBERON:0001896!9.83e-17!3;UBERON:0005290!9.83e-17!3;UBERON:0010096!9.83e-17!3;UBERON:0000988!3.78e-16!3;UBERON:0006331!4.19e-16!3;UBERON:0001871!2.66e-15!7;UBERON:0000477!1.05e-14!286;UBERON:0000200!7.17e-14!6;UBERON:0000483!4.20e-13!309;UBERON:0000119!6.57e-13!312;UBERON:0000064!6.19e-12!219;UBERON:0000475!7.47e-12!365;UBERON:0000369!1.85e-11!4;UBERON:0002435!1.85e-11!4;UBERON:0000204!1.85e-11!4;UBERON:0010082!1.85e-11!4;UBERON:0001897!2.57e-11!2;UBERON:0001875!3.00e-11!2;UBERON:0006514!3.00e-11!2;UBERON:0002148!4.76e-11!2;UBERON:0009662!4.76e-11!2;UBERON:0001872!1.03e-09!5;UBERON:0002680!1.65e-09!9;UBERON:0001895!1.65e-09!9;UBERON:0010092!1.65e-09!9;UBERON:0002021!1.75e-09!5;UBERON:0000349!3.34e-09!5;UBERON:0002240!6.35e-08!3;UBERON:0002771!8.34e-08!3;UBERON:0005383!1.86e-07!3;UBERON:0005382!1.86e-07!3;UBERON:0001894!5.04e-07!7;UBERON:0006222!5.04e-07!7;UBERON:0000062!5.39e-07!511;UBERON:0002038!9.30e-07!1;UBERON:0009661!9.30e-07!1;UBERON:0002336!9.81e-07!1;UBERON:0001018!9.81e-07!1;UBERON:0002473!9.81e-07!1;UBERON:0005340!9.81e-07!1;UBERON:0002316!9.81e-07!1;UBERON:0003544!9.81e-07!1;UBERON:0001020!9.81e-07!1;UBERON:0005970!9.81e-07!1;UBERON:0002437!9.81e-07!1 | |ontology_enrichment_uberon=UBERON:0001049!2.33e-94!57;UBERON:0005068!2.33e-94!57;UBERON:0006241!2.33e-94!57;UBERON:0007135!2.33e-94!57;UBERON:0001017!2.47e-80!82;UBERON:0002616!7.43e-80!59;UBERON:0005743!2.28e-76!86;UBERON:0000955!6.47e-76!69;UBERON:0006238!6.47e-76!69;UBERON:0002780!7.61e-69!41;UBERON:0001890!7.61e-69!41;UBERON:0006240!7.61e-69!41;UBERON:0000073!1.21e-68!94;UBERON:0001016!1.21e-68!94;UBERON:0003080!4.08e-67!42;UBERON:0003075!1.27e-64!86;UBERON:0007284!1.27e-64!86;UBERON:0001893!4.11e-64!34;UBERON:0002020!6.20e-64!34;UBERON:0003528!6.20e-64!34;UBERON:0002346!1.76e-61!90;UBERON:0002791!4.33e-60!33;UBERON:0001869!1.49e-55!32;UBERON:0007023!1.86e-50!115;UBERON:0003056!7.51e-45!61;UBERON:0000033!6.97e-43!123;UBERON:0000153!1.33e-40!129;UBERON:0007811!1.33e-40!129;UBERON:0002619!2.11e-39!22;UBERON:0001950!2.06e-37!20;UBERON:0004121!1.19e-35!169;UBERON:0000924!1.11e-34!173;UBERON:0006601!1.11e-34!173;UBERON:0000956!1.65e-34!25;UBERON:0000203!1.65e-34!25;UBERON:0002308!1.84e-34!9;UBERON:0000125!1.84e-34!9;UBERON:0002298!1.63e-31!8;UBERON:0003076!6.12e-27!15;UBERON:0003057!6.12e-27!15;UBERON:0002420!2.81e-26!9;UBERON:0007245!2.81e-26!9;UBERON:0010009!2.81e-26!9;UBERON:0010011!2.81e-26!9;UBERON:0000454!2.81e-26!9;UBERON:0009663!2.59e-25!7;UBERON:0000025!2.79e-23!194;UBERON:0004733!9.59e-21!12;UBERON:0002028!9.59e-21!12;UBERON:0007277!9.59e-21!12;UBERON:0004732!4.47e-19!13;UBERON:0004111!2.08e-17!241;UBERON:0001896!9.83e-17!3;UBERON:0005290!9.83e-17!3;UBERON:0010096!9.83e-17!3;UBERON:0000988!3.78e-16!3;UBERON:0006331!4.19e-16!3;UBERON:0001871!2.66e-15!7;UBERON:0000477!1.05e-14!286;UBERON:0000200!7.17e-14!6;UBERON:0000483!4.20e-13!309;UBERON:0000119!6.57e-13!312;UBERON:0000064!6.19e-12!219;UBERON:0000475!7.47e-12!365;UBERON:0000369!1.85e-11!4;UBERON:0002435!1.85e-11!4;UBERON:0000204!1.85e-11!4;UBERON:0010082!1.85e-11!4;UBERON:0001897!2.57e-11!2;UBERON:0001875!3.00e-11!2;UBERON:0006514!3.00e-11!2;UBERON:0002148!4.76e-11!2;UBERON:0009662!4.76e-11!2;UBERON:0001872!1.03e-09!5;UBERON:0002680!1.65e-09!9;UBERON:0001895!1.65e-09!9;UBERON:0010092!1.65e-09!9;UBERON:0002021!1.75e-09!5;UBERON:0000349!3.34e-09!5;UBERON:0002240!6.35e-08!3;UBERON:0002771!8.34e-08!3;UBERON:0005383!1.86e-07!3;UBERON:0005382!1.86e-07!3;UBERON:0001894!5.04e-07!7;UBERON:0006222!5.04e-07!7;UBERON:0000062!5.39e-07!511;UBERON:0002038!9.30e-07!1;UBERON:0009661!9.30e-07!1;UBERON:0002336!9.81e-07!1;UBERON:0001018!9.81e-07!1;UBERON:0002473!9.81e-07!1;UBERON:0005340!9.81e-07!1;UBERON:0002316!9.81e-07!1;UBERON:0003544!9.81e-07!1;UBERON:0001020!9.81e-07!1;UBERON:0005970!9.81e-07!1;UBERON:0002437!9.81e-07!1 | ||
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|short_description=p23@CSMD1 | |short_description=p23@CSMD1 | ||
}} | }} |
Latest revision as of 00:57, 18 September 2015
Short description: | p23@CSMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_CSMD1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -36bp_to_ENST00000524177_5end |
EntrezGene: | CSMD1 |
HGNC: | 14026 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data