FFCP PHASE1:Hg19::chr9:22216815..22216826,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:22216815..22216826,+ | |||
|coexpression_cluster_id=C206 | |coexpression_cluster_id=C206 | ||
|description=CAGE_peak_at_chr9:22216815..22216826,+ | |description=CAGE_peak_at_chr9:22216815..22216826,+ | ||
|id=chr9:22216815..22216826,+ | |id=chr9:22216815..22216826,+ | ||
|ontology_enrichment_celltype=CL:0000064!4.20e-08!3;CL:0005012!4.20e-08!3;CL:0000067!4.20e-08!3;CL:0002304!4.20e-08!3;CL:0000167!3.78e-07!1;CL:0000164!3.78e-07!1;CL:0000502!3.78e-07!1;CL:0000172!3.78e-07!1;CL:0000173!3.78e-07!1;CL:0002351!3.78e-07!1;CL:0000342!8.98e-07!1;CL:0002565!8.98e-07!1 | |ontology_enrichment_celltype=CL:0000064!4.20e-08!3;CL:0005012!4.20e-08!3;CL:0000067!4.20e-08!3;CL:0002304!4.20e-08!3;CL:0000167!3.78e-07!1;CL:0000164!3.78e-07!1;CL:0000502!3.78e-07!1;CL:0000172!3.78e-07!1;CL:0000173!3.78e-07!1;CL:0002351!3.78e-07!1;CL:0000342!8.98e-07!1;CL:0002565!8.98e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000047;9.86e-18;2!CL:0000054;9.86e-18;2!CL:0000137;9.86e-18;2!CL:0000092;9.86e-18;2!CL:0000322;2.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,1.07e-17,2;CL:0000137,1.07e-17,2;CL:0000092,1.07e-17,2;CL:0000062,5.42e-13,11;CL:0000375,5.42e-13,11;CL:0000335,5.42e-13,11;CL:0000322,3.24e-12,3 | |||
|ontology_enrichment_development_v019=CL:0000335;5.76e-13;11 | |||
|ontology_enrichment_disease=DOID:1909!1.87e-12!2;DOID:3369!3.57e-07!1;DOID:4430!3.78e-07!1 | |ontology_enrichment_disease=DOID:1909!1.87e-12!2;DOID:3369!3.57e-07!1;DOID:4430!3.78e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:1909;5.48e-18;2!DOID:200;9.86e-18;2!DOID:4305;9.86e-18;2!DOID:3910;9.86e-18;2!DOID:3908;6.78e-08;5!DOID:201;8.72e-07;6!DOID:0060100;8.72e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.48e-18,2;DOID:200,1.07e-17,2;DOID:4305,1.07e-17,2;DOID:3910,1.27e-17,2;DOID:3908,7.49e-08,5;DOID:201,8.97e-07,6;DOID:0060100,8.97e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000488!9.78e-13!4;UBERON:0002203!1.17e-08!6;UBERON:0001768!1.17e-08!6;UBERON:0002200!3.69e-08!11;UBERON:0006876!3.69e-08!11;UBERON:0001778!4.20e-08!3;UBERON:0001775!4.20e-08!3;UBERON:0005705!4.51e-07!1;UBERON:0008193!4.51e-07!1;UBERON:0002514!4.51e-07!1;UBERON:0003462!4.51e-07!1;UBERON:0008001!4.51e-07!1;UBERON:0007914!4.51e-07!1;UBERON:0003457!4.51e-07!1;UBERON:0009292!4.51e-07!1;UBERON:0007375!4.51e-07!1;UBERON:0003323!4.51e-07!1;UBERON:0002397!4.51e-07!1;UBERON:0001709!4.51e-07!1;UBERON:0004066!4.51e-07!1;UBERON:0002244!4.51e-07!1;UBERON:0005620!4.51e-07!1;UBERON:0004068!4.51e-07!1;UBERON:0004362!4.51e-07!1;UBERON:0002506!8.98e-07!1;UBERON:0001769!8.98e-07!1 | |ontology_enrichment_uberon=UBERON:0000488!9.78e-13!4;UBERON:0002203!1.17e-08!6;UBERON:0001768!1.17e-08!6;UBERON:0002200!3.69e-08!11;UBERON:0006876!3.69e-08!11;UBERON:0001778!4.20e-08!3;UBERON:0001775!4.20e-08!3;UBERON:0005705!4.51e-07!1;UBERON:0008193!4.51e-07!1;UBERON:0002514!4.51e-07!1;UBERON:0003462!4.51e-07!1;UBERON:0008001!4.51e-07!1;UBERON:0007914!4.51e-07!1;UBERON:0003457!4.51e-07!1;UBERON:0009292!4.51e-07!1;UBERON:0007375!4.51e-07!1;UBERON:0003323!4.51e-07!1;UBERON:0002397!4.51e-07!1;UBERON:0001709!4.51e-07!1;UBERON:0004066!4.51e-07!1;UBERON:0002244!4.51e-07!1;UBERON:0005620!4.51e-07!1;UBERON:0004068!4.51e-07!1;UBERON:0004362!4.51e-07!1;UBERON:0002506!8.98e-07!1;UBERON:0001769!8.98e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0004903;9.86e-18;2!UBERON:0002173;9.86e-18;2!UBERON:0002186;9.86e-18;2!UBERON:0004821;2.74e-12;3!UBERON:0007499;2.74e-12;3!UBERON:0003215;2.74e-12;3!UBERON:0010368;2.74e-12;3!UBERON:0009911;2.74e-12;3!UBERON:0002299;2.74e-12;3!UBERON:0006524;2.74e-12;3!UBERON:0008874;2.74e-12;3!UBERON:0002169;2.74e-12;3!UBERON:0004894;2.74e-12;3!UBERON:0009856;1.50e-09;4!UBERON:0001474;2.61e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.27e-17,2;UBERON:0002173,1.27e-17,2;UBERON:0002186,1.27e-17,2;UBERON:0004821,3.24e-12,3;UBERON:0003215,3.24e-12,3;UBERON:0010368,3.24e-12,3;UBERON:0009911,3.24e-12,3;UBERON:0002299,3.24e-12,3;UBERON:0006524,3.24e-12,3;UBERON:0008874,3.24e-12,3;UBERON:0002169,3.24e-12,3;UBERON:0004894,3.24e-12,3 | |||
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|short_description=p@chr9:22216815..22216826,+ | |short_description=p@chr9:22216815..22216826,+ | ||
}} | }} |
Latest revision as of 01:11, 1 August 2015
Short description: | p@chr9:22216815..22216826, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:22216815..22216826, + |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 1.07e-17 | 2 |
osteocyte | 1.07e-17 | 2 |
osteoclast | 1.07e-17 | 2 |
osteoblast | 5.42e-13 | 11 |
osteoprogenitor cell | 5.42e-13 | 11 |
mesenchyme condensation cell | 5.42e-13 | 11 |
pneumocyte | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.27e-17 | 2 |
alveolar duct | 1.27e-17 | 2 |
bronchiole | 1.27e-17 | 2 |
pulmonary alveolus epithelium | 3.24e-12 | 3 |
alveolus | 3.24e-12 | 3 |
pulmonary lobule | 3.24e-12 | 3 |
lobule | 3.24e-12 | 3 |
alveolus of lung | 3.24e-12 | 3 |
alveolar system | 3.24e-12 | 3 |
pulmonary acinus | 3.24e-12 | 3 |
alveolar sac | 3.24e-12 | 3 |
alveolar wall | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.48e-18 | 2 |
giant cell tumor | 1.07e-17 | 2 |
bone giant cell tumor | 1.07e-17 | 2 |
lung adenocarcinoma | 1.27e-17 | 2 |
non-small cell lung carcinoma | 7.49e-08 | 5 |
connective tissue cancer | 8.97e-07 | 6 |
musculoskeletal system cancer | 8.97e-07 | 6 |