FFCP PHASE1:Hg19::chr17:74463679..74463701,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=15 | |EntrezGene=15 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19 | |HGNC=19 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_uc002jro.2_5end | |association_with_transcript=28bp_to_uc002jro.2_5end | ||
|cluster_id=chr17:74463679..74463701,+ | |||
|coexpression_cluster_id=C73 | |coexpression_cluster_id=C73 | ||
|description=CAGE_peak_1_at_AANAT_5end | |description=CAGE_peak_1_at_AANAT_5end | ||
|id=chr17:74463679..74463701,+ | |id=chr17:74463679..74463701,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.87e-25;3!UBERON:0006238;1.46e-07;10 | |||
|ontology_enrichment_disease=DOID:171!1.19e-14!10;DOID:169!4.93e-14!6;DOID:3095!3.72e-10!22;DOID:2994!3.72e-10!22;DOID:3093!1.74e-07!11 | |ontology_enrichment_disease=DOID:171!1.19e-14!10;DOID:169!4.93e-14!6;DOID:3095!3.72e-10!22;DOID:2994!3.72e-10!22;DOID:3093!1.74e-07!11 | ||
|ontology_enrichment_disease_v019=DOID:171;4.58e-08;10!DOID:3095;6.85e-08;22!DOID:2994;6.85e-08;22!DOID:3093;5.31e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.50e-08,10;DOID:3095,6.85e-08,22;DOID:2994,6.85e-08,22;DOID:3093,5.31e-07,11 | |||
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|short_description=p1@AANAT | |short_description=p1@AANAT | ||
}} | }} |
Latest revision as of 15:10, 17 September 2015
Short description: | p1@AANAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AANAT_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | 28bp_to_uc002jro.2_5end |
EntrezGene: | AANAT |
HGNC: | 19 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.30e-37 | 2 |
regional part of epithalamus | 1.30e-37 | 2 |
secretory circumventricular organ | 1.30e-37 | 2 |
circumventricular organ | 1.30e-37 | 2 |
epithalamus | 1.30e-37 | 2 |
gland of diencephalon | 2.26e-19 | 4 |
neuroendocrine gland | 2.26e-19 | 4 |
regional part of diencephalon | 2.26e-19 | 4 |
retina | 4.81e-13 | 6 |
photoreceptor array | 4.81e-13 | 6 |
posterior segment of eyeball | 4.81e-13 | 6 |
diencephalon | 1.68e-11 | 7 |
future diencephalon | 1.68e-11 | 7 |
meninx | 2.49e-10 | 2 |
membrane organ | 2.49e-10 | 2 |
meningeal cluster | 2.49e-10 | 2 |
eye | 2.05e-08 | 21 |
visual system | 2.05e-08 | 21 |
sense organ | 1.97e-07 | 24 |
sensory system | 1.97e-07 | 24 |
entire sense organ system | 1.97e-07 | 24 |
nervous system | 5.98e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.50e-08 | 10 |
germ cell and embryonal cancer | 6.85e-08 | 22 |
germ cell cancer | 6.85e-08 | 22 |
nervous system cancer | 5.31e-07 | 11 |