FFCP PHASE1:Hg19::chr1:63788229..63788250,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27022 | |EntrezGene=27022 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3804 | |HGNC=3804 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJU5 | |UniProt=Q9UJU5 | ||
|association_with_transcript=-479bp_to_ENST00000371116,NM_012183,uc001dax.2_5end | |association_with_transcript=-479bp_to_ENST00000371116,NM_012183,uc001dax.2_5end | ||
|cluster_id=chr1:63788229..63788250,+ | |||
|coexpression_cluster_id=C1775 | |coexpression_cluster_id=C1775 | ||
|description=CAGE_peak_1_at_FOXD3_5end | |description=CAGE_peak_1_at_FOXD3_5end | ||
|id=chr1:63788229..63788250,+ | |id=chr1:63788229..63788250,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.34e-12!10;CL:0000541!1.34e-12!10;CL:0000147!5.28e-08!14;CL:0002322!2.53e-07!5 | |ontology_enrichment_celltype=CL:0000148!1.34e-12!10;CL:0000541!1.34e-12!10;CL:0000147!5.28e-08!14;CL:0002322!2.53e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000148;6.17e-25;10!CL:0000147;4.21e-17;14!CL:0002322;8.57e-14;5!CL:0000710;1.42e-13;20!CL:0002321;2.56e-12;15!CL:0000075;2.31e-09;27!CL:0002567;6.91e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.39e-25,10;CL:0000541,5.39e-25,10;CL:0000147,3.84e-17,14;CL:0002322,8.53e-14,5;CL:0000710,1.25e-13,20;CL:0000075,2.11e-09,27;CL:0002567,7.03e-09,3;CL:0000133,6.64e-08,59;CL:0000333,4.82e-07,41;CL:0002077,6.03e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.53e-15;10!UBERON:0005564;6.53e-15;10 | |||
|ontology_enrichment_disease=DOID:3095!8.49e-08!22;DOID:2994!8.49e-08!22;DOID:0050687!3.44e-07!143 | |ontology_enrichment_disease=DOID:3095!8.49e-08!22;DOID:2994!8.49e-08!22;DOID:0050687!3.44e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.21e-07;22!DOID:2994;1.21e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.34e-07,22;DOID:2994,1.34e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0003135!1.14e-09!11;UBERON:0007023!1.44e-08!115;UBERON:0000473!2.95e-07!8 | |ontology_enrichment_uberon=UBERON:0003135!1.14e-09!11;UBERON:0007023!1.44e-08!115;UBERON:0000473!2.95e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.33e-20;49!UBERON:0003135;3.84e-16;11!UBERON:0000473;2.43e-14;8!UBERON:0003101;8.62e-09;22!UBERON:0000079;8.62e-09;22!UBERON:0000991;7.55e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,4.90e-16,11;UBERON:0000473,3.10e-14,8;UBERON:0003101,8.91e-09,22;UBERON:0000079,8.91e-09,22;UBERON:0000991,8.44e-08,21;UBERON:0009196,8.44e-08,21;UBERON:0009117,8.44e-08,21;UBERON:0005564,8.44e-08,21;UBERON:0004176,2.30e-07,22 | |||
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| ||
|short_description=p1@FOXD3 | |short_description=p1@FOXD3 | ||
}} | }} |
Latest revision as of 20:41, 18 September 2015
Short description: | p1@FOXD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FOXD3_5end |
Coexpression cluster: | C1775_neuroblastoma_iPS_testicular_H9_HES3GFP_skeletal_Melanocyte |
Association with transcript: | -479bp_to_ENST00000371116, NM_012183, uc001dax.2_5end |
EntrezGene: | FOXD3 |
HGNC: | 3804 |
UniProt: | Q9UJU5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.39e-25 | 10 |
melanoblast | 5.39e-25 | 10 |
pigment cell | 3.84e-17 | 14 |
embryonic stem cell | 8.53e-14 | 5 |
neurecto-epithelial cell | 1.25e-13 | 20 |
columnar/cuboidal epithelial cell | 2.11e-09 | 27 |
light melanocyte | 7.03e-09 | 3 |
neurectodermal cell | 6.64e-08 | 59 |
migratory neural crest cell | 4.82e-07 | 41 |
ecto-epithelial cell | 6.03e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 4.90e-16 | 11 |
testis | 3.10e-14 | 8 |
male organism | 8.91e-09 | 22 |
male reproductive system | 8.91e-09 | 22 |
gonad | 8.44e-08 | 21 |
indifferent external genitalia | 8.44e-08 | 21 |
indifferent gonad | 8.44e-08 | 21 |
gonad primordium | 8.44e-08 | 21 |
external genitalia | 2.30e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.34e-07 | 22 |
germ cell cancer | 1.34e-07 | 22 |