FFCP PHASE1:Hg19::chr19:35633431..35633477,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=163175 | |EntrezGene=163175 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18712 | |HGNC=18712 | ||
|TSSclassifier=strong | |||
|UniProt=Q658V8 | |UniProt=Q658V8 | ||
|association_with_transcript=-76bp_to_ENST00000493050,uc002nxy.1_5end | |association_with_transcript=-76bp_to_ENST00000493050,uc002nxy.1_5end | ||
|cluster_id=chr19:35633431..35633477,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_5_at_LGI4_5end | |description=CAGE_peak_5_at_LGI4_5end | ||
|id=chr19:35633431..35633477,- | |id=chr19:35633431..35633477,- | ||
|ontology_enrichment_celltype=CL:0002322;8.80e-12;5 | |ontology_enrichment_celltype=CL:0002322!6.74e-14!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0002322;8.80e-12;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.23e-11,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.93e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002619;9.76e-60;22!UBERON:0001950;2.91e-57;20!UBERON:0000956;1.69e-52;25!UBERON:0000203;1.69e-52;25!UBERON:0001869;1.42e-47;32!UBERON:0001893;2.37e-43;34!UBERON:0002791;1.82e-41;32!UBERON:0003528;6.38e-40;34!UBERON:0002020;6.38e-40;34!UBERON:0002780;6.31e-28;41!UBERON:0001890;6.31e-28;41!UBERON:0001872;6.14e-21;5!UBERON:0000073;5.65e-18;53!UBERON:0002616;5.65e-18;53!UBERON:0000955;2.23e-17;68!UBERON:0000200;2.40e-17;6!UBERON:0001017;4.85e-16;75!UBERON:0001871;6.80e-15;6!UBERON:0001016;1.02e-12;83!UBERON:0002021;3.79e-12;5!UBERON:0000349;5.03e-12;5!UBERON:0001870;1.02e-09;3!UBERON:0002022;5.58e-08;1!UBERON:0002581;9.13e-08;1!UBERON:0003112;9.13e-08;1!UBERON:0011158;9.13e-08;1!UBERON:0007190;9.13e-08;1!UBERON:0003128;9.13e-08;1!UBERON:0001703;9.13e-08;1!UBERON:0002241;9.13e-08;1!UBERON:0000922;1.21e-07;49!UBERON:0002902;1.48e-07;1!UBERON:0001882;1.48e-07;1!UBERON:0009899;1.48e-07;1!UBERON:0005403;1.48e-07;1 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.00e-49!22;UBERON:0001893!2.32e-47!34;UBERON:0001869!4.90e-47!32;UBERON:0001950!6.29e-45!20;UBERON:0002791!7.20e-45!33;UBERON:0001017!8.05e-44!82;UBERON:0005743!1.67e-43!86;UBERON:0000956!2.94e-43!25;UBERON:0000203!2.94e-43!25;UBERON:0002780!2.24e-41!41;UBERON:0001890!2.24e-41!41;UBERON:0006240!2.24e-41!41;UBERON:0003080!3.16e-40!42;UBERON:0002020!4.37e-40!34;UBERON:0003528!4.37e-40!34;UBERON:0001049!1.78e-39!57;UBERON:0005068!1.78e-39!57;UBERON:0006241!1.78e-39!57;UBERON:0007135!1.78e-39!57;UBERON:0000073!2.24e-38!94;UBERON:0001016!2.24e-38!94;UBERON:0000955!6.49e-38!69;UBERON:0006238!6.49e-38!69;UBERON:0002616!2.52e-35!59;UBERON:0003075!1.74e-34!86;UBERON:0007284!1.74e-34!86;UBERON:0002346!1.68e-32!90;UBERON:0003056!1.14e-29!61;UBERON:0007023!5.32e-22!115;UBERON:0004121!5.07e-20!169;UBERON:0000033!6.50e-20!123;UBERON:0000924!2.68e-19!173;UBERON:0006601!2.68e-19!173;UBERON:0000153!1.52e-18!129;UBERON:0007811!1.52e-18!129;UBERON:0000200!6.23e-17!6;UBERON:0001871!2.09e-16!7;UBERON:0001872!1.47e-14!5;UBERON:0000349!1.06e-13!5;UBERON:0002021!1.82e-09!5;UBERON:0002771!4.75e-09!3;UBERON:0000025!2.29e-08!194;UBERON:0001870!4.36e-07!2;UBERON:0002420!4.81e-07!9;UBERON:0007245!4.81e-07!9;UBERON:0010009!4.81e-07!9;UBERON:0010011!4.81e-07!9;UBERON:0000454!4.81e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.76e-60;22!UBERON:0001950;2.91e-57;20!UBERON:0000956;1.69e-52;25!UBERON:0000203;1.69e-52;25!UBERON:0001869;1.42e-47;32!UBERON:0001893;2.37e-43;34!UBERON:0002791;1.82e-41;32!UBERON:0003528;6.38e-40;34!UBERON:0002020;6.38e-40;34!UBERON:0002780;6.31e-28;41!UBERON:0001890;6.31e-28;41!UBERON:0001872;6.14e-21;5!UBERON:0000073;5.65e-18;53!UBERON:0002616;5.65e-18;53!UBERON:0000955;2.23e-17;68!UBERON:0000200;2.40e-17;6!UBERON:0001017;4.85e-16;75!UBERON:0001871;6.80e-15;6!UBERON:0001016;1.02e-12;83!UBERON:0002021;3.79e-12;5!UBERON:0000349;5.03e-12;5!UBERON:0001870;1.02e-09;3!UBERON:0002022;5.58e-08;1!UBERON:0002581;9.13e-08;1!UBERON:0003112;9.13e-08;1!UBERON:0011158;9.13e-08;1!UBERON:0007190;9.13e-08;1!UBERON:0003128;9.13e-08;1!UBERON:0001703;9.13e-08;1!UBERON:0002241;9.13e-08;1!UBERON:0000922;1.21e-07;49!UBERON:0002902;1.48e-07;1!UBERON:0001882;1.48e-07;1!UBERON:0009899;1.48e-07;1!UBERON:0005403;1.48e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,7.79e-60,22;UBERON:0001950,2.42e-57,20;UBERON:0001869,1.03e-52,32;UBERON:0000956,1.39e-52,25;UBERON:0000203,1.39e-52,25;UBERON:0001893,1.68e-49,34;UBERON:0002791,1.69e-46,32;UBERON:0003528,1.18e-43,34;UBERON:0002020,1.18e-43,34;UBERON:0002780,1.14e-40,41;UBERON:0001890,1.14e-40,41;UBERON:0003080,1.14e-40,41;UBERON:0006240,1.14e-40,41;UBERON:0001017,6.09e-36,81;UBERON:0000955,1.44e-32,68;UBERON:0006238,1.44e-32,68;UBERON:0001016,5.59e-32,89;UBERON:0000073,7.46e-31,53;UBERON:0002616,7.46e-31,53;UBERON:0001049,4.81e-29,56;UBERON:0005068,4.81e-29,56;UBERON:0006241,4.81e-29,56;UBERON:0007135,4.81e-29,56;UBERON:0003056,2.03e-26,61;UBERON:0001872,6.63e-21,5;UBERON:0003075,7.68e-19,82;UBERON:0007284,7.68e-19,82;UBERON:0002346,8.20e-18,86;UBERON:0000200,2.40e-17,6;UBERON:0001871,6.34e-15,6;UBERON:0004121,9.87e-15,171;UBERON:0000924,9.87e-15,171;UBERON:0006601,9.87e-15,171;UBERON:0007023,2.17e-14,114;UBERON:0010371,3.72e-14,104;UBERON:0011216,1.31e-12,223;UBERON:0002021,3.45e-12,5;UBERON:0000349,4.17e-12,5;UBERON:0010314,6.68e-12,132;UBERON:0001870,9.96e-10,3;UBERON:0002022,5.22e-08,1;UBERON:0007190,7.76e-08,1;UBERON:0003112,1.15e-07,1;UBERON:0011158,1.15e-07,1;UBERON:0003128,1.15e-07,1;UBERON:0001703,1.15e-07,1;UBERON:0002241,1.15e-07,1;UBERON:0004761,1.15e-07,1;UBERON:0009617,1.15e-07,1;UBERON:0002581,1.22e-07,1;UBERON:0001882,1.30e-07,1;UBERON:0005403,1.30e-07,1;UBERON:0002902,1.48e-07,1;UBERON:0009899,1.48e-07,1 | |||
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|short_description=p5@LGI4 | |short_description=p5@LGI4 | ||
}} | }} |
Latest revision as of 10:23, 17 September 2015
Short description: | p5@LGI4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LGI4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -76bp_to_ENST00000493050, uc002nxy.1_5end |
EntrezGene: | LGI4 |
HGNC: | 18712 |
UniProt: | Q658V8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.23e-11 | 5 |