FFCP PHASE1:Hg19::chr12:53343831..53343861,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3875 | |EntrezGene=3875 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6430 | |HGNC=6430 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=242bp_to_ENST00000548015_5end | |association_with_transcript=242bp_to_ENST00000548015_5end | ||
|cluster_id=chr12:53343831..53343861,+ | |||
|description=CAGE_peak_5_at_KRT18_5end | |description=CAGE_peak_5_at_KRT18_5end | ||
|id=chr12:53343831..53343861,+ | |id=chr12:53343831..53343861,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.03e-40!254;CL:0000223!4.53e-12!59;CL:0000077!6.42e-12!19;CL:0000076!1.39e-11!62;CL:0000220!6.49e-11!246;CL:0002321!6.96e-11!248;CL:0002076!2.84e-09!43;CL:0002368!9.70e-07!13 | |ontology_enrichment_celltype=CL:0000066!3.03e-40!254;CL:0000223!4.53e-12!59;CL:0000077!6.42e-12!19;CL:0000076!1.39e-11!62;CL:0000220!6.49e-11!246;CL:0002321!6.96e-11!248;CL:0002076!2.84e-09!43;CL:0002368!9.70e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000077;7.00e-22;19!CL:0000322;7.44e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.17e-22,19;CL:0000066,1.70e-20,253;CL:0000076,4.01e-09,63;CL:0000213,3.45e-07,58;CL:0000215,3.45e-07,58;CL:0000322,6.19e-07,3;CL:0000223,9.17e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.28e-27!106;DOID:0050687!2.78e-23!143;DOID:162!1.42e-15!235;DOID:14566!4.61e-15!239;DOID:299!5.92e-12!25;DOID:7!3.04e-09!39 | |ontology_enrichment_disease=DOID:305!8.28e-27!106;DOID:0050687!2.78e-23!143;DOID:162!1.42e-15!235;DOID:14566!4.61e-15!239;DOID:299!5.92e-12!25;DOID:7!3.04e-09!39 | ||
|ontology_enrichment_disease_v019=DOID:299;3.67e-16;25!DOID:170;8.51e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.42e-17,143;DOID:305,3.16e-17,106;DOID:299,7.73e-16,25;DOID:162,1.43e-13,235;DOID:14566,5.49e-13,239;DOID:170,5.86e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.64e-15!169;UBERON:0000925!2.64e-15!169;UBERON:0006595!2.64e-15!169;UBERON:0005911!6.07e-14!82;UBERON:0005177!1.41e-13!107;UBERON:0001007!1.87e-12!155;UBERON:0001555!1.87e-12!155;UBERON:0007026!1.87e-12!155;UBERON:0002100!3.07e-12!216;UBERON:0000466!3.43e-12!126;UBERON:0000077!3.68e-12!130;UBERON:0004921!3.78e-12!129;UBERON:0004185!3.78e-12!129;UBERON:0003914!6.04e-12!118;UBERON:0009569!4.57e-11!113;UBERON:0003104!6.35e-11!238;UBERON:0009142!6.35e-11!238;UBERON:0001048!3.23e-10!168;UBERON:0000490!2.87e-09!138;UBERON:0001041!3.37e-09!98;UBERON:0000464!1.13e-08!104;UBERON:0006554!2.35e-08!44;UBERON:0005172!3.07e-08!55;UBERON:0005173!3.07e-08!55;UBERON:0005153!3.87e-08!37;UBERON:0002417!5.71e-08!61;UBERON:0000916!5.71e-08!61;UBERON:0001008!5.87e-08!45;UBERON:0003929!6.50e-08!54;UBERON:0000481!1.57e-07!347;UBERON:0008947!1.70e-07!38;UBERON:0003258!1.70e-07!38;UBERON:0000058!6.87e-07!26 | |ontology_enrichment_uberon=UBERON:0004119!2.64e-15!169;UBERON:0000925!2.64e-15!169;UBERON:0006595!2.64e-15!169;UBERON:0005911!6.07e-14!82;UBERON:0005177!1.41e-13!107;UBERON:0001007!1.87e-12!155;UBERON:0001555!1.87e-12!155;UBERON:0007026!1.87e-12!155;UBERON:0002100!3.07e-12!216;UBERON:0000466!3.43e-12!126;UBERON:0000077!3.68e-12!130;UBERON:0004921!3.78e-12!129;UBERON:0004185!3.78e-12!129;UBERON:0003914!6.04e-12!118;UBERON:0009569!4.57e-11!113;UBERON:0003104!6.35e-11!238;UBERON:0009142!6.35e-11!238;UBERON:0001048!3.23e-10!168;UBERON:0000490!2.87e-09!138;UBERON:0001041!3.37e-09!98;UBERON:0000464!1.13e-08!104;UBERON:0006554!2.35e-08!44;UBERON:0005172!3.07e-08!55;UBERON:0005173!3.07e-08!55;UBERON:0005153!3.87e-08!37;UBERON:0002417!5.71e-08!61;UBERON:0000916!5.71e-08!61;UBERON:0001008!5.87e-08!45;UBERON:0003929!6.50e-08!54;UBERON:0000481!1.57e-07!347;UBERON:0008947!1.70e-07!38;UBERON:0003258!1.70e-07!38;UBERON:0000058!6.87e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;2.99e-09;25!UBERON:0002294;8.12e-08;7!UBERON:0001173;8.12e-08;7!UBERON:0000058;2.07e-07;10!UBERON:0001264;2.46e-07;10!UBERON:0000949;4.51e-07;43!UBERON:0004821;7.44e-07;3!UBERON:0007499;7.44e-07;3!UBERON:0003215;7.44e-07;3!UBERON:0010368;7.44e-07;3!UBERON:0009911;7.44e-07;3!UBERON:0002299;7.44e-07;3!UBERON:0006524;7.44e-07;3!UBERON:0008874;7.44e-07;3!UBERON:0002169;7.44e-07;3!UBERON:0004894;7.44e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007499,4.22e-11,25;UBERON:0009856,1.50e-10,26;UBERON:0005911,7.22e-10,82;UBERON:0009497,2.82e-09,25;UBERON:0000015,2.82e-09,25;UBERON:0002423,2.82e-09,25;UBERON:0006235,2.82e-09,25;UBERON:0004161,2.82e-09,25;UBERON:0005177,2.95e-09,101;UBERON:0002100,7.05e-09,199;UBERON:0000949,5.72e-08,45;UBERON:0003929,1.14e-07,54;UBERON:0008835,1.72e-07,22;UBERON:0003894,1.72e-07,22;UBERON:0001264,2.10e-07,10;UBERON:0009854,4.48e-07,23;UBERON:0004821,6.19e-07,3;UBERON:0003215,6.19e-07,3;UBERON:0010368,6.19e-07,3;UBERON:0009911,6.19e-07,3;UBERON:0002299,6.19e-07,3;UBERON:0006524,6.19e-07,3;UBERON:0008874,6.19e-07,3;UBERON:0002169,6.19e-07,3;UBERON:0004894,6.19e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,1.22866968250754,2.09340350391728,0.436882744260345,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.15076305659177,0,0,0,0,0,0.283604451492204,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0,0,1.19257444420023,0,0.347140501607594,0,0.838998872419812,1.10047216776027,0.626984899610432,0,0,0,0,0,0.976248230192678,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0.549605231791222,0,0,0,1.49091585508596,0.633152558322899,0.529636723252875,0.573673241497627,0.354668382198357,3.36406560085384,0,1.2333377420858,0,0.404132016209064,0.490385709340376,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82032272387605,0.718618141816238,0,0,0,0,0,0,1.92834711372036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0.193260853163297,0,0.573609190778008,0.121973706129595,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0,0,0.237270619111097,0.134831308160164,0.588664395376038,0.38474715694639,0,0,1.6462960453256,2.94017422771084,0,0,0,0,1.10689594688802,1.20097467208968,0.219500570817251,0,0.100528972411631,0.185176890317059,0,0,4.3299402607582,0,0.70445216541493,0.144366447761074,0,0,2.37061319387782,6.86788929675898,0,0,0,1.87467667973554,0.16798212819886,0,0.268675568108545,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.775630294546667,0,0,0.531876233169741,1.04007436911366,0,0,0,1.57275793023962,0,0,0,1.42156779497018,0,4.82303003295338,4.35766729300147,3.79897366491817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0.623912584592421,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0,0,1.21251028578504,1.66435439510497,0.30239029332968,0.248107807818777,0,0,0.512556597022804,0,0.321707842287215,1.48418066444991,0.154209693802656,0.355123450626254,0.0821271560138091,0,0,1.93375119346596,0.200506470303285,0.368323955743585,0.68888668898764,0,0,0.902399225814824,0.770153371044148,0.784349769176855,0,0.73886140225013,0,0,0.215915916102139,0,0.812839312631559,1.00337954770971,0.509752546090077,1.66215201785745,0.223874754722178,0,0,0,0,0.976135183992909,0.103041011647722,0,0,0,0,1.6068392984416,0,0.154048617114644,0,0,0,0,0,0,0.330569830721956,0.768760269460425,1.53135254993501,0.10115778085555,0,0,0.6970372701606,0.616067160352178,0.532306030317022,0,0,0.143124886741991,0,0.316379424718726,1.5250415513906,0,0,0,0,0.179872457583315,0.823611089208164,0.117812402345686,1.01091240786658,1.58510321173008,0.421258456238981,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,2.02910376962704,1.239293992399,4.7888252430481,0.286822704408103,0.0982490410131212,0.35667105148125,0,0,0,0,0,0.384888450902048,0.670302275535787,2.17781969722645,0,0.86101074534246,1.68471475667626,0.886860307073351,0,0,0,0,0,0,0,0,0,0.427296284509893,1.92495971052672,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,6.25099522974109,0.47748896947538,0.296964680832639,1.22864280839693,0,0,0.890469640183247,0,0.422250816255987,0.19924798825107,0,0,0.306806047506464,0,0,4.40354920621902,3.40140231883657,0,0.0986434056369336,0,2.22273980289274,0,0,0,4.16684417736373,0.262379999988587,0,0,1.77977555204936,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0.113942055847001,0,0.179515288819544,0.108647371922008,0.31900115973192,0.641183153813036,0,0,0,0,0,0.19606253431774,0.503464760927528,0,0,0.843992258112108,1.14262965711403,1.41353071433941,0.216388639742091,0,0.530745387020035,0,0,0,0,0,0,0,0,1.56531695145672,2.67058417487502,0,0,0.30607276163049,0.063186579628488,0.300646838828985,0,3.32326936353593,0.992975867626496,2.19753042885058,4.77889719091835,0,0.138674673013139,0.694238953340524,0.293977192243133,0.34823682632161,0.34945333648406,0.343972064943233,0,0.146178634172371,0.164230914106418,0,3.26547668758551,0,1.09633539717401,0.19871461170299,0,0.586654148204409,2.56508224804908,1.28071796843612,5.79447867788178,0.864542502924636,0,0.171594997861965,2.3048767678104,1.86378803348149,0.942776138467182,0.407712618220842,0.941425616810999,0.101998217636322,0,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0.630265458457789,0.659326867049332,0.943649613958588,1.57483970423598,0,0,0,0.803765742325096,0.962776056180637,0.415440338029185,0,0,0,0,0.157611414598396,0.104909176269996,0.950403028674658,0.179287339332845,1.15149118391667,0,0,0.5085370753095,0,0.864221491201268,0,1.19730191562487,0.492555124496034,0.170388021785422,1.24643300672138,0,0,0.258565912723101,0,2.05304205461195,0.704815022316672,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,1.72759505875258,0,0,0,0,0,0.0620964029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| ||
|short_description=p5@KRT18 | |short_description=p5@KRT18 | ||
}} | }} |
Latest revision as of 01:15, 19 September 2015
Short description: | p5@KRT18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KRT18_5end |
Coexpression cluster: | NA |
Association with transcript: | 242bp_to_ENST00000548015_5end |
EntrezGene: | KRT18 |
HGNC: | 6430 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.17e-22 | 19 |
epithelial cell | 1.70e-20 | 253 |
squamous epithelial cell | 4.01e-09 | 63 |
lining cell | 3.45e-07 | 58 |
barrier cell | 3.45e-07 | 58 |
pneumocyte | 6.19e-07 | 3 |
endodermal cell | 9.17e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelial sac | 4.22e-11 | 25 |
sac | 1.50e-10 | 26 |
endo-epithelium | 7.22e-10 | 82 |
epithelium of foregut-midgut junction | 2.82e-09 | 25 |
anatomical boundary | 2.82e-09 | 25 |
hepatobiliary system | 2.82e-09 | 25 |
foregut-midgut junction | 2.82e-09 | 25 |
septum transversum | 2.82e-09 | 25 |
trunk region element | 2.95e-09 | 101 |
trunk | 7.05e-09 | 199 |
endocrine system | 5.72e-08 | 45 |
gut epithelium | 1.14e-07 | 54 |
hepatic diverticulum | 1.72e-07 | 22 |
liver primordium | 1.72e-07 | 22 |
pancreas | 2.10e-07 | 10 |
digestive tract diverticulum | 4.48e-07 | 23 |
pulmonary alveolus epithelium | 6.19e-07 | 3 |
alveolus | 6.19e-07 | 3 |
pulmonary lobule | 6.19e-07 | 3 |
lobule | 6.19e-07 | 3 |
alveolus of lung | 6.19e-07 | 3 |
alveolar system | 6.19e-07 | 3 |
pulmonary acinus | 6.19e-07 | 3 |
alveolar sac | 6.19e-07 | 3 |
alveolar wall | 6.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.42e-17 | 143 |
carcinoma | 3.16e-17 | 106 |
adenocarcinoma | 7.73e-16 | 25 |
cancer | 1.43e-13 | 235 |
disease of cellular proliferation | 5.49e-13 | 239 |
endocrine gland cancer | 5.86e-09 | 6 |