FFCP PHASE1:Hg19::chr11:117699603..117699615,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:117699603..117699615,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr11:117699603..117699615,+ | |description=CAGE_peak_at_chr11:117699603..117699615,+ | ||
|id=chr11:117699603..117699615,+ | |id=chr11:117699603..117699615,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.90e-88!42;CL:0000860!4.35e-82!45;CL:0002009!5.29e-66!65;CL:0000766!5.96e-63!76;CL:0000557!6.98e-60!71;CL:0002194!1.32e-59!63;CL:0000576!1.32e-59!63;CL:0000040!1.32e-59!63;CL:0000559!1.32e-59!63;CL:0000839!5.03e-53!70;CL:0000738!1.66e-52!140;CL:0000763!6.10e-46!112;CL:0000049!6.10e-46!112;CL:0000037!3.15e-41!172;CL:0000566!3.15e-41!172;CL:0002087!7.03e-40!119;CL:0000988!1.64e-38!182;CL:0002031!4.85e-38!124;CL:0002032!2.03e-34!165;CL:0000837!2.03e-34!165;CL:0000134!2.21e-15!358;CL:0002320!6.40e-15!365;CL:0000784!3.44e-14!3;CL:0000767!8.36e-14!3;CL:0000219!2.75e-13!390;CL:0000034!1.37e-11!444;CL:0000048!2.48e-11!430;CL:0000723!4.71e-11!436;CL:0000451!4.30e-10!10;CL:0001014!4.39e-10!2;CL:0001016!4.39e-10!2;CL:0000094!5.32e-09!8;CL:0002393!2.76e-08!9;CL:0002397!2.76e-08!9;CL:0000840!3.52e-07!5;CL:0001029!3.52e-07!5;CL:0000842!8.06e-07!3;CL:0000063!9.40e-07!578 | |ontology_enrichment_celltype=CL:0002057!1.90e-88!42;CL:0000860!4.35e-82!45;CL:0002009!5.29e-66!65;CL:0000766!5.96e-63!76;CL:0000557!6.98e-60!71;CL:0002194!1.32e-59!63;CL:0000576!1.32e-59!63;CL:0000040!1.32e-59!63;CL:0000559!1.32e-59!63;CL:0000839!5.03e-53!70;CL:0000738!1.66e-52!140;CL:0000763!6.10e-46!112;CL:0000049!6.10e-46!112;CL:0000037!3.15e-41!172;CL:0000566!3.15e-41!172;CL:0002087!7.03e-40!119;CL:0000988!1.64e-38!182;CL:0002031!4.85e-38!124;CL:0002032!2.03e-34!165;CL:0000837!2.03e-34!165;CL:0000134!2.21e-15!358;CL:0002320!6.40e-15!365;CL:0000784!3.44e-14!3;CL:0000767!8.36e-14!3;CL:0000219!2.75e-13!390;CL:0000034!1.37e-11!444;CL:0000048!2.48e-11!430;CL:0000723!4.71e-11!436;CL:0000451!4.30e-10!10;CL:0001014!4.39e-10!2;CL:0001016!4.39e-10!2;CL:0000094!5.32e-09!8;CL:0002393!2.76e-08!9;CL:0002397!2.76e-08!9;CL:0000840!3.52e-07!5;CL:0001029!3.52e-07!5;CL:0000842!8.06e-07!3;CL:0000063!9.40e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.07e-27;33!CL:0002057;2.07e-27;33!CL:0000473;7.26e-22;39!CL:0000234;7.26e-22;39!CL:0000576;2.18e-19;48!CL:0002393;2.92e-19;6!CL:0002397;2.92e-19;6!CL:0000766;1.37e-17;69!CL:0000784;1.71e-17;3!CL:0000451;1.08e-10;10!CL:0002087;2.67e-08;104!CL:0001014;2.05e-07;2!CL:0001016;2.05e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.88e-41,42;CL:0002057,2.88e-41,42;CL:0000473,6.01e-36,48;CL:0000234,6.01e-36,48;CL:0002009,2.37e-32,61;CL:0000557,2.28e-29,67;CL:0002194,1.71e-28,59;CL:0000576,1.71e-28,59;CL:0000040,1.71e-28,59;CL:0000559,1.71e-28,59;CL:0000839,2.26e-25,66;CL:0000766,3.58e-23,72;CL:0000738,9.84e-19,136;CL:0000763,9.43e-18,108;CL:0000049,9.43e-18,108;CL:0000784,2.11e-17,3;CL:0002031,7.80e-16,120;CL:0000037,7.38e-15,168;CL:0002087,4.83e-14,115;CL:0000988,5.11e-14,177;CL:0002393,4.60e-13,9;CL:0002397,4.60e-13,9;CL:0002032,2.06e-11,161;CL:0000837,2.06e-11,161;CL:0000451,1.23e-10,10;CL:0001014,2.25e-07,2;CL:0001016,2.25e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-28;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.11e-52!80;UBERON:0001474!2.84e-48!86;UBERON:0002390!3.29e-45!102;UBERON:0003061!3.29e-45!102;UBERON:0002193!1.60e-40!112;UBERON:0004765!4.48e-40!101;UBERON:0001434!4.48e-40!101;UBERON:0002405!2.46e-34!115;UBERON:0002204!2.15e-21!167;UBERON:0003081!2.23e-17!216;UBERON:0002384!2.74e-14!375 | |ontology_enrichment_uberon=UBERON:0002371!2.11e-52!80;UBERON:0001474!2.84e-48!86;UBERON:0002390!3.29e-45!102;UBERON:0003061!3.29e-45!102;UBERON:0002193!1.60e-40!112;UBERON:0004765!4.48e-40!101;UBERON:0001434!4.48e-40!101;UBERON:0002405!2.46e-34!115;UBERON:0002204!2.15e-21!167;UBERON:0003081!2.23e-17!216;UBERON:0002384!2.74e-14!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.15e-26,76;UBERON:0001474,8.55e-24,82;UBERON:0004765,1.43e-21,90;UBERON:0002405,7.83e-21,93;UBERON:0002390,1.06e-19,98;UBERON:0003061,1.06e-19,98;UBERON:0001434,2.78e-19,100;UBERON:0002193,9.43e-18,108;UBERON:0002204,6.05e-11,167;UBERON:0003081,1.04e-08,203 | |||
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|short_description=p@chr11:117699603..117699615,+ | |short_description=p@chr11:117699603..117699615,+ | ||
}} | }} |
Latest revision as of 18:38, 23 July 2015
Short description: | p@chr11:117699603..117699615, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:117699603..117699615, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.88e-41 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.88e-41 | 42 |
defensive cell | 6.01e-36 | 48 |
phagocyte | 6.01e-36 | 48 |
macrophage dendritic cell progenitor | 2.37e-32 | 61 |
granulocyte monocyte progenitor cell | 2.28e-29 | 67 |
monopoietic cell | 1.71e-28 | 59 |
monocyte | 1.71e-28 | 59 |
monoblast | 1.71e-28 | 59 |
promonocyte | 1.71e-28 | 59 |
myeloid lineage restricted progenitor cell | 2.26e-25 | 66 |
myeloid leukocyte | 3.58e-23 | 72 |
leukocyte | 9.84e-19 | 136 |
myeloid cell | 9.43e-18 | 108 |
common myeloid progenitor | 9.43e-18 | 108 |
plasmacytoid dendritic cell | 2.11e-17 | 3 |
hematopoietic lineage restricted progenitor cell | 7.80e-16 | 120 |
hematopoietic stem cell | 7.38e-15 | 168 |
nongranular leukocyte | 4.83e-14 | 115 |
hematopoietic cell | 5.11e-14 | 177 |
intermediate monocyte | 4.60e-13 | 9 |
CD14-positive, CD16-positive monocyte | 4.60e-13 | 9 |
hematopoietic oligopotent progenitor cell | 2.06e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.06e-11 | 161 |
dendritic cell | 1.23e-10 | 10 |
CD1a-positive Langerhans cell | 2.25e-07 | 2 |
immature CD1a-positive Langerhans cell | 2.25e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.15e-26 | 76 |
bone element | 8.55e-24 | 82 |
skeletal element | 1.43e-21 | 90 |
immune system | 7.83e-21 | 93 |
hematopoietic system | 1.06e-19 | 98 |
blood island | 1.06e-19 | 98 |
skeletal system | 2.78e-19 | 100 |
hemolymphoid system | 9.43e-18 | 108 |
musculoskeletal system | 6.05e-11 | 167 |
lateral plate mesoderm | 1.04e-08 | 203 |