FFCP PHASE1:Hg19::chr2:154335173..154335188,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56475 | |EntrezGene=56475 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24201 | |HGNC=24201 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NS64 | |UniProt=Q9NS64 | ||
|association_with_transcript=133bp_to_ENST00000325926,NM_019845,uc002tyq.1_5end | |association_with_transcript=133bp_to_ENST00000325926,NM_019845,uc002tyq.1_5end | ||
|cluster_id=chr2:154335173..154335188,- | |||
|description=CAGE_peak_2_at_RPRM_5end | |description=CAGE_peak_2_at_RPRM_5end | ||
|id=chr2:154335173..154335188,- | |id=chr2:154335173..154335188,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;4.61e-12;5!CL:0002586;2.39e-09;3!CL:0000149;4.44e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.83e-12,5;CL:0002586,2.33e-09,3;CL:0000149,4.37e-07,4;CL:0000540,9.52e-07,6;CL:0000031,9.52e-07,6;CL:0000404,9.52e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.18e-38!86;UBERON:0000073!9.02e-38!94;UBERON:0001016!9.02e-38!94;UBERON:0001017!3.00e-34!82;UBERON:0001049!5.44e-30!57;UBERON:0005068!5.44e-30!57;UBERON:0006241!5.44e-30!57;UBERON:0007135!5.44e-30!57;UBERON:0007023!1.35e-29!115;UBERON:0003075!1.54e-29!86;UBERON:0007284!1.54e-29!86;UBERON:0002346!1.71e-28!90;UBERON:0000955!7.22e-28!69;UBERON:0006238!7.22e-28!69;UBERON:0003056!8.72e-26!61;UBERON:0002780!1.33e-25!41;UBERON:0001890!1.33e-25!41;UBERON:0006240!1.33e-25!41;UBERON:0002616!2.39e-25!59;UBERON:0003080!1.03e-24!42;UBERON:0001893!2.15e-21!34;UBERON:0002020!2.91e-21!34;UBERON:0003528!2.91e-21!34;UBERON:0002791!1.96e-20!33;UBERON:0000033!4.98e-20!123;UBERON:0001869!5.32e-20!32;UBERON:0000153!9.48e-20!129;UBERON:0007811!9.48e-20!129;UBERON:0004121!3.87e-19!169;UBERON:0000924!7.33e-19!173;UBERON:0006601!7.33e-19!173;UBERON:0000956!5.76e-18!25;UBERON:0000203!5.76e-18!25;UBERON:0001950!2.41e-17!20;UBERON:0002619!4.41e-17!22;UBERON:0000200!1.44e-07!6;UBERON:0000966!1.91e-07!5;UBERON:0005388!1.91e-07!5;UBERON:0001802!1.91e-07!5;UBERON:0001872!4.33e-07!5 | |ontology_enrichment_uberon=UBERON:0005743!2.18e-38!86;UBERON:0000073!9.02e-38!94;UBERON:0001016!9.02e-38!94;UBERON:0001017!3.00e-34!82;UBERON:0001049!5.44e-30!57;UBERON:0005068!5.44e-30!57;UBERON:0006241!5.44e-30!57;UBERON:0007135!5.44e-30!57;UBERON:0007023!1.35e-29!115;UBERON:0003075!1.54e-29!86;UBERON:0007284!1.54e-29!86;UBERON:0002346!1.71e-28!90;UBERON:0000955!7.22e-28!69;UBERON:0006238!7.22e-28!69;UBERON:0003056!8.72e-26!61;UBERON:0002780!1.33e-25!41;UBERON:0001890!1.33e-25!41;UBERON:0006240!1.33e-25!41;UBERON:0002616!2.39e-25!59;UBERON:0003080!1.03e-24!42;UBERON:0001893!2.15e-21!34;UBERON:0002020!2.91e-21!34;UBERON:0003528!2.91e-21!34;UBERON:0002791!1.96e-20!33;UBERON:0000033!4.98e-20!123;UBERON:0001869!5.32e-20!32;UBERON:0000153!9.48e-20!129;UBERON:0007811!9.48e-20!129;UBERON:0004121!3.87e-19!169;UBERON:0000924!7.33e-19!173;UBERON:0006601!7.33e-19!173;UBERON:0000956!5.76e-18!25;UBERON:0000203!5.76e-18!25;UBERON:0001950!2.41e-17!20;UBERON:0002619!4.41e-17!22;UBERON:0000200!1.44e-07!6;UBERON:0000966!1.91e-07!5;UBERON:0005388!1.91e-07!5;UBERON:0001802!1.91e-07!5;UBERON:0001872!4.33e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.90e-28;20!UBERON:0002619;2.02e-25;22!UBERON:0000956;5.49e-25;25!UBERON:0000203;5.49e-25;25!UBERON:0001869;1.19e-21;32!UBERON:0001893;5.43e-20;34!UBERON:0002791;3.85e-19;32!UBERON:0003528;2.18e-17;34!UBERON:0002020;2.18e-17;34!UBERON:0002780;1.97e-15;41!UBERON:0001890;1.97e-15;41!UBERON:0001872;6.65e-13;5!UBERON:0000073;2.11e-11;53!UBERON:0002616;2.11e-11;53!UBERON:0000955;3.61e-10;68!UBERON:0000966;1.55e-09;5!UBERON:0005388;1.55e-09;5!UBERON:0001802;1.55e-09;5!UBERON:0001781;2.39e-09;3!UBERON:0001782;2.39e-09;3!UBERON:0001017;4.15e-09;75!UBERON:0002021;1.10e-08;5!UBERON:0000922;1.22e-08;49!UBERON:0001016;5.48e-08;83!UBERON:0000200;7.91e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,2.48e-28,20;UBERON:0002619,1.75e-25,22;UBERON:0000956,4.41e-25,25;UBERON:0000203,4.41e-25,25;UBERON:0001017,1.06e-24,81;UBERON:0001869,1.59e-23,32;UBERON:0001016,7.25e-23,89;UBERON:0001893,7.06e-22,34;UBERON:0003056,1.50e-21,61;UBERON:0002780,1.74e-21,41;UBERON:0001890,1.74e-21,41;UBERON:0003080,1.74e-21,41;UBERON:0006240,1.74e-21,41;UBERON:0000955,2.43e-21,68;UBERON:0006238,2.43e-21,68;UBERON:0002791,5.05e-21,32;UBERON:0003528,1.54e-19,34;UBERON:0002020,1.54e-19,34;UBERON:0001049,2.80e-19,56;UBERON:0005068,2.80e-19,56;UBERON:0006241,2.80e-19,56;UBERON:0007135,2.80e-19,56;UBERON:0000073,8.18e-19,53;UBERON:0002616,8.18e-19,53;UBERON:0003075,2.16e-18,82;UBERON:0007284,2.16e-18,82;UBERON:0002346,3.51e-17,86;UBERON:0010371,3.93e-14,104;UBERON:0004121,4.97e-13,171;UBERON:0000924,4.97e-13,171;UBERON:0006601,4.97e-13,171;UBERON:0001872,7.22e-13,5;UBERON:0010314,2.09e-10,132;UBERON:0011216,2.19e-09,223;UBERON:0001782,2.33e-09,3;UBERON:0005424,2.33e-09,3;UBERON:0007023,8.74e-09,114;UBERON:0002021,9.22e-09,5;UBERON:0000966,6.20e-08,6;UBERON:0005388,6.20e-08,6;UBERON:0001802,6.20e-08,6;UBERON:0001781,4.37e-07,4;UBERON:0000200,7.15e-07,6 | |||
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| ||
|short_description=p2@RPRM | |short_description=p2@RPRM | ||
}} | }} |
Latest revision as of 14:52, 17 September 2015
Short description: | p2@RPRM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPRM_5end |
Coexpression cluster: | NA |
Association with transcript: | 133bp_to_ENST00000325926, NM_019845, uc002tyq.1_5end |
EntrezGene: | RPRM |
HGNC: | 24201 |
UniProt: | Q9NS64 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.83e-12 | 5 |
retinal pigment epithelial cell | 2.33e-09 | 3 |
visual pigment cell | 4.37e-07 | 4 |
neuron | 9.52e-07 | 6 |
neuroblast | 9.52e-07 | 6 |
electrically signaling cell | 9.52e-07 | 6 |