FFCP PHASE1:Hg19::chr12:10331605..10331616,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=120939 | |EntrezGene=120939 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26438 | |HGNC=26438 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000298530_5end | |association_with_transcript=0bp_to_ENST00000298530_5end | ||
|cluster_id=chr12:10331605..10331616,+ | |||
|coexpression_cluster_id=C2176 | |coexpression_cluster_id=C2176 | ||
|description=CAGE_peak_5_at_C12orf59_5end | |description=CAGE_peak_5_at_C12orf59_5end | ||
|id=chr12:10331605..10331616,+ | |id=chr12:10331605..10331616,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.40e-09!4;CL:0002195!8.18e-09!2;CL:0002571!8.18e-09!2;CL:1000487!1.10e-07!2;CL:0000860!1.63e-07!45 | |ontology_enrichment_celltype=CL:0002563!3.40e-09!4;CL:0002195!8.18e-09!2;CL:0002571!8.18e-09!2;CL:1000487!1.10e-07!2;CL:0000860!1.63e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0002195;5.33e-27;2!CL:0002571;5.33e-27;2!CL:0002563;3.37e-14;4!CL:0002253;7.52e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,7.96e-27,2;CL:0002571,7.96e-27,2;CL:0002563,3.85e-14,4;CL:0002253,8.60e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.22e-11;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.92e-14!12;UBERON:0003350!4.03e-12!5;UBERON:0001242!3.40e-09!4;UBERON:0001262!3.40e-09!4;UBERON:0004786!3.40e-09!4;UBERON:0004808!3.40e-09!4;UBERON:0001277!3.40e-09!4;UBERON:0003343!6.05e-09!4;UBERON:0004785!6.05e-09!4;UBERON:0000060!1.93e-07!12;UBERON:0003729!3.12e-07!5 | |ontology_enrichment_uberon=UBERON:0000344!2.92e-14!12;UBERON:0003350!4.03e-12!5;UBERON:0001242!3.40e-09!4;UBERON:0001262!3.40e-09!4;UBERON:0004786!3.40e-09!4;UBERON:0004808!3.40e-09!4;UBERON:0001277!3.40e-09!4;UBERON:0003343!6.05e-09!4;UBERON:0004785!6.05e-09!4;UBERON:0000060!1.93e-07!12;UBERON:0003729!3.12e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;2.76e-14;4!UBERON:0001242;3.37e-14;4!UBERON:0001262;3.37e-14;4!UBERON:0004786;3.37e-14;4!UBERON:0004808;3.37e-14;4!UBERON:0001277;3.37e-14;4!UBERON:0004907;1.28e-11;5!UBERON:0000485;1.65e-08;7!UBERON:0003929;1.65e-08;7!UBERON:0003350;1.49e-07;8!UBERON:0000160;2.98e-07;17!UBERON:0002107;7.34e-07;19!UBERON:0006925;7.34e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,3.16e-14,4;UBERON:0001242,3.85e-14,4;UBERON:0001262,3.85e-14,4;UBERON:0004786,3.85e-14,4;UBERON:0004808,3.85e-14,4;UBERON:0001277,3.85e-14,4;UBERON:0004907,1.42e-11,5;UBERON:0003350,1.60e-07,8;UBERON:0000160,3.11e-07,17;UBERON:0002107,7.80e-07,19;UBERON:0006925,7.80e-07,19;UBERON:0008836,7.80e-07,19;UBERON:0000485,8.84e-07,9 | |||
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| ||
|short_description=p5@C12orf59 | |short_description=p5@C12orf59 | ||
}} | }} |
Latest revision as of 21:48, 15 September 2015
Short description: | p5@C12orf59 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_C12orf59_5end |
Coexpression cluster: | C2176_kidney_hepatoblastoma_rectal_glioblastoma_normal_mesothelioma_oral |
Association with transcript: | 0bp_to_ENST00000298530_5end |
EntrezGene: | C12orf59 |
HGNC: | 26438 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 7.96e-27 | 2 |
hepatic mesenchymal stem cell | 7.96e-27 | 2 |
intestinal epithelial cell | 3.85e-14 | 4 |
epithelial cell of large intestine | 8.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
rectum | 3.16e-14 | 4 |
intestinal mucosa | 3.85e-14 | 4 |
wall of intestine | 3.85e-14 | 4 |
gastrointestinal system mucosa | 3.85e-14 | 4 |
gastrointestinal system epithelium | 3.85e-14 | 4 |
intestinal epithelium | 3.85e-14 | 4 |
lower digestive tract | 1.42e-11 | 5 |
epithelium of mucosa | 1.60e-07 | 8 |
intestine | 3.11e-07 | 17 |
liver | 7.80e-07 | 19 |
digestive gland | 7.80e-07 | 19 |
liver bud | 7.80e-07 | 19 |
simple columnar epithelium | 8.84e-07 | 9 |