FFCP PHASE1:Hg19::chr1:161167199..161167216,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:161167199..161167216,+
|short_description=p2@NDUFS2
|description=CAGE_peak_2_at_NDUFS2_5end
|association_with_transcript=0bp_to_ENST00000496133_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4720 | |EntrezGene=4720 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7708 | |HGNC=7708 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000496133_5end | |||
|cluster_id=chr1:161167199..161167216,+ | |||
|description=CAGE_peak_2_at_NDUFS2_5end | |||
|id=chr1:161167199..161167216,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.39e-45!180;CL:0000057!7.97e-31!75;CL:0000183!1.83e-21!59;CL:0000680!3.00e-21!57;CL:0000056!3.00e-21!57;CL:0000355!3.00e-21!57;CL:0000187!9.15e-21!54;CL:0000393!1.14e-16!60;CL:0000211!1.14e-16!60;CL:0000192!5.68e-16!42;CL:0000514!5.68e-16!42;CL:0002620!7.58e-15!23;CL:0000048!4.55e-12!430;CL:0000723!3.86e-11!436;CL:0000359!5.60e-11!32;CL:0000034!8.52e-11!444;CL:0000222!2.01e-09!119;CL:0002334!8.77e-08!12;CL:0002371!2.86e-07!591;CL:0002570!4.87e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.94e-23;23!CL:0000057;6.89e-19;73!CL:0000187;2.32e-11;55!CL:0002570;3.24e-10;8!CL:0002334;8.94e-10;12!CL:0000192;1.49e-09;43!CL:0002320;1.93e-09;188!CL:0000393;1.99e-09;61!CL:0000211;1.99e-09;61!CL:0000359;8.06e-09;32!CL:0000188;8.34e-09;9!CL:0000723;9.61e-09;61!CL:0002551;3.39e-08;6!CL:0000134;3.46e-08;55!CL:0002559;5.86e-08;5!CL:0000048;9.18e-08;58!CL:0002556;2.14e-07;6!CL:0002552;3.28e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.89e-45,76;CL:0000048,1.35e-26,427;CL:0000723,1.15e-25,433;CL:0000034,1.84e-24,441;CL:0002620,3.44e-23,23;CL:0000187,3.85e-20,55;CL:0000680,1.31e-19,58;CL:0000056,1.31e-19,58;CL:0000355,1.31e-19,58;CL:0000393,5.36e-17,61;CL:0000211,5.36e-17,61;CL:0000192,7.11e-14,43;CL:0000514,7.11e-14,43;CL:0002320,2.97e-12,361;CL:0000134,5.23e-12,354;CL:0000219,1.05e-10,386;CL:0002570,2.66e-10,8;CL:0002334,5.88e-10,12;CL:0000359,2.25e-09,32;CL:0000188,6.06e-09,9;CL:0002551,3.00e-08,6;CL:0002559,5.18e-08,5;CL:0002552,1.82e-07,5;CL:0002556,4.10e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000355;4.03e-11;58!CL:0000514;1.49e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;7.72e-07;5!DOID:450;7.72e-07;5!DOID:66;7.72e-07;5!DOID:423;7.72e-07;5!DOID:0080000;7.72e-07;5!DOID:11722;7.72e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,9.41e-07,5;DOID:450,9.41e-07,5;DOID:66,9.41e-07,5;DOID:423,9.41e-07,5;DOID:0080000,9.41e-07,5;DOID:11722,9.41e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!9.71e-28!83;UBERON:0002329!9.71e-28!83;UBERON:0003077!9.71e-28!83;UBERON:0003059!9.71e-28!83;UBERON:0007282!9.71e-28!83;UBERON:0009618!9.71e-28!83;UBERON:0007285!9.71e-28!83;UBERON:0004290!2.67e-26!70;UBERON:0002385!1.89e-20!63;UBERON:0001015!1.89e-20!63;UBERON:0000383!1.89e-20!63;UBERON:0000486!3.34e-20!82;UBERON:0001134!3.76e-20!61;UBERON:0002036!3.76e-20!61;UBERON:0003082!3.76e-20!61;UBERON:0002049!3.98e-14!79;UBERON:0007798!3.98e-14!79;UBERON:0000475!4.42e-14!365;UBERON:0005256!2.92e-13!143;UBERON:0002199!2.99e-12!45;UBERON:0002416!2.99e-12!45;UBERON:0003102!1.20e-11!95;UBERON:0001637!2.84e-11!42;UBERON:0003509!2.84e-11!42;UBERON:0004572!2.84e-11!42;UBERON:0002097!7.66e-11!40;UBERON:0000055!1.75e-10!69;UBERON:0004535!4.38e-10!110;UBERON:0001981!2.37e-09!60;UBERON:0007500!2.37e-09!60;UBERON:0004537!2.37e-09!60;UBERON:0006965!2.37e-09!60;UBERON:0000490!2.64e-09!138;UBERON:0001009!2.83e-09!113;UBERON:0004872!3.72e-09!84;UBERON:0004573!3.91e-09!33;UBERON:0004571!3.91e-09!33;UBERON:0002100!5.21e-09!216;UBERON:0002067!4.66e-08!9;UBERON:0004016!4.66e-08!9;UBERON:0010083!4.66e-08!9;UBERON:0000468!6.25e-08!659;UBERON:0001013!1.61e-07!14;UBERON:0000119!1.67e-07!312;UBERON:0000483!7.93e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.11e-13;41!UBERON:0002199;6.47e-13;46!UBERON:0002416;6.47e-13;46!UBERON:0003102;7.08e-12;50!UBERON:0002067;7.79e-12;9!UBERON:0002385;1.33e-09;31!UBERON:0001015;1.33e-09;31!UBERON:0000383;1.33e-09;31!UBERON:0002384;1.68e-09;198!UBERON:0001013;3.69e-09;14!UBERON:0002073;5.86e-08;5!UBERON:0001758;2.14e-07;6!UBERON:0003672;2.14e-07;6!UBERON:0004573;5.90e-07;33!UBERON:0004571;5.90e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.75e-27,73;UBERON:0002329,5.27e-27,71;UBERON:0003059,5.27e-27,71;UBERON:0007282,5.27e-27,71;UBERON:0004290,5.27e-27,71;UBERON:0009618,5.27e-27,71;UBERON:0003077,2.09e-26,72;UBERON:0007285,2.09e-26,72;UBERON:0007503,3.76e-23,78;UBERON:0000486,8.06e-21,83;UBERON:0002199,6.08e-20,46;UBERON:0002416,6.08e-20,46;UBERON:0001134,1.35e-18,62;UBERON:0002036,1.35e-18,62;UBERON:0003082,1.35e-18,62;UBERON:0002097,1.91e-18,41;UBERON:0002385,1.25e-17,64;UBERON:0001015,1.25e-17,64;UBERON:0000383,1.25e-17,64;UBERON:0003102,4.52e-16,99;UBERON:0005256,4.14e-14,122;UBERON:0002067,6.41e-12,9;UBERON:0004016,6.41e-12,9;UBERON:0010083,6.41e-12,9;UBERON:0002384,1.27e-11,371;UBERON:0003104,7.84e-11,160;UBERON:0009142,7.84e-11,160;UBERON:0000490,1.21e-10,148;UBERON:0001013,2.77e-09,14;UBERON:0002100,1.03e-08,199;UBERON:0002073,5.18e-08,5;UBERON:0005086,5.18e-08,5;UBERON:0001758,4.10e-07,6;UBERON:0003672,4.10e-07,6;UBERON:0004573,4.29e-07,33;UBERON:0004571,4.29e-07,33;UBERON:0001637,4.97e-07,42;UBERON:0003509,4.97e-07,42;UBERON:0004572,4.97e-07,42 | |||
|phase1_expression=1.99846217197612,1.2846031433459,1.40954404095971,1.0007329835313,0.446961094427288,1.74467704820074,0,0.631719873426831,2.35067065379855,0.491467873003018,0,0,0,0.247532705920093,0,0,0.602694528023977,3.65155045193687,1.95173119516203,0,0.204000691244253,0.313454721478088,0,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,0.639312809217652,1.0843174571537,0,0.434539556882471,0,0.973269740605272,0.0945348171640679,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,1.13061588384802,0.419499436209906,0.550236083880135,0.835979866147242,0.516833518338658,0.35576626268671,0.33472061276467,0,0,0,1.47065232138347,0,0.892997282840798,0.22452937262617,0.788280363383256,1.53316637465883,0,0.183201743930407,0,0,0,1.49091585508596,2.5326102332916,0.926864265692532,1.14734648299525,1.77334191099179,0,2.1349799145941,0,0.311211035399766,0.538842688278752,0.980771418680752,1.66493170409425,1.72852777344,3.04617861383936,2.18512053781224,4.56377457235559,5.52960118041664,2.46612447151906,2.75184005425824,2.52811452064047,4.89970011011744,2.7023549808589,2.89312187292143,5.94001428641027,2.47266929278557,2.73048408581408,2.87447256726495,2.02003336744879,3.00284447692714,2.49357703935765,1.31693286264251,2.45190236639216,2.25357088359895,0.907457465280168,1.25572744982203,6.19316427573846,4.23863802319124,1.50045548042201,4.53431128649131,2.83404594050192,3.90845398296339,2.53164498361899,2.04617710838517,2.52433774244115,4.14224543890347,3.55621325001386,1.42003837006646,1.20902517873168,3.05209066158878,0,0,0,0.243947412259191,0,0.348581828608555,0.310983165046111,0,0,6.25798129319264,2.57296375277154,4.14404764057442,4.64367928031979,6.49691533502627,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,4.41026134156626,0,0,0,0,0,0.514703430895577,0,0,0,0,1.95484983186195,0,0,0.231860809950154,0.234817388471643,0,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.380987365753014,0.381988425558278,0,0,0.308482478109971,0,0.285826432630578,1.45770409648969,2.61576041299968,1.54010400223995,1.93907573636667,3.57656445851882,2.535908257668,2.39344304926383,2.08014873822732,1.28603687131071,0,0.799266537048298,3.0025378668211,8.13932408087165,3.29296134712308,2.28015329005615,2.13235169245527,1.58390374586686,0,0,0,0,0,0,0,1.14861935834114,1.42636905040718,0.289562613335158,0.205476322550383,1.25342674267927,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0,0.623912584592421,1.60586089917446,2.52323864054295,1.05427273493442,1.20378439891088,0,1.03473071292505,1.32845119707087,1.84369168541703,3.0409265063829,2.54541504701563,1.71571711905428,0,0,0,0,0,0,2.48107807818777,1.99500565274481,1.96462066103151,2.43464383585832,2.55853624533352,0.804269605718038,1.48418066444991,3.39261326365842,3.01854933032316,1.56041596426237,1.03850885836724,1.39452454151951,0,0,0,0.34444334449382,0.364182336013434,0.917870904715969,0,0,0,0,0,0,0.680374821106063,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,1.28225062558195,0,0.325378394664303,0.206082023295445,0,0,0,0.650060246036521,0,1.25671933779759,1.23238893691716,1.99554777143968,1.7918754422989,5.26359199854541,3.0453505721988,1.61930592090592,1.4245125703478,0,0,0,0,3.253918845081,2.20368642781448,2.0911118104818,0.308033580176089,0,4.34966496037536,0.74129687641568,0.143124886741991,1.86079184679834,0.949138274156178,0.762520775695299,2.303080121802,0.42793898803392,4.13664222303718,0.78494864019923,1.79872457583315,1.64722217841633,1.88499843753098,1.2130948894399,1.58510321173008,2.10629228119491,0.48763373908959,0.487426979262569,1.05650146756755,2.32049849393576,0.989838023675989,5.65040583101214,5.51365343546124,1.32687795048244,0,3.47265320560013,1.9676842561399,0.405820753925408,1.8589409885985,1.69017361519345,3.15504974848913,4.32295780457733,0,3.54761064070598,0.422215270595328,0.658589785919804,2.65631221636001,3.84928192269481,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0,0.933118762985422,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.774054819518572,0,0.219385397153973,0,0,0.615602068030377,0,0,0,0,0.31900115973192,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.90392296312213,0,0,0.126621591911757,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0.104602846312333,0,0.577901179803038,0,0.821432273351958,0,0,0,0,0,0,0,0,0,0.134366944973453,2.88239906833923,0,0,0,0,0,0,0,0.272406812223151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| ||
|short_description=p2@NDUFS2 | |||
}} | }} |
Latest revision as of 05:15, 18 September 2015
Short description: | p2@NDUFS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NDUFS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000496133_5end |
EntrezGene: | NDUFS2 |
HGNC: | 7708 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.89e-45 | 76 |
multi fate stem cell | 1.35e-26 | 427 |
somatic stem cell | 1.15e-25 | 433 |
stem cell | 1.84e-24 | 441 |
skin fibroblast | 3.44e-23 | 23 |
muscle cell | 3.85e-20 | 55 |
muscle precursor cell | 1.31e-19 | 58 |
myoblast | 1.31e-19 | 58 |
multi-potent skeletal muscle stem cell | 1.31e-19 | 58 |
electrically responsive cell | 5.36e-17 | 61 |
electrically active cell | 5.36e-17 | 61 |
smooth muscle cell | 7.11e-14 | 43 |
smooth muscle myoblast | 7.11e-14 | 43 |
connective tissue cell | 2.97e-12 | 361 |
mesenchymal cell | 5.23e-12 | 354 |
motile cell | 1.05e-10 | 386 |
mesenchymal stem cell of adipose | 2.66e-10 | 8 |
preadipocyte | 5.88e-10 | 12 |
vascular associated smooth muscle cell | 2.25e-09 | 32 |
cell of skeletal muscle | 6.06e-09 | 9 |
fibroblast of dermis | 3.00e-08 | 6 |
hair follicle cell | 5.18e-08 | 5 |
fibroblast of gingiva | 1.82e-07 | 5 |
fibroblast of periodontium | 4.10e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 9.41e-07 | 5 |
myotonic disease | 9.41e-07 | 5 |
muscle tissue disease | 9.41e-07 | 5 |
myopathy | 9.41e-07 | 5 |
muscular disease | 9.41e-07 | 5 |
myotonic dystrophy | 9.41e-07 | 5 |