FFCP PHASE1:Hg19::chr1:169101273..169101294,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:169101273..169101294,+
|short_description=p@chr1:169101273..169101294,+
|description=CAGE_peak_at_chr1:169101273..169101294,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:169101273..169101294,+ | |||
|coexpression_cluster_id=C3900 | |||
|description=CAGE_peak_at_chr1:169101273..169101294,+ | |||
|id=chr1:169101273..169101294,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.53e-13!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.45e-13,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.88e-09;29!UBERON:0006601;8.74e-09;82!UBERON:0003104;1.65e-07;31!UBERON:0001041;2.10e-07;30 | |||
|ontology_enrichment_disease=DOID:305!2.91e-17!106;DOID:0050687!2.97e-13!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.27e-17,106;DOID:0050687,1.42e-12,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.77e-24!115;UBERON:0001049!1.15e-23!57;UBERON:0005068!1.15e-23!57;UBERON:0006241!1.15e-23!57;UBERON:0007135!1.15e-23!57;UBERON:0000062!7.00e-22!511;UBERON:0005743!4.07e-21!86;UBERON:0000073!5.00e-20!94;UBERON:0001016!5.00e-20!94;UBERON:0001017!7.00e-20!82;UBERON:0003075!8.09e-20!86;UBERON:0007284!8.09e-20!86;UBERON:0002780!6.79e-19!41;UBERON:0001890!6.79e-19!41;UBERON:0006240!6.79e-19!41;UBERON:0000955!9.09e-19!69;UBERON:0006238!9.09e-19!69;UBERON:0003080!1.29e-18!42;UBERON:0002616!2.37e-18!59;UBERON:0002346!1.25e-17!90;UBERON:0000468!6.93e-17!659;UBERON:0000481!1.16e-16!347;UBERON:0002020!1.42e-16!34;UBERON:0003528!1.42e-16!34;UBERON:0001893!1.79e-16!34;UBERON:0000064!2.49e-16!219;UBERON:0002791!7.74e-16!33;UBERON:0000033!1.49e-15!123;UBERON:0004121!1.94e-15!169;UBERON:0001869!2.49e-15!32;UBERON:0000467!1.01e-14!625;UBERON:0000153!1.29e-14!129;UBERON:0007811!1.29e-14!129;UBERON:0000480!1.52e-14!626;UBERON:0000924!3.33e-14!173;UBERON:0006601!3.33e-14!173;UBERON:0003056!5.28e-14!61;UBERON:0000922!7.14e-14!612;UBERON:0002619!1.82e-13!22;UBERON:0000475!9.67e-13!365;UBERON:0004111!1.36e-12!241;UBERON:0002050!1.53e-12!605;UBERON:0005423!1.53e-12!605;UBERON:0001950!2.53e-12!20;UBERON:0000923!3.26e-12!604;UBERON:0005291!3.26e-12!604;UBERON:0006598!3.26e-12!604;UBERON:0002532!3.26e-12!604;UBERON:0000956!4.22e-12!25;UBERON:0000203!4.22e-12!25;UBERON:0000477!5.12e-12!286;UBERON:0004119!1.16e-11!169;UBERON:0000925!1.16e-11!169;UBERON:0006595!1.16e-11!169;UBERON:0001007!5.47e-11!155;UBERON:0001555!5.47e-11!155;UBERON:0007026!5.47e-11!155;UBERON:0004921!7.57e-11!129;UBERON:0004185!7.57e-11!129;UBERON:0000025!8.70e-11!194;UBERON:0000483!2.87e-09!309;UBERON:0000119!3.63e-09!312;UBERON:0000077!1.27e-08!130;UBERON:0000063!2.70e-08!97;UBERON:0001041!2.74e-07!98;UBERON:0005911!7.78e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.46e-14;34!UBERON:0002020;2.46e-14;34!UBERON:0001893;2.66e-14;34!UBERON:0002791;3.49e-14;32!UBERON:0001869;3.52e-14;32!UBERON:0002780;4.41e-14;41!UBERON:0001890;4.41e-14;41!UBERON:0002619;8.21e-14;22!UBERON:0000073;1.24e-13;53!UBERON:0002616;1.24e-13;53!UBERON:0001950;1.22e-12;20!UBERON:0000956;1.83e-12;25!UBERON:0000203;1.83e-12;25!UBERON:0000955;1.51e-08;68!UBERON:0001017;3.02e-08;75!UBERON:0001016;1.85e-07;83!UBERON:0007023;2.00e-07;114 | |||
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| ||
|short_description=p@chr1:169101273..169101294,+ | |||
}} | }} |
Latest revision as of 00:09, 28 July 2015
Short description: | p@chr1:169101273..169101294, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:169101273..169101294, + |
Coexpression cluster: | C3900_kidney_gall_pons_small_renal_bile_optic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.45e-13 | 253 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.27e-17 | 106 |
cell type cancer | 1.42e-12 | 143 |