FFCP PHASE1:Hg19::chr6:42928485..42928496,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27232 | |EntrezGene=27232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4415 | |HGNC=4415 | ||
|TSSclassifier=strong | |||
|UniProt=Q14749 | |UniProt=Q14749 | ||
|association_with_transcript=0bp_to_ENST00000372808_5end | |association_with_transcript=0bp_to_ENST00000372808_5end | ||
|cluster_id=chr6:42928485..42928496,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_GNMT_5end | |description=CAGE_peak_1_at_GNMT_5end | ||
|id=chr6:42928485..42928496,+ | |id=chr6:42928485..42928496,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.17e-07!12;CL:0000417!2.17e-07!12;CL:0000668!2.17e-07!12;CL:0000414!2.17e-07!12;CL:0000412!2.17e-07!12;CL:0000182!2.17e-07!12 | |ontology_enrichment_celltype=CL:0000181!2.17e-07!12;CL:0000417!2.17e-07!12;CL:0000668!2.17e-07!12;CL:0000414!2.17e-07!12;CL:0000412!2.17e-07!12;CL:0000182!2.17e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.30e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.74e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.28e-07;11 | |||
|ontology_enrichment_disease=DOID:5093!6.77e-07!4;DOID:1612!6.77e-07!4 | |ontology_enrichment_disease=DOID:5093!6.77e-07!4;DOID:1612!6.77e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;9.15e-12;4!DOID:1612;9.15e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.07e-12,4;DOID:1612,6.07e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-27!115;UBERON:0002530!1.77e-09!59;UBERON:0008835!5.34e-09!22;UBERON:0003894!5.34e-09!22;UBERON:0009854!1.88e-08!23;UBERON:0004921!2.28e-08!129;UBERON:0004185!2.28e-08!129;UBERON:0002368!2.50e-08!35;UBERON:0000466!2.93e-08!126;UBERON:0002365!3.47e-08!31;UBERON:0002330!3.47e-08!31;UBERON:0005911!5.22e-08!82;UBERON:0002107!6.35e-08!19;UBERON:0006925!6.35e-08!19;UBERON:0008836!6.35e-08!19;UBERON:0004111!1.23e-07!241;UBERON:0001041!1.54e-07!98;UBERON:0007499!1.69e-07!25;UBERON:0009497!1.69e-07!25;UBERON:0000015!1.69e-07!25;UBERON:0002423!1.69e-07!25;UBERON:0006235!1.69e-07!25;UBERON:0004161!1.69e-07!25;UBERON:0000481!2.22e-07!347;UBERON:0009569!2.66e-07!113;UBERON:0003929!2.71e-07!54;UBERON:0000475!3.66e-07!365;UBERON:0001007!4.30e-07!155;UBERON:0001555!4.30e-07!155;UBERON:0007026!4.30e-07!155;UBERON:0000062!4.40e-07!511;UBERON:0009856!4.43e-07!26;UBERON:0005057!5.63e-07!26;UBERON:0001048!9.63e-07!168 | |ontology_enrichment_uberon=UBERON:0007023!1.42e-27!115;UBERON:0002530!1.77e-09!59;UBERON:0008835!5.34e-09!22;UBERON:0003894!5.34e-09!22;UBERON:0009854!1.88e-08!23;UBERON:0004921!2.28e-08!129;UBERON:0004185!2.28e-08!129;UBERON:0002368!2.50e-08!35;UBERON:0000466!2.93e-08!126;UBERON:0002365!3.47e-08!31;UBERON:0002330!3.47e-08!31;UBERON:0005911!5.22e-08!82;UBERON:0002107!6.35e-08!19;UBERON:0006925!6.35e-08!19;UBERON:0008836!6.35e-08!19;UBERON:0004111!1.23e-07!241;UBERON:0001041!1.54e-07!98;UBERON:0007499!1.69e-07!25;UBERON:0009497!1.69e-07!25;UBERON:0000015!1.69e-07!25;UBERON:0002423!1.69e-07!25;UBERON:0006235!1.69e-07!25;UBERON:0004161!1.69e-07!25;UBERON:0000481!2.22e-07!347;UBERON:0009569!2.66e-07!113;UBERON:0003929!2.71e-07!54;UBERON:0000475!3.66e-07!365;UBERON:0001007!4.30e-07!155;UBERON:0001555!4.30e-07!155;UBERON:0007026!4.30e-07!155;UBERON:0000062!4.40e-07!511;UBERON:0009856!4.43e-07!26;UBERON:0005057!5.63e-07!26;UBERON:0001048!9.63e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0002365;2.87e-18;31!UBERON:0002330;2.87e-18;31!UBERON:0002107;1.24e-12;19!UBERON:0006925;1.24e-12;19!UBERON:0001829;1.53e-11;2!UBERON:0000007;4.87e-11;2!UBERON:0002368;4.62e-10;33!UBERON:0002423;2.26e-09;25!UBERON:0001044;1.79e-08;6!UBERON:0003293;1.79e-08;6!UBERON:0003294;1.79e-08;6!UBERON:0010047;1.79e-08;6!UBERON:0003408;1.79e-08;6!UBERON:0000167;1.79e-08;6!UBERON:0002530;2.86e-08;57!UBERON:0000949;1.43e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,3.65e-18,31;UBERON:0002330,3.65e-18,31;UBERON:0002530,4.13e-14,59;UBERON:0002107,1.59e-12,19;UBERON:0006925,1.59e-12,19;UBERON:0008836,1.59e-12,19;UBERON:0001829,1.45e-11,2;UBERON:0000007,6.13e-11,2;UBERON:0008835,1.10e-10,22;UBERON:0003894,1.10e-10,22;UBERON:0002368,2.36e-10,35;UBERON:0009854,3.51e-10,23;UBERON:0000949,1.29e-09,45;UBERON:0007499,2.73e-09,25;UBERON:0009497,2.73e-09,25;UBERON:0000015,2.73e-09,25;UBERON:0002423,2.73e-09,25;UBERON:0006235,2.73e-09,25;UBERON:0004161,2.73e-09,25;UBERON:0007023,5.62e-09,114;UBERON:0009856,6.75e-09,26;UBERON:0001044,1.75e-08,6;UBERON:0003293,1.75e-08,6;UBERON:0003294,1.75e-08,6;UBERON:0010047,1.75e-08,6;UBERON:0000167,1.75e-08,6 | |||
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| ||
|short_description=p1@GNMT | |short_description=p1@GNMT | ||
}} | }} |
Latest revision as of 21:02, 18 September 2015
Short description: | p1@GNMT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GNMT_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000372808_5end |
EntrezGene: | GNMT |
HGNC: | 4415 |
UniProt: | Q14749 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.74e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 3.65e-18 | 31 |
exocrine system | 3.65e-18 | 31 |
gland | 4.13e-14 | 59 |
liver | 1.59e-12 | 19 |
digestive gland | 1.59e-12 | 19 |
liver bud | 1.59e-12 | 19 |
major salivary gland | 1.45e-11 | 2 |
pituitary gland | 6.13e-11 | 2 |
hepatic diverticulum | 1.10e-10 | 22 |
liver primordium | 1.10e-10 | 22 |
endocrine gland | 2.36e-10 | 35 |
digestive tract diverticulum | 3.51e-10 | 23 |
endocrine system | 1.29e-09 | 45 |
epithelial sac | 2.73e-09 | 25 |
epithelium of foregut-midgut junction | 2.73e-09 | 25 |
anatomical boundary | 2.73e-09 | 25 |
hepatobiliary system | 2.73e-09 | 25 |
foregut-midgut junction | 2.73e-09 | 25 |
septum transversum | 2.73e-09 | 25 |
adult organism | 5.62e-09 | 114 |
sac | 6.75e-09 | 26 |
saliva-secreting gland | 1.75e-08 | 6 |
gland of oral region | 1.75e-08 | 6 |
gland of foregut | 1.75e-08 | 6 |
oral gland | 1.75e-08 | 6 |
oral cavity | 1.75e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.07e-12 | 4 |
breast cancer | 6.07e-12 | 4 |