FFCP PHASE1:Hg19::chr1:19229226..19229237,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:19229226..19229237,-
|short_description=p4@ALDH4A1
|description=CAGE_peak_4_at_ALDH4A1_5end
|association_with_transcript=-8bp_to_ENST00000432718_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8659 | |EntrezGene=8659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=406 | |HGNC=406 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TF55 | |UniProt=Q5TF55 | ||
|association_with_transcript=-8bp_to_ENST00000432718_5end | |||
|cluster_id=chr1:19229226..19229237,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_ALDH4A1_5end | |||
|id=chr1:19229226..19229237,- | |||
|ontology_enrichment_celltype=CL:0000136!3.18e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.82e-26;13!CL:0000182;3.51e-16;12!CL:0002521;1.76e-08;3!CL:0002615;3.80e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.43e-22,15;CL:0000182,3.47e-16,12;CL:0002521,1.97e-08,3;CL:0002615,4.23e-08,3;CL:0002252,9.25e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.91e-12;11!UBERON:0009497;2.43e-10;13!UBERON:0003104;7.41e-08;31!UBERON:0008425;3.94e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.49e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.04e-17;19!UBERON:0006925;1.04e-17;19!UBERON:0002365;5.79e-16;31!UBERON:0002330;5.79e-16;31!UBERON:0002423;3.66e-13;25!UBERON:0002368;7.46e-09;33!UBERON:0002190;1.76e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.01e-17,19;UBERON:0006925,1.01e-17,19;UBERON:0008836,1.01e-17,19;UBERON:0002365,2.55e-16,31;UBERON:0002330,2.55e-16,31;UBERON:0008835,3.87e-15,22;UBERON:0003894,3.87e-15,22;UBERON:0009854,2.00e-14,23;UBERON:0007499,3.58e-13,25;UBERON:0009497,3.58e-13,25;UBERON:0000015,3.58e-13,25;UBERON:0002423,3.58e-13,25;UBERON:0006235,3.58e-13,25;UBERON:0004161,3.58e-13,25;UBERON:0009856,1.28e-12,26;UBERON:0002417,6.25e-11,60;UBERON:0000916,6.25e-11,60;UBERON:0002368,4.69e-09,35;UBERON:0005172,1.49e-08,54;UBERON:0005173,1.49e-08,54;UBERON:0002190,1.97e-08,3;UBERON:0009569,5.62e-08,112;UBERON:0002530,1.05e-07,59;UBERON:0003929,8.02e-07,54;UBERON:0000949,8.99e-07,45 | |||
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| ||
|short_description=p4@ALDH4A1 | |||
}} | }} |
Latest revision as of 09:30, 19 September 2015
Short description: | p4@ALDH4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ALDH4A1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -8bp_to_ENST00000432718_5end |
EntrezGene: | ALDH4A1 |
HGNC: | 406 |
UniProt: | Q5TF55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.43e-22 | 15 |
hepatocyte | 3.47e-16 | 12 |
subcutaneous fat cell | 1.97e-08 | 3 |
adipocyte of omentum tissue | 4.23e-08 | 3 |
epithelial cell of esophagus | 9.25e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 1.01e-17 | 19 |
digestive gland | 1.01e-17 | 19 |
liver bud | 1.01e-17 | 19 |
exocrine gland | 2.55e-16 | 31 |
exocrine system | 2.55e-16 | 31 |
hepatic diverticulum | 3.87e-15 | 22 |
liver primordium | 3.87e-15 | 22 |
digestive tract diverticulum | 2.00e-14 | 23 |
epithelial sac | 3.58e-13 | 25 |
epithelium of foregut-midgut junction | 3.58e-13 | 25 |
anatomical boundary | 3.58e-13 | 25 |
hepatobiliary system | 3.58e-13 | 25 |
foregut-midgut junction | 3.58e-13 | 25 |
septum transversum | 3.58e-13 | 25 |
sac | 1.28e-12 | 26 |
abdominal segment of trunk | 6.25e-11 | 60 |
abdomen | 6.25e-11 | 60 |
endocrine gland | 4.69e-09 | 35 |
abdomen element | 1.49e-08 | 54 |
abdominal segment element | 1.49e-08 | 54 |
subcutaneous adipose tissue | 1.97e-08 | 3 |
subdivision of trunk | 5.62e-08 | 112 |
gland | 1.05e-07 | 59 |
gut epithelium | 8.02e-07 | 54 |
endocrine system | 8.99e-07 | 45 |