FFCP PHASE1:Hg19::chr12:31397380..31397386,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:31397380..31397386,+ | |||
|coexpression_cluster_id=C60 | |coexpression_cluster_id=C60 | ||
|description=CAGE_peak_at_chr12:31397380..31397386,+ | |description=CAGE_peak_at_chr12:31397380..31397386,+ | ||
|id=chr12:31397380..31397386,+ | |id=chr12:31397380..31397386,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:4362;6.78e-08;5 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0001723;9.77e-45;3!UBERON:0001033;9.77e-45;3!UBERON:0005795;5.97e-34;1!UBERON:0000341;9.86e-18;2!UBERON:0001043;1.96e-12;3!UBERON:0002050;6.78e-08;5!UBERON:0005423;6.78e-08;5!UBERON:0000002;8.72e-07;6!UBERON:0000974;8.72e-07;6!UBERON:0001560;8.72e-07;6!UBERON:0000020;9.67e-07;23 | |ontology_enrichment_development_v019=UBERON:0009143;2.18e-34;1!UBERON:0008814;5.96e-18;2!UBERON:0010056;5.96e-18;2 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;6.78e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,7.01e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0001723!3.01e-20!3;UBERON:0001033!3.01e-20!3;UBERON:0010056!3.01e-20!3;UBERON:0002372!1.78e-15!1;UBERON:0001961!1.78e-15!1;UBERON:0001744!1.78e-15!1;UBERON:0001735!1.78e-15!1;UBERON:0000997!2.38e-15!1;UBERON:0005056!2.38e-15!1;UBERON:0001042!1.54e-13!10;UBERON:0009145!1.54e-13!10;UBERON:0006562!2.30e-12!11;UBERON:0000166!3.84e-11!21;UBERON:0000002!1.65e-10!6;UBERON:0001560!1.65e-10!6;UBERON:0000161!4.12e-10!35;UBERON:0000341!1.39e-08!2;UBERON:0000165!2.03e-08!28;UBERON:0000930!2.03e-08!28;UBERON:0003127!2.67e-08!2;UBERON:0001255!3.08e-08!2;UBERON:0001556!3.08e-08!2;UBERON:0000078!9.02e-08!18;UBERON:0001557!2.18e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;9.77e-45;3!UBERON:0001033;9.77e-45;3!UBERON:0005795;5.97e-34;1!UBERON:0000341;9.86e-18;2!UBERON:0001043;1.96e-12;3!UBERON:0002050;6.78e-08;5!UBERON:0005423;6.78e-08;5!UBERON:0000002;8.72e-07;6!UBERON:0000974;8.72e-07;6!UBERON:0001560;8.72e-07;6!UBERON:0000020;9.67e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.22e-44,3;UBERON:0001033,1.22e-44,3;UBERON:0010056,1.22e-44,3;UBERON:0000341,7.67e-18,2;UBERON:0001042,3.25e-14,10;UBERON:0009145,3.25e-14,10;UBERON:0006562,5.10e-13,11;UBERON:0001043,2.07e-12,3;UBERON:0009143,2.07e-12,3;UBERON:0008814,2.42e-08,18;UBERON:0001557,5.94e-08,19;UBERON:0000166,5.40e-07,22;UBERON:0005795,5.74e-07,22;UBERON:0000002,8.97e-07,6;UBERON:0001560,8.97e-07,6 | |||
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|short_description=p@chr12:31397380..31397386,+ | |short_description=p@chr12:31397380..31397386,+ | ||
}} | }} |
Latest revision as of 08:05, 24 July 2015
Short description: | p@chr12:31397380..31397386, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:31397380..31397386, + |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 1.22e-44 | 3 |
gustatory system | 1.22e-44 | 3 |
future tongue | 1.22e-44 | 3 |
throat | 7.67e-18 | 2 |
chordate pharynx | 3.25e-14 | 10 |
pharyngeal region of foregut | 3.25e-14 | 10 |
pharynx | 5.10e-13 | 11 |
esophagus | 2.07e-12 | 3 |
esophageal region | 2.07e-12 | 3 |
pharyngeal arch system | 2.42e-08 | 18 |
upper respiratory tract | 5.94e-08 | 19 |
oral opening | 5.40e-07 | 22 |
embryonic uterus | 5.74e-07 | 22 |
uterine cervix | 8.97e-07 | 6 |
neck of organ | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 7.01e-08 | 5 |