FFCP PHASE1:Hg19::chr1:156786260..156786268,-: Difference between revisions
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|id=chr1:156786260..156786268,-
|short_description=p15@SH2D2A
|description=CAGE_peak_15_at_SH2D2A_5end
|association_with_transcript=-321bp_to_NM_001161443,uc001fqc....") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9047 | |EntrezGene=9047 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10821 | |HGNC=10821 | ||
|TSSclassifier=strong | |||
|UniProt=Q5UBZ3,Q9NP31 | |UniProt=Q5UBZ3,Q9NP31 | ||
|association_with_transcript=-321bp_to_NM_001161443,uc001fqc.1_5end | |||
|cluster_id=chr1:156786260..156786268,- | |||
|coexpression_cluster_id=C73 | |||
|description=CAGE_peak_15_at_SH2D2A_5end | |||
|id=chr1:156786260..156786268,- | |||
|ontology_enrichment_celltype=CL:0000080!1.42e-17!6;CL:0000623!5.49e-10!3;CL:0000825!5.49e-10!3;CL:0002621!6.28e-10!3;CL:0000842!1.03e-09!3;CL:0000838!6.26e-09!52;CL:0000542!9.80e-09!53;CL:0000051!9.80e-09!53;CL:0000988!3.62e-08!182;CL:0002087!4.08e-08!119;CL:0002127!8.12e-08!1;CL:0000914!8.12e-08!1;CL:0000911!8.12e-08!1;CL:0000814!8.12e-08!1;CL:0002042!8.12e-08!1;CL:0002039!8.12e-08!1;CL:0002040!8.12e-08!1;CL:0002041!8.12e-08!1;CL:0000738!1.14e-07!140;CL:0000224!1.70e-07!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!5.40e-08!1;DOID:0060061!5.40e-08!1;DOID:8691!5.40e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:4556;4.09e-23;3!DOID:3908;1.83e-14;5!DOID:3905;1.21e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,4.09e-23,3;DOID:3908,1.83e-14,5;DOID:3905,1.21e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0001905!2.80e-15!2;UBERON:0002757!2.80e-15!2;UBERON:0010134!2.80e-15!2;UBERON:0002784!2.80e-15!2;UBERON:0005408!2.80e-15!2;UBERON:0001899!2.80e-15!2;UBERON:0000178!7.40e-11!15;UBERON:0000179!7.40e-11!15;UBERON:0000463!7.40e-11!15;UBERON:0001949!6.28e-10!3;UBERON:0003296!4.56e-08!4;UBERON:0010133!4.56e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.61e-131;2!UBERON:0002757;4.61e-131;2!UBERON:0010134;4.61e-131;2!UBERON:0005408;4.61e-131;2!UBERON:0001899;4.61e-131;2!UBERON:0003296;2.40e-66;4!UBERON:0010133;2.40e-66;4!UBERON:0002784;2.40e-66;4!UBERON:0001894;1.49e-38;7!UBERON:0002368;5.41e-08;33!UBERON:0000949;5.43e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.61e-131,2;UBERON:0002757,4.61e-131,2;UBERON:0010134,4.61e-131,2;UBERON:0005408,4.61e-131,2;UBERON:0001899,4.61e-131,2;UBERON:0003296,2.40e-66,4;UBERON:0010133,2.40e-66,4;UBERON:0002784,2.40e-66,4;UBERON:0001894,1.49e-38,7;UBERON:0006222,1.49e-38,7;UBERON:0002368,1.09e-08,35;UBERON:0002780,2.04e-07,41;UBERON:0001890,2.04e-07,41;UBERON:0003080,2.04e-07,41;UBERON:0006240,2.04e-07,41;UBERON:0000949,5.42e-07,45 | |||
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|short_description=p15@SH2D2A | |||
}} | }} |
Latest revision as of 18:24, 17 September 2015
Short description: | p15@SH2D2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SH2D2A_5end |
Coexpression cluster: | C73_pineal_eye_retina_caudate_cerebellum_left_parietal |
Association with transcript: | -321bp_to_NM_001161443, uc001fqc.1_5end |
EntrezGene: | SH2D2A |
HGNC: | 10821 |
UniProt: | Q5UBZ3Q9NP31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 4.61e-131 | 2 |
regional part of epithalamus | 4.61e-131 | 2 |
secretory circumventricular organ | 4.61e-131 | 2 |
circumventricular organ | 4.61e-131 | 2 |
epithalamus | 4.61e-131 | 2 |
gland of diencephalon | 2.40e-66 | 4 |
neuroendocrine gland | 2.40e-66 | 4 |
regional part of diencephalon | 2.40e-66 | 4 |
diencephalon | 1.49e-38 | 7 |
future diencephalon | 1.49e-38 | 7 |
endocrine gland | 1.09e-08 | 35 |
regional part of forebrain | 2.04e-07 | 41 |
forebrain | 2.04e-07 | 41 |
anterior neural tube | 2.04e-07 | 41 |
future forebrain | 2.04e-07 | 41 |
endocrine system | 5.42e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 4.09e-23 | 3 |
non-small cell lung carcinoma | 1.83e-14 | 5 |
lung carcinoma | 1.21e-08 | 9 |