FFCP PHASE1:Hg19::chr11:57529259..57529338,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1500 | |EntrezGene=1500 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2515 | |HGNC=2515 | ||
|TSSclassifier=strong | |||
|UniProt=O60716,E9PIE5 | |UniProt=O60716,E9PIE5 | ||
|association_with_transcript=0bp_to_ENST00000358694,ENST00000361332,ENST00000361391,ENST00000399050,ENST00000415361,ENST00000426142,ENST00000428599,ENST00000525902,ENST00000526357,ENST00000526772,ENST00000526938,ENST00000527467,ENST00000528232,ENST00000528621,ENST00000529526,ENST00000529873,ENST00000529986,ENST00000530094,ENST00000530748,ENST00000531014,ENST00000532245,ENST00000532463,ENST00000532649,ENST00000532787,ENST00000532844,ENST00000533667,ENST00000534579,uc001nlv.3_5end | |association_with_transcript=0bp_to_ENST00000358694,ENST00000361332,ENST00000361391,ENST00000399050,ENST00000415361,ENST00000426142,ENST00000428599,ENST00000525902,ENST00000526357,ENST00000526772,ENST00000526938,ENST00000527467,ENST00000528232,ENST00000528621,ENST00000529526,ENST00000529873,ENST00000529986,ENST00000530094,ENST00000530748,ENST00000531014,ENST00000532245,ENST00000532463,ENST00000532649,ENST00000532787,ENST00000532844,ENST00000533667,ENST00000534579,uc001nlv.3_5end | ||
|cluster_id=chr11:57529259..57529338,+ | |||
|description=CAGE_peak_1_at_CTNND1_5end | |description=CAGE_peak_1_at_CTNND1_5end | ||
|id=chr11:57529259..57529338,+ | |id=chr11:57529259..57529338,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.48e-16!254;CL:0002139!8.38e-11!24;CL:0000115!3.52e-10!35;CL:0002078!3.87e-09!44;CL:0000071!6.65e-08!18;CL:0002546!6.65e-08!18;CL:0000076!8.86e-07!62 | |ontology_enrichment_celltype=CL:0000066!3.48e-16!254;CL:0002139!8.38e-11!24;CL:0000115!3.52e-10!35;CL:0002078!3.87e-09!44;CL:0000071!6.65e-08!18;CL:0002546!6.65e-08!18;CL:0000076!8.86e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002139;8.91e-11;24!CL:0000115;3.35e-09;36!CL:0000071;6.97e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.90e-16,253;CL:0002139,8.35e-11,24;CL:0000115,1.23e-10,36;CL:0002078,1.47e-09,45;CL:0000071,6.63e-08,18;CL:0002546,6.63e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002546;6.97e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.66e-24!659;UBERON:0000467!1.13e-22!625;UBERON:0000480!3.32e-22!626;UBERON:0000062!1.56e-19!511;UBERON:0000922!1.03e-17!612;UBERON:0002050!6.34e-17!605;UBERON:0005423!6.34e-17!605;UBERON:0000923!1.53e-16!604;UBERON:0005291!1.53e-16!604;UBERON:0006598!1.53e-16!604;UBERON:0002532!1.53e-16!604;UBERON:0004111!1.15e-12!241;UBERON:0000119!9.76e-11!312;UBERON:0000483!1.58e-10!309;UBERON:0000477!3.43e-10!286;UBERON:0004119!4.86e-10!169;UBERON:0000925!4.86e-10!169;UBERON:0006595!4.86e-10!169;UBERON:0000475!1.14e-09!365;UBERON:0000481!1.48e-09!347;UBERON:0005177!3.59e-09!107;UBERON:0001007!1.31e-08!155;UBERON:0001555!1.31e-08!155;UBERON:0007026!1.31e-08!155;UBERON:0000025!3.44e-08!194;UBERON:0001986!6.65e-08!18;UBERON:0004638!6.65e-08!18;UBERON:0004852!6.65e-08!18;UBERON:0000466!8.32e-08!126;UBERON:0000487!5.22e-07!22 | |ontology_enrichment_uberon=UBERON:0000468!3.66e-24!659;UBERON:0000467!1.13e-22!625;UBERON:0000480!3.32e-22!626;UBERON:0000062!1.56e-19!511;UBERON:0000922!1.03e-17!612;UBERON:0002050!6.34e-17!605;UBERON:0005423!6.34e-17!605;UBERON:0000923!1.53e-16!604;UBERON:0005291!1.53e-16!604;UBERON:0006598!1.53e-16!604;UBERON:0002532!1.53e-16!604;UBERON:0004111!1.15e-12!241;UBERON:0000119!9.76e-11!312;UBERON:0000483!1.58e-10!309;UBERON:0000477!3.43e-10!286;UBERON:0004119!4.86e-10!169;UBERON:0000925!4.86e-10!169;UBERON:0006595!4.86e-10!169;UBERON:0000475!1.14e-09!365;UBERON:0000481!1.48e-09!347;UBERON:0005177!3.59e-09!107;UBERON:0001007!1.31e-08!155;UBERON:0001555!1.31e-08!155;UBERON:0007026!1.31e-08!155;UBERON:0000025!3.44e-08!194;UBERON:0001986!6.65e-08!18;UBERON:0004638!6.65e-08!18;UBERON:0004852!6.65e-08!18;UBERON:0000466!8.32e-08!126;UBERON:0000487!5.22e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.97e-08;18!UBERON:0001986;6.97e-08;18!UBERON:0004852;6.97e-08;18!UBERON:0000487;5.58e-07;22!UBERON:0004921;7.94e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,1.18e-17,592;UBERON:0005423,3.41e-17,581;UBERON:0002050,1.32e-14,564;UBERON:0000923,9.73e-14,560;UBERON:0010316,9.73e-14,560;UBERON:0005291,9.73e-14,560;UBERON:0006598,9.73e-14,560;UBERON:0010317,9.73e-14,560;UBERON:0002532,9.73e-14,560;UBERON:0004111,2.11e-12,240;UBERON:0000119,3.08e-10,309;UBERON:0000483,4.93e-10,306;UBERON:0004119,5.18e-10,160;UBERON:0000925,5.18e-10,160;UBERON:0006595,5.18e-10,160;UBERON:0011216,3.77e-09,223;UBERON:0001007,1.52e-08,145;UBERON:0001555,1.52e-08,145;UBERON:0007026,1.52e-08,145;UBERON:0005177,1.95e-08,101;UBERON:0000025,4.41e-08,192;UBERON:0004638,6.63e-08,18;UBERON:0001986,6.63e-08,18;UBERON:0004852,6.63e-08,18;UBERON:0000487,5.21e-07,22 | |||
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| ||
|short_description=p1@CTNND1 | |short_description=p1@CTNND1 | ||
}} | }} |
Latest revision as of 10:50, 18 September 2015
Short description: | p1@CTNND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CTNND1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000358694, ENST00000361332, ENST00000361391, ENST00000399050, ENST00000415361, ENST00000426142, ENST00000428599, ENST00000525902, ENST00000526357, ENST00000526772, ENST00000526938, ENST00000527467, ENST00000528232, ENST00000528621, ENST00000529526, ENST00000529873, ENST00000529986, ENST00000530094, ENST00000530748, ENST00000531014, ENST00000532245, ENST00000532463, ENST00000532649, ENST00000532787, ENST00000532844, ENST00000533667, ENST00000534579, uc001nlv.3_5end |
EntrezGene: | CTNND1 |
HGNC: | 2515 |
UniProt: | O60716E9PIE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.90e-16 | 253 |
endothelial cell of vascular tree | 8.35e-11 | 24 |
endothelial cell | 1.23e-10 | 36 |
meso-epithelial cell | 1.47e-09 | 45 |
blood vessel endothelial cell | 6.63e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.63e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
embryo | 1.18e-17 | 592 |
developing anatomical structure | 3.41e-17 | 581 |
embryonic structure | 1.32e-14 | 564 |
germ layer | 9.73e-14 | 560 |
germ layer / neural crest | 9.73e-14 | 560 |
embryonic tissue | 9.73e-14 | 560 |
presumptive structure | 9.73e-14 | 560 |
germ layer / neural crest derived structure | 9.73e-14 | 560 |
epiblast (generic) | 9.73e-14 | 560 |
anatomical conduit | 2.11e-12 | 240 |
cell layer | 3.08e-10 | 309 |
epithelium | 4.93e-10 | 306 |
endoderm-derived structure | 5.18e-10 | 160 |
endoderm | 5.18e-10 | 160 |
presumptive endoderm | 5.18e-10 | 160 |
organ system subdivision | 3.77e-09 | 223 |
digestive system | 1.52e-08 | 145 |
digestive tract | 1.52e-08 | 145 |
primitive gut | 1.52e-08 | 145 |
trunk region element | 1.95e-08 | 101 |
tube | 4.41e-08 | 192 |
blood vessel endothelium | 6.63e-08 | 18 |
endothelium | 6.63e-08 | 18 |
cardiovascular system endothelium | 6.63e-08 | 18 |
simple squamous epithelium | 5.21e-07 | 22 |