FFCP PHASE1:Hg19::chr1:153606825..153606868,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:153606825..153606868,-
|short_description=p3@S100A13
|description=CAGE_peak_3_at_S100A13_5end
|association_with_transcript=4bp_to_ENST00000469931_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6284 | |EntrezGene=6284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10490 | |HGNC=10490 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENST00000469931_5end | |||
|cluster_id=chr1:153606825..153606868,- | |||
|description=CAGE_peak_3_at_S100A13_5end | |||
|id=chr1:153606825..153606868,- | |||
|ontology_enrichment_celltype=CL:0002371!6.61e-35!591;CL:0000144!2.41e-34!625;CL:0000012!9.59e-33!682;CL:0000548!1.85e-30!679;CL:0000004!1.85e-30!679;CL:0000255!1.85e-30!679;CL:0000003!4.40e-30!722;CL:0000048!7.30e-28!430;CL:0000723!7.94e-27!436;CL:0000034!1.49e-26!444;CL:0000063!3.97e-22!578;CL:0000134!2.48e-21!358;CL:0002320!6.21e-21!365;CL:0000219!6.26e-17!390;CL:0000738!1.42e-15!140;CL:0002057!1.38e-14!42;CL:0000988!2.34e-14!182;CL:0002087!4.80e-14!119;CL:0000037!6.04e-14!172;CL:0000566!6.04e-14!172;CL:0002032!2.81e-13!165;CL:0000837!2.81e-13!165;CL:0000860!9.02e-13!45;CL:0000766!1.50e-12!76;CL:0002031!1.90e-12!124;CL:0002009!1.06e-10!65;CL:0000557!1.38e-10!71;CL:0002194!3.34e-10!63;CL:0000576!3.34e-10!63;CL:0000040!3.34e-10!63;CL:0000559!3.34e-10!63;CL:0000222!4.87e-10!119;CL:0000763!1.83e-09!112;CL:0000049!1.83e-09!112;CL:0000839!1.73e-08!70;CL:0002139!3.19e-08!24;CL:0000071!5.47e-07!18;CL:0002546!5.47e-07!18;CL:0002393!6.45e-07!9;CL:0002397!6.45e-07!9;CL:0000115!6.92e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000576;1.86e-09;48!CL:0000860;7.64e-09;33!CL:0002057;7.64e-09;33!CL:0002139;2.52e-08;24!CL:0000766;2.40e-07;69!CL:0000071;5.29e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.06e-28,427;CL:0000723,2.33e-27,433;CL:0000034,4.46e-27,441;CL:0000134,6.25e-22,354;CL:0002320,1.62e-21,361;CL:0000219,1.95e-17,386;CL:0000738,5.32e-17,136;CL:0002087,1.60e-15,115;CL:0000988,1.60e-15,177;CL:0000037,3.93e-15,168;CL:0000860,1.37e-14,42;CL:0002057,1.37e-14,42;CL:0002032,1.86e-14,161;CL:0000837,1.86e-14,161;CL:0000766,2.14e-14,72;CL:0002031,8.59e-14,120;CL:0000473,6.35e-13,48;CL:0000234,6.35e-13,48;CL:0002009,1.56e-12,61;CL:0000557,2.70e-12,67;CL:0002194,5.19e-12,59;CL:0000576,5.19e-12,59;CL:0000040,5.19e-12,59;CL:0000559,5.19e-12,59;CL:0000763,1.19e-10,108;CL:0000049,1.19e-10,108;CL:0000839,5.57e-10,66;CL:0000222,6.37e-10,121;CL:0002139,3.18e-08,24;CL:0000071,5.46e-07,18;CL:0002546,5.46e-07,18;CL:0002393,6.43e-07,9;CL:0002397,6.43e-07,9;CL:0000115,7.90e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002057;1.37e-10;42!CL:0002546;5.29e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!6.69e-20!375;UBERON:0003081!2.80e-14!216;UBERON:0000055!2.31e-11!69;UBERON:0002204!7.67e-11!167;UBERON:0002371!1.53e-10!80;UBERON:0001474!6.44e-10!86;UBERON:0001637!6.67e-10!42;UBERON:0003509!6.67e-10!42;UBERON:0004572!6.67e-10!42;UBERON:0002049!2.54e-09!79;UBERON:0007798!2.54e-09!79;UBERON:0001981!7.05e-09!60;UBERON:0007500!7.05e-09!60;UBERON:0004537!7.05e-09!60;UBERON:0006965!7.05e-09!60;UBERON:0002193!9.74e-09!112;UBERON:0004765!3.24e-08!101;UBERON:0001434!3.24e-08!101;UBERON:0004573!6.81e-08!33;UBERON:0004571!6.81e-08!33;UBERON:0002390!2.10e-07!102;UBERON:0003061!2.10e-07!102;UBERON:0004872!4.13e-07!84;UBERON:0001986!5.47e-07!18;UBERON:0004638!5.47e-07!18;UBERON:0004852!5.47e-07!18;UBERON:0004535!6.49e-07!110;UBERON:0002405!9.60e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.16e-07;42!UBERON:0003509;1.16e-07;42!UBERON:0004572;1.16e-07;42!UBERON:0004573;2.24e-07;33!UBERON:0004571;2.24e-07;33!UBERON:0004638;5.29e-07;18!UBERON:0001986;5.29e-07;18!UBERON:0004852;5.29e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.76e-20,371;UBERON:0003081,1.02e-15,203;UBERON:0002371,4.11e-12,76;UBERON:0000055,5.89e-12,68;UBERON:0000926,6.10e-12,315;UBERON:0004120,6.10e-12,315;UBERON:0006603,6.10e-12,315;UBERON:0002405,7.88e-12,93;UBERON:0001474,2.38e-11,82;UBERON:0002204,2.86e-11,167;UBERON:0001637,6.65e-10,42;UBERON:0003509,6.65e-10,42;UBERON:0004572,6.65e-10,42;UBERON:0004765,7.33e-10,90;UBERON:0002193,7.65e-10,108;UBERON:0002049,8.46e-10,78;UBERON:0007798,8.46e-10,78;UBERON:0007500,2.01e-09,59;UBERON:0001981,2.01e-09,59;UBERON:0004537,2.01e-09,59;UBERON:0006965,2.01e-09,59;UBERON:0001434,8.71e-09,100;UBERON:0002390,1.91e-08,98;UBERON:0003061,1.91e-08,98;UBERON:0004573,6.79e-08,33;UBERON:0004571,6.79e-08,33;UBERON:0004872,1.72e-07,83;UBERON:0004535,3.09e-07,109;UBERON:0004638,5.46e-07,18;UBERON:0001986,5.46e-07,18;UBERON:0004852,5.46e-07,18 | |||
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| ||
|short_description=p3@S100A13 | |||
}} | }} |
Latest revision as of 06:55, 17 September 2015
Short description: | p3@S100A13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_S100A13_5end |
Coexpression cluster: | NA |
Association with transcript: | 4bp_to_ENST00000469931_5end |
EntrezGene: | S100A13 |
HGNC: | 10490 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.76e-20 | 371 |
lateral plate mesoderm | 1.02e-15 | 203 |
bone marrow | 4.11e-12 | 76 |
vessel | 5.89e-12 | 68 |
mesoderm | 6.10e-12 | 315 |
mesoderm-derived structure | 6.10e-12 | 315 |
presumptive mesoderm | 6.10e-12 | 315 |
immune system | 7.88e-12 | 93 |
bone element | 2.38e-11 | 82 |
musculoskeletal system | 2.86e-11 | 167 |
artery | 6.65e-10 | 42 |
arterial blood vessel | 6.65e-10 | 42 |
arterial system | 6.65e-10 | 42 |
skeletal element | 7.33e-10 | 90 |
hemolymphoid system | 7.65e-10 | 108 |
vasculature | 8.46e-10 | 78 |
vascular system | 8.46e-10 | 78 |
epithelial tube open at both ends | 2.01e-09 | 59 |
blood vessel | 2.01e-09 | 59 |
blood vasculature | 2.01e-09 | 59 |
vascular cord | 2.01e-09 | 59 |
skeletal system | 8.71e-09 | 100 |
hematopoietic system | 1.91e-08 | 98 |
blood island | 1.91e-08 | 98 |
systemic artery | 6.79e-08 | 33 |
systemic arterial system | 6.79e-08 | 33 |
splanchnic layer of lateral plate mesoderm | 1.72e-07 | 83 |
cardiovascular system | 3.09e-07 | 109 |
blood vessel endothelium | 5.46e-07 | 18 |
endothelium | 5.46e-07 | 18 |
cardiovascular system endothelium | 5.46e-07 | 18 |