FFCP PHASE1:Hg19::chr16:87894278..87894291,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:87894278..87894291,- | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_at_chr16:87894278..87894291,- | |description=CAGE_peak_at_chr16:87894278..87894291,- | ||
|id=chr16:87894278..87894291,- | |id=chr16:87894278..87894291,- | ||
|ontology_enrichment_celltype=CL:0000764;9.13e-22;2!CL:0000558;9.13e-22;2!CL:0000319;1.52e-11;1!CL:0002566;3.28e-11;1!CL:0000182;5.83e-08;12 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000764;9.13e-22;2!CL:0000558;9.13e-22;2!CL:0000319;1.52e-11;1!CL:0002566;3.28e-11;1!CL:0000182;5.83e-08;12 | ||
|ontology_enrichment_disease=DOID:3030;1.52e-11;1 | |ontology_enrichment_celltype_v019_2=CL:0000764,9.15e-22,2;CL:0000765,9.15e-22,2;CL:0000050,9.15e-22,2;CL:0000038,9.15e-22,2;CL:0000558,9.15e-22,2;CL:0000547,9.15e-22,2;CL:0000549,9.15e-22,2;CL:0000550,9.15e-22,2;CL:0000552,9.15e-22,2;CL:0000319,1.45e-11,1;CL:0002566,2.68e-11,1;CL:0000182,6.42e-08,12 | ||
|ontology_enrichment_uberon=UBERON:0002368;3.52e-10;33!UBERON:0002107;1.58e-08;19!UBERON:0006925;1.58e-08;19 | |ontology_enrichment_development_v019=UBERON:0004161;1.42e-14;11!UBERON:0009497;2.26e-12;13!UBERON:0003104;7.80e-11;31 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;1.52e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.45e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000966!1.63e-07!5;UBERON:0005388!1.63e-07!5;UBERON:0001802!1.63e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002368;3.52e-10;33!UBERON:0002107;1.58e-08;19!UBERON:0006925;1.58e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002368,9.60e-10,35;UBERON:0002107,1.71e-08,19;UBERON:0006925,1.71e-08,19;UBERON:0008836,1.71e-08,19;UBERON:0000949,1.75e-07,45;UBERON:0008835,2.34e-07,22;UBERON:0003894,2.34e-07,22;UBERON:0009854,4.82e-07,23 | |||
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| ||
|short_description=p@chr16:87894278..87894291,- | |short_description=p@chr16:87894278..87894291,- | ||
}} | }} |
Latest revision as of 13:14, 25 July 2015
Short description: | p@chr16:87894278..87894291, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:87894278..87894291, - |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 9.15e-22 | 2 |
erythroblast | 9.15e-22 | 2 |
megakaryocyte-erythroid progenitor cell | 9.15e-22 | 2 |
erythroid progenitor cell | 9.15e-22 | 2 |
reticulocyte | 9.15e-22 | 2 |
proerythroblast | 9.15e-22 | 2 |
basophilic erythroblast | 9.15e-22 | 2 |
polychromatophilic erythroblast | 9.15e-22 | 2 |
orthochromatic erythroblast | 9.15e-22 | 2 |
mucus secreting cell | 1.45e-11 | 1 |
dark melanocyte | 2.68e-11 | 1 |
hepatocyte | 6.42e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
endocrine gland | 9.60e-10 | 35 |
liver | 1.71e-08 | 19 |
digestive gland | 1.71e-08 | 19 |
liver bud | 1.71e-08 | 19 |
endocrine system | 1.75e-07 | 45 |
hepatic diverticulum | 2.34e-07 | 22 |
liver primordium | 2.34e-07 | 22 |
digestive tract diverticulum | 4.82e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.45e-11 | 1 |