FFCP PHASE1:Hg19::chr3:129375590..129375615,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23023 | |EntrezGene=23023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29116 | |HGNC=29116 | ||
|TSSclassifier=strong | |||
|UniProt=D6RH19 | |UniProt=D6RH19 | ||
|association_with_transcript=-21bp_to_ENST00000510323_5end | |association_with_transcript=-21bp_to_ENST00000510323_5end | ||
|cluster_id=chr3:129375590..129375615,- | |||
|coexpression_cluster_id=C4281 | |coexpression_cluster_id=C4281 | ||
|description=CAGE_peak_7_at_TMCC1_5end | |description=CAGE_peak_7_at_TMCC1_5end | ||
|id=chr3:129375590..129375615,- | |id=chr3:129375590..129375615,- | ||
|ontology_enrichment_celltype=CL:0000181!8.52e-14!12;CL:0000417!8.52e-14!12;CL:0000668!8.52e-14!12;CL:0000414!8.52e-14!12;CL:0000412!8.52e-14!12;CL:0000182!8.52e-14!12;CL:0005020!7.71e-07!6;CL:0002138!7.71e-07!6;CL:0005022!7.71e-07!6 | |ontology_enrichment_celltype=CL:0000181!8.52e-14!12;CL:0000417!8.52e-14!12;CL:0000668!8.52e-14!12;CL:0000414!8.52e-14!12;CL:0000412!8.52e-14!12;CL:0000182!8.52e-14!12;CL:0005020!7.71e-07!6;CL:0002138!7.71e-07!6;CL:0005022!7.71e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.16e-22;12!CL:0000319;6.65e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.16e-22,12;CL:0000319,6.65e-09,1;CL:0000223,3.05e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.08e-18;31!UBERON:0004161;2.01e-17;11!UBERON:0009497;1.02e-14;13!UBERON:0001041;1.03e-08;30!UBERON:0003918;2.47e-07;10!UBERON:0007687;2.47e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3030;6.65e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,6.65e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0009497!5.31e-13!25;UBERON:0000015!5.31e-13!25;UBERON:0002423!5.31e-13!25;UBERON:0006235!5.31e-13!25;UBERON:0004161!5.31e-13!25;UBERON:0008835!7.41e-13!22;UBERON:0003894!7.41e-13!22;UBERON:0002107!7.76e-13!19;UBERON:0006925!7.76e-13!19;UBERON:0008836!7.76e-13!19;UBERON:0005172!1.45e-12!55;UBERON:0005173!1.45e-12!55;UBERON:0009854!3.52e-12!23;UBERON:0007499!5.42e-11!25;UBERON:0002417!7.80e-11!61;UBERON:0000916!7.80e-11!61;UBERON:0009856!1.81e-10!26;UBERON:0005057!2.17e-10!26;UBERON:0003929!1.84e-08!54;UBERON:0005177!9.98e-08!107;UBERON:0009569!5.03e-07!113;UBERON:0002365!5.56e-07!31;UBERON:0002330!5.56e-07!31;UBERON:0004111!9.85e-07!241 | |ontology_enrichment_uberon=UBERON:0009497!5.31e-13!25;UBERON:0000015!5.31e-13!25;UBERON:0002423!5.31e-13!25;UBERON:0006235!5.31e-13!25;UBERON:0004161!5.31e-13!25;UBERON:0008835!7.41e-13!22;UBERON:0003894!7.41e-13!22;UBERON:0002107!7.76e-13!19;UBERON:0006925!7.76e-13!19;UBERON:0008836!7.76e-13!19;UBERON:0005172!1.45e-12!55;UBERON:0005173!1.45e-12!55;UBERON:0009854!3.52e-12!23;UBERON:0007499!5.42e-11!25;UBERON:0002417!7.80e-11!61;UBERON:0000916!7.80e-11!61;UBERON:0009856!1.81e-10!26;UBERON:0005057!2.17e-10!26;UBERON:0003929!1.84e-08!54;UBERON:0005177!9.98e-08!107;UBERON:0009569!5.03e-07!113;UBERON:0002365!5.56e-07!31;UBERON:0002330!5.56e-07!31;UBERON:0004111!9.85e-07!241 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.42e-25;19!UBERON:0006925;9.42e-25;19!UBERON:0002423;1.49e-18;25!UBERON:0002365;3.24e-14;31!UBERON:0002330;3.24e-14;31!UBERON:0002368;1.52e-12;33!UBERON:0000949;2.53e-11;43!UBERON:0005172;4.48e-10;52!UBERON:0005173;4.48e-10;52!UBERON:0002417;2.23e-09;58!UBERON:0000916;2.23e-09;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.43e-25,19;UBERON:0006925,9.43e-25,19;UBERON:0008836,9.43e-25,19;UBERON:0008835,3.13e-21,22;UBERON:0003894,3.13e-21,22;UBERON:0009854,2.93e-20,23;UBERON:0007499,1.49e-18,25;UBERON:0009497,1.49e-18,25;UBERON:0000015,1.49e-18,25;UBERON:0002423,1.49e-18,25;UBERON:0006235,1.49e-18,25;UBERON:0004161,1.49e-18,25;UBERON:0009856,8.51e-18,26;UBERON:0005172,3.60e-15,54;UBERON:0005173,3.60e-15,54;UBERON:0002365,9.53e-15,31;UBERON:0002330,9.53e-15,31;UBERON:0002417,1.85e-13,60;UBERON:0000916,1.85e-13,60;UBERON:0002368,6.20e-13,35;UBERON:0000949,2.53e-12,45;UBERON:0005177,2.86e-10,101;UBERON:0003929,5.08e-10,54;UBERON:0009569,1.28e-07,112;UBERON:0005911,1.36e-07,82;UBERON:0002530,3.25e-07,59 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,1.06729878806013,1.00416183829401,0,1.52054421143703,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16193942869518,0.932949495138334,0.756962552626885,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,17.6908899001973,13.5881678536723,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0.462092022626489,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7821073144885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,3.20088922641049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.179515288819544,0.54323685961004,0.31900115973192,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,1.13082457147153,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0.343189995723929,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,27.3377642606066,30.3290358842693,47.1824806979294,0.590564889088493,0,0,0,0,0,0,0,0,0,0,0.945668487590378,1.31136470337495,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8276412372329,6.62534444561107,0,0.13223260174269,3.93499727133958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0.443716206147409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0.53168342911599,1.5652351854352,0,0,0.406870733204662,0.363697318405119,0,0,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0183852992817,0,0,0,0,0,0,0,7.12741435385786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0.514464028312255,0,0,0,0,0,0,0,0,48.3677804329712,10.0327854456281,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,10.2411056985106,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,1.25755282949222,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,1.06729878806013,1.00416183829401,0,1.52054421143703,0,0.367663080345869,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16193942869518,0.932949495138334,0.756962552626885,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,17.6908899001973,13.5881678536723,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0.462092022626489,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7821073144885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,3.20088922641049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.179515288819544,0.54323685961004,0.31900115973192,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,1.13082457147153,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0.343189995723929,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,27.3377642606066,30.3290358842693,47.1824806979294,0.590564889088493,0,0,0,0,0,0,0,0,0,0,0.945668487590378,1.31136470337495,0,0,0,0,0,0,0,0,0,0,0,0,0,15.8276412372329,6.62534444561107,0,0.13223260174269,3.93499727133958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3755727921195,0,0.443716206147409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0.53168342911599,1.5652351854352,0,0,0.406870733204662,0.363697318405119,0,0,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0183852992817,0,0,0,0,0,0,0,7.12741435385786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0.514464028312255,0,0,0,0,0,0,0,0,48.3677804329712,10.0327854456281,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,10.2411056985106,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,1.25755282949222,0,0,0,0,0,0 | ||
|short_description=p7@TMCC1 | |short_description=p7@TMCC1 | ||
}} | }} |
Latest revision as of 18:04, 24 September 2015
Short description: | p7@TMCC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TMCC1_5end |
Coexpression cluster: | C4281_renal_hepatocellular_Hepatocyte_liver_mesothelioma_mucinous_signet |
Association with transcript: | -21bp_to_ENST00000510323_5end |
EntrezGene: | TMCC1 |
HGNC: | 29116 |
UniProt: | D6RH19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.16e-22 | 12 |
mucus secreting cell | 6.65e-09 | 1 |
endodermal cell | 3.05e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 9.43e-25 | 19 |
digestive gland | 9.43e-25 | 19 |
liver bud | 9.43e-25 | 19 |
hepatic diverticulum | 3.13e-21 | 22 |
liver primordium | 3.13e-21 | 22 |
digestive tract diverticulum | 2.93e-20 | 23 |
epithelial sac | 1.49e-18 | 25 |
epithelium of foregut-midgut junction | 1.49e-18 | 25 |
anatomical boundary | 1.49e-18 | 25 |
hepatobiliary system | 1.49e-18 | 25 |
foregut-midgut junction | 1.49e-18 | 25 |
septum transversum | 1.49e-18 | 25 |
sac | 8.51e-18 | 26 |
abdomen element | 3.60e-15 | 54 |
abdominal segment element | 3.60e-15 | 54 |
exocrine gland | 9.53e-15 | 31 |
exocrine system | 9.53e-15 | 31 |
abdominal segment of trunk | 1.85e-13 | 60 |
abdomen | 1.85e-13 | 60 |
endocrine gland | 6.20e-13 | 35 |
endocrine system | 2.53e-12 | 45 |
trunk region element | 2.86e-10 | 101 |
gut epithelium | 5.08e-10 | 54 |
subdivision of trunk | 1.28e-07 | 112 |
endo-epithelium | 1.36e-07 | 82 |
gland | 3.25e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 6.65e-09 | 1 |