FFCP PHASE1:Hg19::chr2:191224772..191224776,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3628 | |EntrezGene=3628 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6071 | |HGNC=6071 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000487628_5end | |association_with_transcript=28bp_to_ENST00000487628_5end | ||
|cluster_id=chr2:191224772..191224776,+ | |||
|description=CAGE_peak_19_at_INPP1_5end | |description=CAGE_peak_19_at_INPP1_5end | ||
|id=chr2:191224772..191224776,+ | |id=chr2:191224772..191224776,+ | ||
|ontology_enrichment_celltype=CL:0000542!5.94e-13!53;CL:0000051!5.94e-13!53;CL:0000838!3.53e-12!52;CL:0000945!1.16e-07!24;CL:0000826!1.16e-07!24 | |ontology_enrichment_celltype=CL:0000542!5.94e-13!53;CL:0000051!5.94e-13!53;CL:0000838!3.53e-12!52;CL:0000945!1.16e-07!24;CL:0000826!1.16e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000236;9.51e-08;13!CL:0000542;1.73e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.04e-07,14;CL:0000838,4.00e-07,52;CL:0000542,5.38e-07,53;CL:0000051,5.38e-07,53 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.62e-23;1!UBERON:0003056;1.12e-08;3!CL:0000051;1.73e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.62e-23;1!DOID:0060061;2.62e-23;1!DOID:8691;2.62e-23;1!DOID:0060058;8.45e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.28e-23,1;DOID:0060061,3.28e-23,1;DOID:8691,3.28e-23,1;DOID:0060058,1.05e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.90e-23!115;UBERON:0001049!2.62e-22!57;UBERON:0005068!2.62e-22!57;UBERON:0006241!2.62e-22!57;UBERON:0007135!2.62e-22!57;UBERON:0002616!4.46e-18!59;UBERON:0002780!6.24e-18!41;UBERON:0001890!6.24e-18!41;UBERON:0006240!6.24e-18!41;UBERON:0003080!2.46e-17!42;UBERON:0001017!1.05e-16!82;UBERON:0005743!2.11e-16!86;UBERON:0003075!2.65e-15!86;UBERON:0007284!2.65e-15!86;UBERON:0001893!2.83e-15!34;UBERON:0000955!3.90e-15!69;UBERON:0006238!3.90e-15!69;UBERON:0002020!5.04e-15!34;UBERON:0003528!5.04e-15!34;UBERON:0000073!5.33e-15!94;UBERON:0001016!5.33e-15!94;UBERON:0002791!2.99e-14!33;UBERON:0002346!3.69e-14!90;UBERON:0001869!8.01e-13!32;UBERON:0003056!1.12e-10!61;UBERON:0002619!2.29e-10!22;UBERON:0002298!3.21e-10!8;UBERON:0001950!8.07e-10!20;UBERON:0000956!9.33e-09!25;UBERON:0000203!9.33e-09!25;UBERON:0002308!1.30e-08!9;UBERON:0000125!1.30e-08!9;UBERON:0000153!7.41e-08!129;UBERON:0007811!7.41e-08!129;UBERON:0000033!1.79e-07!123;UBERON:0004121!7.88e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!4.90e-23!115;UBERON:0001049!2.62e-22!57;UBERON:0005068!2.62e-22!57;UBERON:0006241!2.62e-22!57;UBERON:0007135!2.62e-22!57;UBERON:0002616!4.46e-18!59;UBERON:0002780!6.24e-18!41;UBERON:0001890!6.24e-18!41;UBERON:0006240!6.24e-18!41;UBERON:0003080!2.46e-17!42;UBERON:0001017!1.05e-16!82;UBERON:0005743!2.11e-16!86;UBERON:0003075!2.65e-15!86;UBERON:0007284!2.65e-15!86;UBERON:0001893!2.83e-15!34;UBERON:0000955!3.90e-15!69;UBERON:0006238!3.90e-15!69;UBERON:0002020!5.04e-15!34;UBERON:0003528!5.04e-15!34;UBERON:0000073!5.33e-15!94;UBERON:0001016!5.33e-15!94;UBERON:0002791!2.99e-14!33;UBERON:0002346!3.69e-14!90;UBERON:0001869!8.01e-13!32;UBERON:0003056!1.12e-10!61;UBERON:0002619!2.29e-10!22;UBERON:0002298!3.21e-10!8;UBERON:0001950!8.07e-10!20;UBERON:0000956!9.33e-09!25;UBERON:0000203!9.33e-09!25;UBERON:0002308!1.30e-08!9;UBERON:0000125!1.30e-08!9;UBERON:0000153!7.41e-08!129;UBERON:0007811!7.41e-08!129;UBERON:0000033!1.79e-07!123;UBERON:0004121!7.88e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0005162;9.75e-45;2!UBERON:0000122;9.75e-45;2!UBERON:0002336;2.62e-23;1!UBERON:0000941;2.62e-23;1!UBERON:0001785;2.62e-23;1!UBERON:0002464;2.62e-23;1!UBERON:0004904;2.62e-23;1!UBERON:0011215;2.62e-23;1!UBERON:0001018;2.62e-23;1!UBERON:0001021;2.62e-23;1!UBERON:0002473;2.62e-23;1!UBERON:0005340;2.62e-23;1!UBERON:0003544;2.62e-23;1!UBERON:0005970;2.62e-23;1!UBERON:0002316;2.62e-23;1!UBERON:0001020;2.62e-23;1!UBERON:0002437;2.62e-23;1!UBERON:0001897;2.31e-12;2!UBERON:0003714;2.31e-12;2!UBERON:0001875;2.31e-12;2!UBERON:0006514;2.31e-12;2!UBERON:0010225;2.31e-12;2!UBERON:0002784;8.14e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,3.19e-45,2;UBERON:0000122,3.19e-45,2;UBERON:0002336,1.34e-23,1;UBERON:0011215,1.34e-23,1;UBERON:0001018,1.34e-23,1;UBERON:0002473,1.34e-23,1;UBERON:0005340,1.34e-23,1;UBERON:0003544,1.34e-23,1;UBERON:0005970,1.34e-23,1;UBERON:0002316,1.34e-23,1;UBERON:0001020,1.34e-23,1;UBERON:0002437,1.34e-23,1;UBERON:0000941,1.67e-23,1;UBERON:0001785,1.67e-23,1;UBERON:0002464,1.67e-23,1;UBERON:0004904,1.67e-23,1;UBERON:0001021,1.67e-23,1;UBERON:0003902,1.67e-23,1;UBERON:0005425,1.67e-23,1;UBERON:0001875,1.48e-12,2;UBERON:0006514,1.48e-12,2;UBERON:0003714,1.85e-12,2;UBERON:0001897,3.24e-12,2;UBERON:0010225,3.24e-12,2;UBERON:0001781,7.27e-07,4;UBERON:0002784,9.63e-07,4 | |||
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| ||
|short_description=p19@INPP1 | |short_description=p19@INPP1 | ||
}} | }} |
Latest revision as of 03:10, 19 September 2015
Short description: | p19@INPP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_INPP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_ENST00000487628_5end |
EntrezGene: | INPP1 |
HGNC: | 6071 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.04e-07 | 14 |
lymphoid lineage restricted progenitor cell | 4.00e-07 | 52 |
lymphocyte | 5.38e-07 | 53 |
common lymphoid progenitor | 5.38e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 3.19e-45 | 2 |
neuron projection bundle | 3.19e-45 | 2 |
corpus callosum | 1.34e-23 | 1 |
central nervous system cell part cluster | 1.34e-23 | 1 |
axon tract | 1.34e-23 | 1 |
intercerebral commissure | 1.34e-23 | 1 |
dorsal telencephalic commissure | 1.34e-23 | 1 |
brain white matter | 1.34e-23 | 1 |
brain commissure | 1.34e-23 | 1 |
white matter | 1.34e-23 | 1 |
nervous system commissure | 1.34e-23 | 1 |
cerebral hemisphere white matter | 1.34e-23 | 1 |
cranial nerve II | 1.67e-23 | 1 |
cranial nerve | 1.67e-23 | 1 |
nerve trunk | 1.67e-23 | 1 |
nerve connecting eye with brain | 1.67e-23 | 1 |
nerve | 1.67e-23 | 1 |
retinal neural layer | 1.67e-23 | 1 |
presumptive neural retina | 1.67e-23 | 1 |
globus pallidus | 1.48e-12 | 2 |
pallidum | 1.48e-12 | 2 |
neural tissue | 1.85e-12 | 2 |
dorsal plus ventral thalamus | 3.24e-12 | 2 |
thalamic complex | 3.24e-12 | 2 |
layer of retina | 7.27e-07 | 4 |
regional part of diencephalon | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.28e-23 | 1 |
cutaneous T cell lymphoma | 3.28e-23 | 1 |
mycosis fungoides | 3.28e-23 | 1 |
lymphoma | 1.05e-09 | 10 |