FFCP PHASE1:Hg19::chr18:65175930..65175941,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:65175930..65175941,+ | |||
|coexpression_cluster_id=C63 | |coexpression_cluster_id=C63 | ||
|description=CAGE_peak_at_chr18:65175930..65175941,+ | |description=CAGE_peak_at_chr18:65175930..65175941,+ | ||
|id=chr18:65175930..65175941,+ | |id=chr18:65175930..65175941,+ | ||
|ontology_enrichment_celltype=CL:0002591;3.99e-50;1!CL:0002615;9.45e-18;3 | |ontology_enrichment_celltype=CL:0000057!6.40e-09!75;CL:0002620!1.81e-08!23 | ||
| | |ontology_enrichment_celltype_v019=CL:0002591;3.99e-50;1!CL:0002615;9.45e-18;3 | ||
|ontology_enrichment_disease=DOID:3307;7.14e-26;2!DOID:3095;4.33e-10;22!DOID:2994;4.33e-10;22 | |ontology_enrichment_celltype_v019_2=CL:0002591,3.99e-50,1;CL:0002615,1.12e-17,3 | ||
|ontology_enrichment_uberon=UBERON:0000078;7.14e-26;2!UBERON:0002012;7.14e-26;2!UBERON:0008886;7.14e-26;2!UBERON:0002346;8.81e-14;4!UBERON:0000923;8.81e-14;4!UBERON:0010316;8.81e-14;4!UBERON:0005291;8.81e-14;4!UBERON:0002050;2.66e-11;5!UBERON:0005423;2.66e-11;5!UBERON:0003688;1.44e-09;6!UBERON:0002358;1.44e-09;6!UBERON:0003684;1.44e-09;6!UBERON:0001178;1.44e-09;6!UBERON:0004457;8.37e-07;9!UBERON:0000042;8.37e-07;9 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;7.14e-26;2!DOID:3095;4.33e-10;22!DOID:2994;4.33e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,5.56e-26,2;DOID:3095,4.14e-10,22;DOID:2994,4.14e-10,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;7.14e-26;2!UBERON:0002012;7.14e-26;2!UBERON:0008886;7.14e-26;2!UBERON:0002346;8.81e-14;4!UBERON:0000923;8.81e-14;4!UBERON:0010316;8.81e-14;4!UBERON:0005291;8.81e-14;4!UBERON:0002050;2.66e-11;5!UBERON:0005423;2.66e-11;5!UBERON:0003688;1.44e-09;6!UBERON:0002358;1.44e-09;6!UBERON:0003684;1.44e-09;6!UBERON:0001178;1.44e-09;6!UBERON:0004457;8.37e-07;9!UBERON:0000042;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,7.14e-26,2;UBERON:0007497,7.14e-26,2;UBERON:0003643,7.14e-26,2;UBERON:0003504,7.14e-26,2;UBERON:0003469,7.14e-26,2;UBERON:0003496,7.14e-26,2;UBERON:0002012,7.14e-26,2;UBERON:0008886,7.14e-26,2;UBERON:0007303,7.14e-26,2;UBERON:0002061,7.14e-26,2;UBERON:0005432,7.14e-26,2;UBERON:0004363,7.14e-26,2;UBERON:0004145,9.46e-18,3;UBERON:0003498,3.26e-11,5;UBERON:0005985,3.26e-11,5;UBERON:0010188,1.44e-09,6;UBERON:0002539,1.44e-09,6;UBERON:0003351,1.44e-09,6;UBERON:0008816,1.44e-09,6;UBERON:0003688,1.57e-09,6;UBERON:0002358,1.57e-09,6;UBERON:0003684,1.57e-09,6;UBERON:0001178,1.57e-09,6;UBERON:0000485,8.37e-07,9 | |||
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| ||
|short_description=p@chr18:65175930..65175941,+ | |short_description=p@chr18:65175930..65175941,+ | ||
}} | }} |
Latest revision as of 01:57, 26 July 2015
Short description: | p@chr18:65175930..65175941, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:65175930..65175941, + |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 3.99e-50 | 1 |
adipocyte of omentum tissue | 1.12e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 7.14e-26 | 2 |
developing epithelial placode | 7.14e-26 | 2 |
respiratory system arterial blood vessel | 7.14e-26 | 2 |
respiratory system blood vessel | 7.14e-26 | 2 |
respiratory system artery | 7.14e-26 | 2 |
head blood vessel | 7.14e-26 | 2 |
pulmonary artery | 7.14e-26 | 2 |
pulmonary vascular system | 7.14e-26 | 2 |
pharyngeal vasculature | 7.14e-26 | 2 |
truncus arteriosus | 7.14e-26 | 2 |
aortic sac | 7.14e-26 | 2 |
pharyngeal arch artery | 7.14e-26 | 2 |
outflow tract | 9.46e-18 | 3 |
heart blood vessel | 3.26e-11 | 5 |
coronary vessel | 3.26e-11 | 5 |
protuberance | 1.44e-09 | 6 |
pharyngeal arch | 1.44e-09 | 6 |
pharyngeal epithelium | 1.44e-09 | 6 |
embryonic head | 1.44e-09 | 6 |
omentum | 1.57e-09 | 6 |
peritoneum | 1.57e-09 | 6 |
abdominal cavity | 1.57e-09 | 6 |
visceral peritoneum | 1.57e-09 | 6 |
simple columnar epithelium | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
teratoma | 5.56e-26 | 2 |
germ cell and embryonal cancer | 4.14e-10 | 22 |
germ cell cancer | 4.14e-10 | 22 |