FFCP PHASE1:Hg19::chr11:62622938..62622956,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23642 | |EntrezGene=23642 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=32688 | |HGNC=32688 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000537024,ENST00000538266,uc001nvq.2_5end | |association_with_transcript=0bp_to_ENST00000537024,ENST00000538266,uc001nvq.2_5end | ||
|cluster_id=chr11:62622938..62622956,- | |||
|description=CAGE_peak_2_at_SNHG1_5end | |description=CAGE_peak_2_at_SNHG1_5end | ||
|id=chr11:62622938..62622956,- | |id=chr11:62622938..62622956,- | ||
|ontology_enrichment_celltype=CL:0000066!7.99e-09!254 | |ontology_enrichment_celltype=CL:0000066!7.99e-09!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.83e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!7.84e-34!235;DOID:14566!1.38e-33!239;DOID:0050687!4.83e-21!143;DOID:305!2.24e-16!106;DOID:2531!6.26e-15!51;DOID:0060083!6.26e-15!51;DOID:0050686!3.53e-13!137;DOID:1240!1.40e-11!39;DOID:8692!1.53e-08!31;DOID:3095!7.04e-07!22;DOID:2994!7.04e-07!22 | |ontology_enrichment_disease=DOID:162!7.84e-34!235;DOID:14566!1.38e-33!239;DOID:0050687!4.83e-21!143;DOID:305!2.24e-16!106;DOID:2531!6.26e-15!51;DOID:0060083!6.26e-15!51;DOID:0050686!3.53e-13!137;DOID:1240!1.40e-11!39;DOID:8692!1.53e-08!31;DOID:3095!7.04e-07!22;DOID:2994!7.04e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.14e-09;39!DOID:2531;1.77e-09;51!DOID:0060083;1.77e-09;51!DOID:8692;1.04e-08;31!DOID:3095;2.38e-07;22!DOID:2994;2.38e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.33e-35,235;DOID:14566,4.83e-35,239;DOID:0050687,5.01e-22,143;DOID:305,7.27e-17,106;DOID:2531,6.54e-16,51;DOID:0060083,6.54e-16,51;DOID:0050686,2.12e-14,137;DOID:1240,2.40e-12,39;DOID:8692,4.17e-09,31;DOID:3095,5.54e-07,22;DOID:2994,5.54e-07,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@SNHG1 | |short_description=p2@SNHG1 | ||
}} | }} |
Latest revision as of 21:55, 18 September 2015
Short description: | p2@SNHG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SNHG1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000537024, ENST00000538266, uc001nvq.2_5end |
EntrezGene: | SNHG1 |
HGNC: | 32688 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.83e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.33e-35 | 235 |
disease of cellular proliferation | 4.83e-35 | 239 |
cell type cancer | 5.01e-22 | 143 |
carcinoma | 7.27e-17 | 106 |
hematologic cancer | 6.54e-16 | 51 |
immune system cancer | 6.54e-16 | 51 |
organ system cancer | 2.12e-14 | 137 |
leukemia | 2.40e-12 | 39 |
myeloid leukemia | 4.17e-09 | 31 |
germ cell and embryonal cancer | 5.54e-07 | 22 |
germ cell cancer | 5.54e-07 | 22 |