FFCP PHASE1:Hg19::chr19:13135566..13135577,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4784 | |EntrezGene=4784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7788 | |HGNC=7788 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-192bp_to_uc002mwg.1_5end | |association_with_transcript=-192bp_to_uc002mwg.1_5end | ||
|cluster_id=chr19:13135566..13135577,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_9_at_NFIX_5end | |description=CAGE_peak_9_at_NFIX_5end | ||
|id=chr19:13135566..13135577,+ | |id=chr19:13135566..13135577,+ | ||
|ontology_enrichment_celltype=CL:0002319;5.49e-07;25!CL:0002603;8.47e-07;3 | |ontology_enrichment_celltype=CL:0000055!1.81e-09!180;CL:0000057!1.22e-08!75 | ||
| | |ontology_enrichment_celltype_v019=CL:0002319;5.49e-07;25!CL:0002603;8.47e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.60e-07,25;CL:0002603,6.43e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.88e-13;82!UBERON:0006215;1.76e-08;3!UBERON:0006241;5.64e-07;3!UBERON:0003057;5.64e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002619;1.69e-45;22!UBERON:0000956;6.35e-43;25!UBERON:0000203;6.35e-43;25!UBERON:0001950;1.95e-41;20!UBERON:0001893;3.14e-39;34!UBERON:0003528;1.41e-38;34!UBERON:0002020;1.41e-38;34!UBERON:0001869;3.03e-38;32!UBERON:0002791;2.53e-37;32!UBERON:0000073;3.40e-36;53!UBERON:0002616;3.40e-36;53!UBERON:0002780;4.85e-33;41!UBERON:0001890;4.85e-33;41!UBERON:0001017;9.32e-26;75!UBERON:0004732;1.41e-25;13!UBERON:0000955;2.89e-25;68!UBERON:0004733;5.54e-24;12!UBERON:0002028;5.54e-24;12!UBERON:0001016;6.06e-23;83!UBERON:0002680;1.14e-18;9!UBERON:0001895;1.14e-18;9!UBERON:0000200;1.81e-14;6!UBERON:0002037;1.47e-13;6!UBERON:0002021;9.51e-13;5!UBERON:0001872;1.41e-12;5!UBERON:0002298;3.96e-12;6!UBERON:0001871;2.89e-11;6!UBERON:0007023;3.10e-10;114!UBERON:0011216;1.01e-09;132!UBERON:0001870;4.64e-08;3!UBERON:0000349;2.17e-07;5!UBERON:0001896;5.64e-07;3!UBERON:0002240;5.64e-07;3!UBERON:0005174;5.64e-07;3!UBERON:0005290;5.64e-07;3!UBERON:0001137;5.64e-07;3!UBERON:0000988;8.47e-07;3 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.79e-07,3;DOID:127,4.79e-07,3 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002619;1.69e-45;22!UBERON:0000956;6.35e-43;25!UBERON:0000203;6.35e-43;25!UBERON:0001950;1.95e-41;20!UBERON:0001893;3.14e-39;34!UBERON:0003528;1.41e-38;34!UBERON:0002020;1.41e-38;34!UBERON:0001869;3.03e-38;32!UBERON:0002791;2.53e-37;32!UBERON:0000073;3.40e-36;53!UBERON:0002616;3.40e-36;53!UBERON:0002780;4.85e-33;41!UBERON:0001890;4.85e-33;41!UBERON:0001017;9.32e-26;75!UBERON:0004732;1.41e-25;13!UBERON:0000955;2.89e-25;68!UBERON:0004733;5.54e-24;12!UBERON:0002028;5.54e-24;12!UBERON:0001016;6.06e-23;83!UBERON:0002680;1.14e-18;9!UBERON:0001895;1.14e-18;9!UBERON:0000200;1.81e-14;6!UBERON:0002037;1.47e-13;6!UBERON:0002021;9.51e-13;5!UBERON:0001872;1.41e-12;5!UBERON:0002298;3.96e-12;6!UBERON:0001871;2.89e-11;6!UBERON:0007023;3.10e-10;114!UBERON:0011216;1.01e-09;132!UBERON:0001870;4.64e-08;3!UBERON:0000349;2.17e-07;5!UBERON:0001896;5.64e-07;3!UBERON:0002240;5.64e-07;3!UBERON:0005174;5.64e-07;3!UBERON:0005290;5.64e-07;3!UBERON:0001137;5.64e-07;3!UBERON:0000988;8.47e-07;3 | |||
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| ||
|short_description=p9@NFIX | |short_description=p9@NFIX | ||
}} | }} |
Latest revision as of 23:12, 15 September 2015
Short description: | p9@NFIX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NFIX_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -192bp_to_uc002mwg.1_5end |
EntrezGene: | NFIX |
HGNC: | 7788 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.60e-07 | 25 |
astrocyte of the cerebellum | 6.43e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.79e-07 | 3 |
leiomyoma | 4.79e-07 | 3 |