FFCP PHASE1:Hg19::chr11:32851487..32851496,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79056 | |EntrezGene=79056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30799 | |HGNC=30799 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BZD6 | |UniProt=Q9BZD6 | ||
|association_with_transcript=0bp_to_ENST00000257836,uc001mtx.2_5end | |association_with_transcript=0bp_to_ENST00000257836,uc001mtx.2_5end | ||
|cluster_id=chr11:32851487..32851496,+ | |||
|coexpression_cluster_id=C3144 | |coexpression_cluster_id=C3144 | ||
|description=CAGE_peak_4_at_PRRG4_5end | |description=CAGE_peak_4_at_PRRG4_5end | ||
|id=chr11:32851487..32851496,+ | |id=chr11:32851487..32851496,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.03e-16!254;CL:0000223!1.83e-16!59;CL:0002076!5.81e-16!43;CL:0002251!7.37e-14!21;CL:0002159!2.28e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.03e-16!254;CL:0000223!1.83e-16!59;CL:0002076!5.81e-16!43;CL:0002251!7.37e-14!21;CL:0002159!2.28e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002166;1.23e-13;3!CL:0002251;1.31e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,2.10e-14,3;CL:0002251,1.30e-07,20;CL:0000223,3.98e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.30e-15!14;DOID:305!4.90e-15!106;DOID:0050687!1.54e-10!143 | |ontology_enrichment_disease=DOID:1749!3.30e-15!14;DOID:305!4.90e-15!106;DOID:0050687!1.54e-10!143 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.75e-14;14!DOID:4074;1.16e-09;2!DOID:4905;1.16e-09;2!DOID:3498;1.16e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.39e-14,14;DOID:4074,7.52e-10,2;DOID:4905,7.52e-10,2;DOID:3498,7.52e-10,2;DOID:305,5.50e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.89e-25!169;UBERON:0000925!8.89e-25!169;UBERON:0006595!8.89e-25!169;UBERON:0001007!5.94e-22!155;UBERON:0001555!5.94e-22!155;UBERON:0007026!5.94e-22!155;UBERON:0004921!4.56e-19!129;UBERON:0004185!4.56e-19!129;UBERON:0001004!2.25e-16!72;UBERON:0000077!6.47e-16!130;UBERON:0000161!2.99e-14!35;UBERON:0001041!4.87e-12!98;UBERON:0000166!1.97e-11!21;UBERON:0000065!2.45e-10!53;UBERON:0000344!3.95e-10!12;UBERON:0005911!2.75e-09!82;UBERON:0000165!6.57e-09!28;UBERON:0000930!6.57e-09!28;UBERON:0003729!5.88e-08!5;UBERON:0000974!1.08e-07!10;UBERON:0002530!1.62e-07!59;UBERON:0000466!2.83e-07!126;UBERON:0005153!7.71e-07!37 | |ontology_enrichment_uberon=UBERON:0004119!8.89e-25!169;UBERON:0000925!8.89e-25!169;UBERON:0006595!8.89e-25!169;UBERON:0001007!5.94e-22!155;UBERON:0001555!5.94e-22!155;UBERON:0007026!5.94e-22!155;UBERON:0004921!4.56e-19!129;UBERON:0004185!4.56e-19!129;UBERON:0001004!2.25e-16!72;UBERON:0000077!6.47e-16!130;UBERON:0000161!2.99e-14!35;UBERON:0001041!4.87e-12!98;UBERON:0000166!1.97e-11!21;UBERON:0000065!2.45e-10!53;UBERON:0000344!3.95e-10!12;UBERON:0005911!2.75e-09!82;UBERON:0000165!6.57e-09!28;UBERON:0000930!6.57e-09!28;UBERON:0003729!5.88e-08!5;UBERON:0000974!1.08e-07!10;UBERON:0002530!1.62e-07!59;UBERON:0000466!2.83e-07!126;UBERON:0005153!7.71e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0001708;2.38e-10;4!UBERON:0008895;2.38e-10;4!UBERON:0011159;2.27e-08;5!UBERON:0001043;5.55e-07;3!UBERON:0006947;5.55e-07;3!UBERON:0004054;5.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,6.41e-11,4;UBERON:0008895,6.41e-11,4;UBERON:0011159,8.07e-09,5;UBERON:0008814,2.63e-08,18;UBERON:0010188,2.05e-07,6;UBERON:0002539,2.05e-07,6;UBERON:0008816,2.05e-07,6;UBERON:0006947,3.11e-07,3;UBERON:0004054,3.11e-07,3;UBERON:0001043,4.73e-07,3;UBERON:0009143,4.73e-07,3 | |||
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| ||
|short_description=p4@PRRG4 | |short_description=p4@PRRG4 | ||
}} | }} |
Latest revision as of 15:58, 17 September 2015
Short description: | p4@PRRG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRRG4_5end |
Coexpression cluster: | C3144_cervical_pharyngeal_oral_amniotic_keratoacanthoma_esophagus_squamous |
Association with transcript: | 0bp_to_ENST00000257836, uc001mtx.2_5end |
EntrezGene: | PRRG4 |
HGNC: | 30799 |
UniProt: | Q9BZD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 2.10e-14 | 3 |
epithelial cell of alimentary canal | 1.30e-07 | 20 |
endodermal cell | 3.98e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 6.41e-11 | 4 |
splanchnocranium | 6.41e-11 | 4 |
primary subdivision of cranial skeletal system | 8.07e-09 | 5 |
pharyngeal arch system | 2.63e-08 | 18 |
protuberance | 2.05e-07 | 6 |
pharyngeal arch | 2.05e-07 | 6 |
embryonic head | 2.05e-07 | 6 |
male genital duct | 3.11e-07 | 3 |
internal male genitalia | 3.11e-07 | 3 |
esophagus | 4.73e-07 | 3 |
esophageal region | 4.73e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.39e-14 | 14 |
pancreas adenocarcinoma | 7.52e-10 | 2 |
pancreatic carcinoma | 7.52e-10 | 2 |
pancreatic ductal adenocarcinoma | 7.52e-10 | 2 |
carcinoma | 5.50e-08 | 106 |