FFCP PHASE1:Hg19::chr3:154801312..154801336,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4311 | |EntrezGene=4311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7154 | |HGNC=7154 | ||
|TSSclassifier=strong | |||
|UniProt=C9J7X4 | |UniProt=C9J7X4 | ||
|association_with_transcript=0bp_to_ENST00000497890_5end | |association_with_transcript=0bp_to_ENST00000497890_5end | ||
|cluster_id=chr3:154801312..154801336,+ | |||
|coexpression_cluster_id=C477 | |coexpression_cluster_id=C477 | ||
|description=CAGE_peak_29_at_MME_5end | |description=CAGE_peak_29_at_MME_5end | ||
|id=chr3:154801312..154801336,+ | |id=chr3:154801312..154801336,+ | ||
|ontology_enrichment_celltype=CL:0002588!4.79e-11!2;CL:0002569!4.60e-08!6;CL:0000594!1.96e-07!3 | |ontology_enrichment_celltype=CL:0002588!4.79e-11!2;CL:0002569!4.60e-08!6;CL:0000594!1.96e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002588;3.58e-57;2!CL:0002569;6.48e-43;6!CL:0000817;1.54e-29;1!CL:0000349;3.79e-14;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002588,3.58e-57,2;CL:0002569,5.62e-43,6;CL:0000349,3.62e-14,19;CL:0000817,8.99e-11,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;2.52e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.61e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0003422!4.60e-08!6 | |ontology_enrichment_uberon=UBERON:0003422!4.60e-08!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0003422;6.48e-43;6!UBERON:0003104;6.30e-37;7!UBERON:0009142;6.30e-37;7!UBERON:0002331;3.92e-26;10!UBERON:0002066;1.28e-23;5!UBERON:0001638;1.31e-13;9!UBERON:0010260;1.31e-13;9!UBERON:0003920;1.31e-13;9!UBERON:0004582;1.31e-13;9!UBERON:0000478;2.35e-11;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,5.62e-43,6;UBERON:0002331,3.60e-26,10;UBERON:0000358,3.60e-26,10;UBERON:0000307,3.60e-26,10;UBERON:0000091,3.60e-26,10;UBERON:0000087,3.60e-26,10;UBERON:0007010,3.60e-26,10;UBERON:0007806,3.60e-26,10;UBERON:0008780,3.60e-26,10;UBERON:0005728,3.60e-26,10;UBERON:0002066,1.28e-23,5;UBERON:0001638,1.31e-13,9;UBERON:0010260,1.31e-13,9;UBERON:0003920,1.31e-13,9;UBERON:0004582,1.31e-13,9;UBERON:0000478,2.27e-11,24 | |||
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|short_description=p29@MME | |short_description=p29@MME | ||
}} | }} |
Latest revision as of 04:52, 16 September 2015
Short description: | p29@MME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_MME_5end |
Coexpression cluster: | C477_Mesenchymal_Amniotic_Placental_chorionic_umbilical_Cardiac_acute |
Association with transcript: | 0bp_to_ENST00000497890_5end |
EntrezGene: | MME |
HGNC: | 7154 |
UniProt: | C9J7X4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical vein | 3.58e-57 | 2 |
mesenchymal stem cell of umbilical cord | 5.62e-43 | 6 |
extraembryonic cell | 3.62e-14 | 19 |
precursor B cell | 8.99e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
mesenchyme of umbilical cord | 5.62e-43 | 6 |
umbilical cord | 3.60e-26 | 10 |
blastocyst | 3.60e-26 | 10 |
blastula | 3.60e-26 | 10 |
bilaminar disc | 3.60e-26 | 10 |
inner cell mass | 3.60e-26 | 10 |
cleaving embryo | 3.60e-26 | 10 |
connecting stalk | 3.60e-26 | 10 |
inner cell mass derived epiblast | 3.60e-26 | 10 |
extraembryonic mesoderm | 3.60e-26 | 10 |
umbilical vein | 1.28e-23 | 5 |
vein | 1.31e-13 | 9 |
umbilical blood vessel | 1.31e-13 | 9 |
venous blood vessel | 1.31e-13 | 9 |
venous system | 1.31e-13 | 9 |
extraembryonic structure | 2.27e-11 | 24 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.61e-08 | 4 |