FFCP PHASE1:Hg19::chr1:155224711..155224738,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:155224711..155224738,-
|short_description=p6@FAM189B
|description=CAGE_peak_6_at_FAM189B_5end
|association_with_transcript=12bp_to_,-12bp_to_ENST0000035021...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10712 | |EntrezGene=10712 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1233 | |HGNC=1233 | ||
|TSSclassifier=strong | |||
|UniProt=D6RD59 | |UniProt=D6RD59 | ||
|association_with_transcript=12bp_to_,-12bp_to_ENST00000350210,ENST00000491082_5end | |||
|cluster_id=chr1:155224711..155224738,- | |||
|description=CAGE_peak_6_at_FAM189B_5end | |||
|id=chr1:155224711..155224738,- | |||
|ontology_enrichment_celltype=CL:0000055!1.04e-26!180;CL:0000057!5.67e-21!75;CL:0000183!7.43e-12!59;CL:0000680!2.13e-11!57;CL:0000056!2.13e-11!57;CL:0000355!2.13e-11!57;CL:0000192!3.96e-10!42;CL:0000514!3.96e-10!42;CL:0000187!6.94e-10!54;CL:0000220!2.69e-09!246;CL:0002321!3.43e-09!248;CL:0000393!5.18e-09!60;CL:0000211!5.18e-09!60;CL:0000222!1.14e-08!119;CL:0000144!1.87e-08!625;CL:0000548!1.91e-08!679;CL:0000004!1.91e-08!679;CL:0000255!1.91e-08!679;CL:0000012!4.92e-08!682;CL:0002371!6.35e-08!591;CL:0002620!7.21e-08!23;CL:0002334!1.34e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000057;2.00e-08;73!CL:1000306;4.91e-08;4!CL:0002547;4.91e-08;4!CL:0002334;4.85e-07;12!CL:0002552;4.99e-07;5!CL:0002582;6.34e-07;3!CL:0002559;7.54e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.82e-16,76;CL:0000680,1.52e-07,58;CL:0000056,1.52e-07,58;CL:0000355,1.52e-07,58;CL:1000306,2.41e-07,4;CL:0002547,2.41e-07,4;CL:0002334,2.88e-07,12;CL:0002552,4.06e-07,5;CL:0002582,4.24e-07,3;CL:0000048,5.09e-07,427;CL:0002559,5.30e-07,5;CL:0000192,6.86e-07,43;CL:0000514,6.86e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;6.34e-07;3!DOID:127;6.34e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,3.32e-07,3;DOID:127,3.32e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.41e-17!83;UBERON:0002329!3.41e-17!83;UBERON:0003077!3.41e-17!83;UBERON:0003059!3.41e-17!83;UBERON:0007282!3.41e-17!83;UBERON:0009618!3.41e-17!83;UBERON:0007285!3.41e-17!83;UBERON:0004290!1.59e-13!70;UBERON:0000475!2.01e-13!365;UBERON:0000486!3.39e-13!82;UBERON:0005256!7.89e-13!143;UBERON:0002100!3.20e-11!216;UBERON:0003102!1.63e-10!95;UBERON:0001134!1.32e-09!61;UBERON:0002036!1.32e-09!61;UBERON:0003082!1.32e-09!61;UBERON:0000481!2.94e-09!347;UBERON:0002385!8.05e-09!63;UBERON:0001015!8.05e-09!63;UBERON:0000383!8.05e-09!63;UBERON:0003104!1.36e-08!238;UBERON:0009142!1.36e-08!238;UBERON:0002199!1.50e-08!45;UBERON:0002416!1.50e-08!45;UBERON:0002097!3.20e-07!40;UBERON:0000119!4.29e-07!312;UBERON:0000468!5.76e-07!659;UBERON:0000483!5.78e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;4.91e-08;4!UBERON:0000415;4.91e-08;4!UBERON:0007240;4.91e-08;4!UBERON:0005742;4.91e-08;4!UBERON:0005734;4.91e-08;4!UBERON:0004664;4.91e-08;4!UBERON:0004663;4.91e-08;4!UBERON:0002067;2.47e-07;9!UBERON:0002073;7.54e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.38e-13,78;UBERON:0007524,3.77e-11,73;UBERON:0002329,1.11e-10,71;UBERON:0003059,1.11e-10,71;UBERON:0007282,1.11e-10,71;UBERON:0004290,1.11e-10,71;UBERON:0009618,1.11e-10,71;UBERON:0003077,1.94e-10,72;UBERON:0007285,1.94e-10,72;UBERON:0003102,2.73e-10,99;UBERON:0002199,3.88e-09,46;UBERON:0002416,3.88e-09,46;UBERON:0000486,4.10e-09,83;UBERON:0003104,2.32e-08,160;UBERON:0009142,2.32e-08,160;UBERON:0005256,1.43e-07,122;UBERON:0002067,2.33e-07,9;UBERON:0004016,2.33e-07,9;UBERON:0010083,2.33e-07,9;UBERON:0000415,2.41e-07,4;UBERON:0007240,2.41e-07,4;UBERON:0005742,2.41e-07,4;UBERON:0005734,2.41e-07,4;UBERON:0004664,2.41e-07,4;UBERON:0004663,2.41e-07,4;UBERON:0002097,4.59e-07,41;UBERON:0002073,5.30e-07,5;UBERON:0005086,5.30e-07,5;UBERON:0004573,5.97e-07,33;UBERON:0004571,5.97e-07,33;UBERON:0001637,8.80e-07,42;UBERON:0003509,8.80e-07,42;UBERON:0004572,8.80e-07,42;UBERON:0001134,9.16e-07,62;UBERON:0002036,9.16e-07,62;UBERON:0003082,9.16e-07,62 | |||
|phase1_expression=0.54503513781167,5.56661362116556,0.845726424575827,3.00219895059391,1.34088328328186,0.872338524100369,0,3.15859936713415,0.522371256399677,0.491467873003018,1.39560233594486,0.436882744260345,0,1.48519623552056,0.662794751455832,0,0.602694528023977,0,0.487932798790507,0.861847406537515,1.83600622119828,0.313454721478088,0.572471974262113,1.64249310087461,0.502170558379211,0,0,0,0,0,0,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0.419499436209906,0,0.417989933073621,0,0,0,0.402829317109147,0.760272105718513,0,0.367663080345869,0,0.267899184852239,0,0,0,0.949265659568129,0,0,0,0.436094052142534,1.49091585508596,1.13967460498122,1.05927344650575,2.0078563452417,1.06400514659507,2.24271040056923,0,0,0.622422070799533,0.269421344139376,0.490385709340376,0.908144565869588,0,0.468642863667593,1.24864030732128,2.2818872861778,0.298897361103602,0.704606991862589,1.29498355494505,0.842704840213491,2.65400422631361,0.491337269247072,2.47981874821837,2.37600571456411,1.48360157567134,2.73048408581408,0.718618141816238,0.168336113954066,1.12606667884768,1.6623846929051,1.31693286264251,1.22595118319608,0.45071417671979,0.226864366320042,1.4351170855109,0.427114777637135,0,2.10063767259082,0.206105058476878,0.515281080091258,1.30281799432113,3.54430297706659,1.16924406193438,0.757301322732344,0.276149695926898,0.646584227275248,1.42003837006646,0.604512589365842,0.67824236924195,0.386521706326594,0,0.286804595389004,0,0.132529768321485,0,0,0,0,1.56449532329816,2.57296375277154,1.38134921352481,0.464367928031979,5.0531563716871,0.236613600079688,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0,0.134831308160164,0.196221465125346,0.38474715694639,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0.878002283269004,0,0,0,0,3.11980435583874,0,0.579652024875384,0.352226082707465,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0.567100388969546,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.336393253036082,0,0.36669142910475,0.129271715757778,10.7296933755565,1.690605505112,0,0,2.31486636835928,2.83698264046557,2.39779961114489,1.00084595560703,0,1.64648067356154,0,0.710783897485092,0.791951872933429,0.602878754119172,0,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,0,1.44781306667579,1.84928690295345,1.43248770591916,0,0,0,0,0.76228387266739,0,1.54657762555539,0.670065061337395,0,0,0,0,1.10422342547226,4.00136416847742,0.271265023699736,0.623912584592421,1.07057393278297,0.473107245101804,0.468565659970853,0,0,0,0,0.184369168541703,0.868836144680828,3.13281851940385,1.02943027143257,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0.561320188866147,0.768834895534206,1.53512174720011,0.64341568457443,1.48418066444991,1.69630663182921,1.06537035187876,2.79232330446951,1.55776328755086,2.09178681227927,0,1.20303882181971,0.0920809889358963,0.114814448164607,0,1.04899531967539,0.451199612907412,0.15403067420883,0.784349769176855,1.46139224653261,0,1.13733384070897,0.510281115829547,0,1.54227252690289,0.270946437543853,1.50506932156456,0.254876273045038,0,0,0,0,1.28225062558195,0.328014645699706,0,0,0.0915694648183434,0.247528499761764,1.14853107599234,1.30012049207304,0,0,0.462145851343933,0.614014698904518,0.413509717453592,0.966782203814463,2.0302337147992,0.852266274161009,0,0.165284915360978,0,0,0.10115778085555,0,6.61105928344344,1.3940745403212,0.308033580176089,1.59691809095107,3.47973196830029,0.37064843820784,0.143124886741991,1.48863347743867,0.632758849437452,0.38126038784765,0.511795582622668,0.855877976067841,0.636406495851874,0,0.539617372749944,0.54907405947211,0.589062011728432,1.2130948894399,0,0.842516912477962,1.46290121726877,2.19342140668156,1.05650146756755,0.545999645631943,0.707027159768564,3.39024349860728,0,1.99031692572366,1.75380354101505,2.89387767133344,1.9676842561399,0.202910376962704,0.30982349809975,1.12678241012897,0,0.196498082026242,0,0.354761064070598,0.633322905892992,0,1.51789269506286,0.349934720244983,0,0.670302275535787,0,0,0.43050537267123,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0.28853842595289,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0.422250816255987,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,2.22273980289274,0,0.0927680981618513,0,0,0.174919999992391,0,0.1137934482855,0,0,0,0,0.520874984799877,0,0,0,0,0,0,0.21787692703798,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.176915129006678,0,0,0,0.104421949505455,0.067401132980677,0,0,0.182454789215666,0,1.21390189767046,0,0,0,0.126373159256976,0,0,0,0,0,0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| ||
|short_description=p6@FAM189B | |||
}} | }} |
Latest revision as of 12:02, 17 September 2015
Short description: | p6@FAM189B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FAM189B_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_, -12bp_to_ENST00000350210, ENST00000491082_5end |
EntrezGene: | FAM189B |
HGNC: | 1233 |
UniProt: | D6RD59 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.82e-16 | 76 |
muscle precursor cell | 1.52e-07 | 58 |
myoblast | 1.52e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.52e-07 | 58 |
fibroblast of tunica adventitia of artery | 2.41e-07 | 4 |
fibroblast of the aortic adventitia | 2.41e-07 | 4 |
preadipocyte | 2.88e-07 | 12 |
fibroblast of gingiva | 4.06e-07 | 5 |
visceral preadipocyte | 4.24e-07 | 3 |
multi fate stem cell | 5.09e-07 | 427 |
hair follicle cell | 5.30e-07 | 5 |
smooth muscle cell | 6.86e-07 | 43 |
smooth muscle myoblast | 6.86e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 3.32e-07 | 3 |
leiomyoma | 3.32e-07 | 3 |