FFCP PHASE1:Hg19::chr10:34987997..34988013,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:34987997..34988013,- | |||
|coexpression_cluster_id=C125 | |coexpression_cluster_id=C125 | ||
|description=CAGE_peak_at_chr10:34987997..34988013,- | |description=CAGE_peak_at_chr10:34987997..34988013,- | ||
|id=chr10:34987997..34988013,- | |id=chr10:34987997..34988013,- | ||
|ontology_enrichment_celltype=CL:0000319;1.84e-34;1!CL:0000159;5.48e-18;2!CL:0000239;3.06e-12;3!CL:1000615;3.06e-12;3!CL:0002306;3.06e-12;3!CL:1000497;9.43e-09;17!CL:0002518;9.43e-09;17!CL:0002149;9.23e-07;6!CL:0002255;9.23e-07;6 | |ontology_enrichment_celltype=CL:1000497!5.06e-14!18;CL:0002518!5.06e-14!18;CL:0000159!4.94e-12!2;CL:1000449!1.07e-11!16;CL:1000507!3.11e-11!12;CL:1000494!3.11e-11!12;CL:0002681!2.29e-10!13;CL:0002584!2.29e-10!13;CL:0000066!9.96e-09!254;CL:0000319!4.09e-07!1 | ||
| | |ontology_enrichment_celltype_v019=CL:0000319;1.84e-34;1!CL:0000159;5.48e-18;2!CL:0000239;3.06e-12;3!CL:1000615;3.06e-12;3!CL:0002306;3.06e-12;3!CL:1000497;9.43e-09;17!CL:0002518;9.43e-09;17!CL:0002149;9.23e-07;6!CL:0002255;9.23e-07;6 | ||
|ontology_enrichment_disease=DOID:3030;1.84e-34;1!DOID:4468;9.07e-18;2!DOID:299;1.20e-12;25!DOID:3001;9.23e-07;6 | |ontology_enrichment_celltype_v019_2=CL:0000319,1.84e-34,1;CL:0000159,5.48e-18,2;CL:0000239,3.24e-12,3;CL:1000615,3.24e-12,3;CL:0002306,3.24e-12,3;CL:1000497,9.62e-09,17;CL:0002518,9.62e-09,17;CL:0002149,8.97e-07,6;CL:0002255,8.97e-07,6 | ||
|ontology_enrichment_uberon=UBERON:0006853;3.06e-12;3!UBERON:0007685;3.06e-12;3!UBERON:0004134;3.06e-12;3 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:4468!2.85e-12!2;DOID:299!4.97e-10!25;DOID:3030!4.09e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3030;1.84e-34;1!DOID:4468;9.07e-18;2!DOID:299;1.20e-12;25!DOID:3001;9.23e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.84e-34,1;DOID:4468,9.07e-18,2;DOID:299,1.18e-12,25;DOID:3001,8.97e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002113!1.11e-14!27;UBERON:0003918!1.11e-14!27;UBERON:0005095!1.11e-14!27;UBERON:0007687!1.11e-14!27;UBERON:0006554!1.27e-12!44;UBERON:0001008!2.70e-12!45;UBERON:0000489!3.82e-12!32;UBERON:0004211!1.07e-11!16;UBERON:0001285!1.07e-11!16;UBERON:0007684!1.07e-11!16;UBERON:0003220!1.07e-11!16;UBERON:0004208!1.07e-11!16;UBERON:0009773!3.11e-11!12;UBERON:0001231!3.11e-11!12;UBERON:0004810!3.11e-11!12;UBERON:0006555!5.67e-11!17;UBERON:0005103!5.67e-11!17;UBERON:0000083!5.67e-11!17;UBERON:0009201!5.67e-11!17;UBERON:0004819!5.67e-11!17;UBERON:0006553!5.67e-11!17;UBERON:0003074!5.67e-11!17;UBERON:0003060!5.67e-11!17;UBERON:0001225!2.29e-10!13;UBERON:0008987!2.29e-10!13;UBERON:0000080!2.49e-10!18;UBERON:0002120!2.49e-10!18;UBERON:0004875!2.49e-10!18;UBERON:0005721!2.49e-10!18;UBERON:0005754!2.49e-10!18;UBERON:0007297!2.49e-10!18;UBERON:0004876!3.09e-09!20;UBERON:0003887!9.10e-09!21;UBERON:0001851!2.28e-08!16;UBERON:0003064!4.24e-08!37;UBERON:0000353!7.36e-08!17;UBERON:0000058!5.79e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;3.06e-12;3!UBERON:0007685;3.06e-12;3!UBERON:0004134;3.06e-12;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,3.24e-12,3;UBERON:0007685,3.24e-12,3;UBERON:0004134,3.24e-12,3 | |||
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|short_description=p@chr10:34987997..34988013,- | |short_description=p@chr10:34987997..34988013,- | ||
}} | }} |
Latest revision as of 13:24, 23 July 2015
Short description: | p@chr10:34987997..34988013, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:34987997..34988013, - |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.84e-34 | 1 |
seromucus secreting cell | 5.48e-18 | 2 |
brush border epithelial cell | 3.24e-12 | 3 |
kidney cortex tubule cell | 3.24e-12 | 3 |
epithelial cell of proximal tubule | 3.24e-12 | 3 |
kidney cell | 9.62e-09 | 17 |
kidney epithelial cell | 9.62e-09 | 17 |
epithelial cell of uterus | 8.97e-07 | 6 |
stromal cell of endometrium | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 3.24e-12 | 3 |
region of nephron tubule | 3.24e-12 | 3 |
proximal tubule | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.84e-34 | 1 |
clear cell adenocarcinoma | 9.07e-18 | 2 |
adenocarcinoma | 1.18e-12 | 25 |
female reproductive endometrioid cancer | 8.97e-07 | 6 |