FFCP PHASE1:Hg19::chr11:102511849..102511862,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:102511849..102511862,+ | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_at_chr11:102511849..102511862,+ | |description=CAGE_peak_at_chr11:102511849..102511862,+ | ||
|id=chr11:102511849..102511862,+ | |id=chr11:102511849..102511862,+ | ||
|ontology_enrichment_celltype=CL:0000182;2.98e-25;12 | |ontology_enrichment_celltype=CL:0000181!4.47e-11!12;CL:0000417!4.47e-11!12;CL:0000668!4.47e-11!12;CL:0000414!4.47e-11!12;CL:0000412!4.47e-11!12;CL:0000182!4.47e-11!12 | ||
| | |ontology_enrichment_celltype_v019=CL:0000182;2.98e-25;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.98e-25,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002107;3.54e-28;19!UBERON:0006925;3.54e-28;19!UBERON:0002423;1.35e-21;25!UBERON:0002365;4.09e-18;31!UBERON:0002330;4.09e-18;31!UBERON:0002368;1.39e-14;33!UBERON:0000949;2.99e-12;43!UBERON:0005172;4.80e-09;52!UBERON:0005173;4.80e-09;52!UBERON:0002530;7.98e-07;57 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.17e-10!19;UBERON:0006925!1.17e-10!19;UBERON:0008836!1.17e-10!19;UBERON:0008835!3.53e-09!22;UBERON:0003894!3.53e-09!22;UBERON:0009854!9.03e-09!23;UBERON:0004921!3.75e-08!129;UBERON:0004185!3.75e-08!129;UBERON:0009569!4.05e-08!113;UBERON:0007499!4.73e-08!25;UBERON:0009497!4.73e-08!25;UBERON:0000015!4.73e-08!25;UBERON:0002423!4.73e-08!25;UBERON:0006235!4.73e-08!25;UBERON:0004161!4.73e-08!25;UBERON:0005057!9.83e-08!26;UBERON:0009856!9.83e-08!26;UBERON:0005177!3.28e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.54e-28;19!UBERON:0006925;3.54e-28;19!UBERON:0002423;1.35e-21;25!UBERON:0002365;4.09e-18;31!UBERON:0002330;4.09e-18;31!UBERON:0002368;1.39e-14;33!UBERON:0000949;2.99e-12;43!UBERON:0005172;4.80e-09;52!UBERON:0005173;4.80e-09;52!UBERON:0002530;7.98e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.54e-28,19;UBERON:0006925,3.54e-28,19;UBERON:0008836,3.54e-28,19;UBERON:0008835,1.93e-24,22;UBERON:0003894,1.93e-24,22;UBERON:0009854,2.07e-23,23;UBERON:0007499,1.35e-21,25;UBERON:0009497,1.35e-21,25;UBERON:0000015,1.35e-21,25;UBERON:0002423,1.35e-21,25;UBERON:0006235,1.35e-21,25;UBERON:0004161,1.35e-21,25;UBERON:0009856,8.56e-21,26;UBERON:0002365,1.49e-17,31;UBERON:0002330,1.49e-17,31;UBERON:0002368,1.27e-15,35;UBERON:0000949,2.74e-12,45;UBERON:0003929,2.46e-10,54;UBERON:0005172,2.46e-10,54;UBERON:0005173,2.46e-10,54;UBERON:0002530,1.66e-09,59;UBERON:0002417,2.35e-09,60;UBERON:0000916,2.35e-09,60;UBERON:0005911,5.63e-07,82 | |||
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|short_description=p@chr11:102511849..102511862,+ | |short_description=p@chr11:102511849..102511862,+ | ||
}} | }} |
Latest revision as of 17:29, 23 July 2015
Short description: | p@chr11:102511849..102511862, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:102511849..102511862, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.98e-25 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.54e-28 | 19 |
digestive gland | 3.54e-28 | 19 |
liver bud | 3.54e-28 | 19 |
hepatic diverticulum | 1.93e-24 | 22 |
liver primordium | 1.93e-24 | 22 |
digestive tract diverticulum | 2.07e-23 | 23 |
epithelial sac | 1.35e-21 | 25 |
epithelium of foregut-midgut junction | 1.35e-21 | 25 |
anatomical boundary | 1.35e-21 | 25 |
hepatobiliary system | 1.35e-21 | 25 |
foregut-midgut junction | 1.35e-21 | 25 |
septum transversum | 1.35e-21 | 25 |
sac | 8.56e-21 | 26 |
exocrine gland | 1.49e-17 | 31 |
exocrine system | 1.49e-17 | 31 |
endocrine gland | 1.27e-15 | 35 |
endocrine system | 2.74e-12 | 45 |
gut epithelium | 2.46e-10 | 54 |
abdomen element | 2.46e-10 | 54 |
abdominal segment element | 2.46e-10 | 54 |
gland | 1.66e-09 | 59 |
abdominal segment of trunk | 2.35e-09 | 60 |
abdomen | 2.35e-09 | 60 |
endo-epithelium | 5.63e-07 | 82 |