FFCP PHASE1:Hg19::chr6:30652497..30652508,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=170954 | |EntrezGene=170954 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29413 | |HGNC=29413 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=12bp_to_BC047721_5end | |association_with_transcript=12bp_to_BC047721_5end | ||
|cluster_id=chr6:30652497..30652508,- | |||
|coexpression_cluster_id=C4589 | |coexpression_cluster_id=C4589 | ||
|description=CAGE_peak_13_at_PPP1R18_5end | |description=CAGE_peak_13_at_PPP1R18_5end | ||
|id=chr6:30652497..30652508,- | |id=chr6:30652497..30652508,- | ||
|ontology_enrichment_celltype=CL:0000115;3.35e-14;36!CL:0000084;2.01e-12;25!CL:0000763;2.61e-12;100!CL:0002139;6.81e-12;24!CL:0000766;2.24e-11;69!CL:0000625;2.58e-11;11!CL:0000791;3.34e-11;18!CL:0000789;3.34e-11;18!CL:0002419;3.34e-11;18!CL:0000473;4.80e-11;39!CL:0000234;4.80e-11;39!CL:0000071;1.01e-10;18!CL:0000576;1.45e-10;48!CL:0000542;1.93e-10;53!CL:0000738;5.64e-10;136!CL:0000094;6.34e-10;8!CL:0000860;7.63e-10;33!CL:0002057;7.63e-10;33!CL:0002087;8.04e-10;104!CL:0000988;3.88e-09;177!CL:0000081;7.70e-08;11!CL:0002078;3.20e-07;45 | |ontology_enrichment_celltype=CL:0000037!3.21e-49!172;CL:0000566!3.21e-49!172;CL:0000988!3.31e-49!182;CL:0002032!1.48e-45!165;CL:0000837!1.48e-45!165;CL:0000738!5.87e-40!140;CL:0002087!4.03e-33!119;CL:0002031!1.26e-30!124;CL:0000763!1.24e-26!112;CL:0000049!1.24e-26!112;CL:0000766!1.12e-20!76;CL:0000542!5.26e-17!53;CL:0000051!5.26e-17!53;CL:0000838!6.82e-17!52;CL:0000134!9.03e-16!358;CL:0000048!2.02e-15!430;CL:0000557!3.07e-15!71;CL:0000839!3.39e-15!70;CL:0000723!1.01e-14!436;CL:0002320!1.12e-14!365;CL:0002194!1.44e-14!63;CL:0000576!1.44e-14!63;CL:0000040!1.44e-14!63;CL:0000559!1.44e-14!63;CL:0000034!3.06e-14!444;CL:0002009!2.68e-13!65;CL:0002057!1.99e-12!42;CL:0000084!1.85e-11!25;CL:0000827!1.85e-11!25;CL:0000115!5.99e-11!35;CL:0000219!1.21e-10!390;CL:0000860!1.32e-10!45;CL:0000791!7.07e-10!18;CL:0000789!7.07e-10!18;CL:0002420!7.07e-10!18;CL:0002419!7.07e-10!18;CL:0000790!7.07e-10!18;CL:0002139!1.65e-08!24;CL:0002371!6.32e-08!591;CL:0002078!9.35e-08!44;CL:0000625!9.73e-08!11;CL:0000071!1.09e-07!18;CL:0002546!1.09e-07!18;CL:0000094!8.32e-07!8 | ||
| | |ontology_enrichment_celltype_v019=CL:0000115;3.35e-14;36!CL:0000084;2.01e-12;25!CL:0000763;2.61e-12;100!CL:0002139;6.81e-12;24!CL:0000766;2.24e-11;69!CL:0000625;2.58e-11;11!CL:0000791;3.34e-11;18!CL:0000789;3.34e-11;18!CL:0002419;3.34e-11;18!CL:0000473;4.80e-11;39!CL:0000234;4.80e-11;39!CL:0000071;1.01e-10;18!CL:0000576;1.45e-10;48!CL:0000542;1.93e-10;53!CL:0000738;5.64e-10;136!CL:0000094;6.34e-10;8!CL:0000860;7.63e-10;33!CL:0002057;7.63e-10;33!CL:0002087;8.04e-10;104!CL:0000988;3.88e-09;177!CL:0000081;7.70e-08;11!CL:0002078;3.20e-07;45 | ||
|ontology_enrichment_disease=DOID:8692;5.07e-07;31 | |ontology_enrichment_celltype_v019_2=CL:0000037,9.34e-57,168;CL:0000988,1.05e-54,177;CL:0002032,1.93e-51,161;CL:0000837,1.93e-51,161;CL:0000738,4.19e-46,136;CL:0002087,7.71e-38,115;CL:0002031,1.11e-35,120;CL:0000763,4.85e-33,108;CL:0000049,4.85e-33,108;CL:0000766,5.90e-28,72;CL:0000557,1.86e-20,67;CL:0000839,1.07e-19,66;CL:0002194,3.36e-19,59;CL:0000576,3.36e-19,59;CL:0000040,3.36e-19,59;CL:0000559,3.36e-19,59;CL:0002009,4.17e-18,61;CL:0000473,1.87e-17,48;CL:0000234,1.87e-17,48;CL:0000838,1.53e-16,52;CL:0000542,5.39e-16,53;CL:0000051,5.39e-16,53;CL:0000115,1.62e-15,36;CL:0000860,8.73e-15,42;CL:0002057,8.73e-15,42;CL:0000134,4.97e-14,354;CL:0002320,4.50e-13,361;CL:0000084,2.21e-12,25;CL:0000827,2.21e-12,25;CL:0000048,4.42e-12,427;CL:0002139,6.35e-12,24;CL:0000625,1.70e-11,11;CL:0000034,2.12e-11,441;CL:0000723,2.18e-11,433;CL:0000791,3.15e-11,18;CL:0000789,3.15e-11,18;CL:0002420,3.15e-11,18;CL:0002419,3.15e-11,18;CL:0000790,3.15e-11,18;CL:0000071,6.94e-11,18;CL:0002546,6.94e-11,18;CL:0002078,1.50e-10,45;CL:0000219,1.77e-10,386;CL:0000094,5.27e-10,8;CL:0000081,7.84e-08,11;CL:0000213,5.79e-07,58;CL:0000215,5.79e-07,58 | ||
|ontology_enrichment_uberon=UBERON:0004638;1.01e-10;18!UBERON:0001986;1.01e-10;18!UBERON:0004852;1.01e-10;18!UBERON:0000178;4.53e-10;15!UBERON:0000179;4.53e-10;15!UBERON:0000463;4.53e-10;15!UBERON:0000487;6.79e-08;22!UBERON:0002390;3.36e-07;32!UBERON:0002193;7.06e-07;42 | |ontology_enrichment_development_v019=CL:0000790;3.34e-11;18!CL:0002057;7.95e-11;42!CL:0002546;1.01e-10;18!CL:0000051;1.93e-10;53!CL:0000049;5.77e-10;108 | ||
|ontology_enrichment_disease=DOID:1240!2.63e-10!39;DOID:2531!5.80e-10!51;DOID:0060083!5.80e-10!51;DOID:8692!3.45e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.07e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.12e-08,39;DOID:2531,2.01e-07,51;DOID:0060083,2.01e-07,51;DOID:8692,2.21e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002193!6.10e-23!112;UBERON:0002390!4.51e-22!102;UBERON:0003061!4.51e-22!102;UBERON:0003081!5.99e-21!216;UBERON:0002384!1.80e-13!375;UBERON:0002405!1.99e-13!115;UBERON:0002371!6.57e-13!80;UBERON:0001474!9.61e-11!86;UBERON:0004535!1.60e-09!110;UBERON:0001009!9.04e-09!113;UBERON:0001981!4.23e-08!60;UBERON:0007500!4.23e-08!60;UBERON:0004537!4.23e-08!60;UBERON:0006965!4.23e-08!60;UBERON:0000178!4.26e-08!15;UBERON:0000179!4.26e-08!15;UBERON:0000463!4.26e-08!15;UBERON:0004765!5.82e-08!101;UBERON:0001434!5.82e-08!101;UBERON:0000055!8.53e-08!69;UBERON:0001986!1.09e-07!18;UBERON:0004638!1.09e-07!18;UBERON:0004852!1.09e-07!18;UBERON:0002049!6.14e-07!79;UBERON:0007798!6.14e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.01e-10;18!UBERON:0001986;1.01e-10;18!UBERON:0004852;1.01e-10;18!UBERON:0000178;4.53e-10;15!UBERON:0000179;4.53e-10;15!UBERON:0000463;4.53e-10;15!UBERON:0000487;6.79e-08;22!UBERON:0002390;3.36e-07;32!UBERON:0002193;7.06e-07;42 | |||
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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0,0,0.730310090387373,1.46379839637152,0,0,0,0,0,0.125542639594803,0.764134057479513,0.492603536699674,0.393553906568396,6.29382842958246,3.83829398097213,3.71558695958582,1.83884244895785,0.30120591877825,0.739508020333575,2.40148321798935,0.568676929949686,4.69760702935756,3.87796785972314,2.4065333696417,1.95309783644267,3.58264758783879,1.29557466407592,3.09090681161024,2.61716829803216,1.13362783106643,2.18325655069035,2.09186133215116,1.6446715520873,1.54853185447552,3.45230870786581,1.7931249457037,0.945928919554341,2.41321976515633,0.645484683583826,1.35426486594342,2.25890807451126,1.63743690034707,1.12361742222542,1.53041946185451,0.320929027076094,0.639337125799041,2.63881040149373,1.99463657621632,1.27867425159808,2.90209238628584,0,1.86846674698672,2.26123798731069,3.12889751052121,0.217188844705117,3.63239701580021,0.368277635987565,1.26584954976354,1.05627643155971,1.4882300997553,2.09658645508376,2.02191536063691,1.80212271409808,1.76798145366788,1.42506371870624,1.39241674039363,0.547992461293902,1.75996244461323,6.00752472388345,1.77901850772711,2.13365111283254,2.40237592221607,1.72425731986345,0.661044872784862,6.67837628174755,2.27685187643779,0.587237189370939,1.14681968437569,2.64342657158052,0.560508562981536,2.37045676297569,0.983548850569165,0.786021525498329,2.05601498999509,2.34061093546949,0.977766799900771,2.8406868344084,0,7.01885878376594,4.71369451959739,7.75368631042674,3.24964636518019,4.61128751012431,4.42201781703586,4.60426132890293,3.03985019564433,1.73881851441031,2.07601188426885,1.33770414044857,0,2.94604291013672,3.44898444241729,4.46715679127419,2.02415753615602,5.41561204350964,3.90650072313851,6.65316431113862,3.16207750063323,2.8157054453972,7.49584359314075,5.44587679701239,13.1380479507367,2.62088766192152,3.7441627409691,1.44824403882799,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.392937226493138,0.364295288292542,0.741568885568859,5.8418530857843,2.78607579678828,2.52620124985844,2.14641561874808,2.28797964312051,1.48583000531826,1.78886166630035,0.860234595106124,3.12426451446835,1.13061588384802,3.77549492588915,4.40188867104108,3.76190939766259,2.06733407335463,0,3.3472061276467,1.61131726843659,0,2.92874469057803,1.47065232138347,2.43042584364528,2.14319347881791,2.2452937262617,2.13961812918312,4.5994991239765,4.74632829784064,2.93122790288652,13.1780417436063,3.87780264148325,0,0,1.13967460498122,0.132409180813219,0,0.709336764396714,0,3.20246987189115,1.72667283892012,0,0.538842688278752,0.653847612453835,0,0,0,0.312160076830321,0,0.896692083310806,0.352303495931295,0.161872944368132,0,0.204154171254893,0.245668634623536,0.206651562351531,0,0,0,0,0.336672227908132,0.250237039743928,0.277064115484183,0,0.30648779579902,0.300476117813194,1.13432183160021,0.179389635688862,0.213557388818567,0,0.300091096084402,0.309157587715317,0.257640540045629,0,0.168776332241266,0.389748020644795,0.252433774244115,0,0.161646056818812,0.355009592516614,0.503760491138201,1.01736355386293,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,2.76269842704961,0,0,0,0,0,0.110293972732394,0,0,0,0,0,2.21446636387394,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,1.32438929824395,0,0.514703430895577,0.329250856225877,0,0.201057944823262,0.277765335475589,0.325808305310325,0,1.44331342025273,0.115930404975077,0.469634776943287,2.02113026865503,2.77791307545966,0.570762456703795,0,0,2.95460407304877,2.80805118167085,2.37809859661965,0,0.335964256397719,0,0.268675568108545,0,0,1.97065295158377,5.72314821085969,0.621984346622316,1.00883967391873,1.38866676769018,0.063497894292169,0,1.17217447210047,0,0.411309970813294,0.300343057843917,0,0.224262168690721,0,0.4400297149257,0.129271715757778,3.57656445851882,0.845302752556,0.26593811658487,0,0,0,0.532844358032199,0.285955987316295,0,0,0.325736184293735,0.355391948742546,0.791951872933429,0.301439377059586,1.74306691720059,0.499864955910285,2.43247561282381,0.502257091432126,2.10833939483032,1.19812427745791,0,0,0.579125226670317,0,1.07436577943937,2.24170287987055,4.72873824484625,3.88129634747131,3.85029108839245,0,0,0,0,0,13.4821264310493,23.932916736322,12.8468809165171,0,0,0.271265023699736,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.347534457872331,0,0.343143423810856,3.3082884179662,2.5885704098234,3.09509917629989,0,0,0,0.248107807818777,0,1.12264037773229,0.128139149255701,0,0.321707842287215,0,0.771048469013278,0,0.657017248110473,1.03850885836724,0.464841513839837,0,0.200506470303285,0.0920809889358963,0.229628896329213,0.364182336013434,0,1.80479845162965,0.0770153371044148,0.784349769176855,0,0,4.54933536283586,2.38131187387122,1.0795795805107,6.16909010761157,0.270946437543853,1.00337954770971,0,0,0.895499018888713,0.219259876645935,0,0,0,0,0.9273691048295,0.0915694648183434,0,2.29706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| ||
|short_description=p13@PPP1R18 | |short_description=p13@PPP1R18 | ||
}} | }} |
Latest revision as of 17:36, 17 September 2015
Short description: | p13@PPP1R18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PPP1R18_5end |
Coexpression cluster: | C4589_Neutrophils_Eosinophils_acute_CD8_Whole_thymus_CD4 |
Association with transcript: | 12bp_to_BC047721_5end |
EntrezGene: | PPP1R18 |
HGNC: | 29413 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.17e-31 | 108 |
hematopoietic system | 2.38e-29 | 98 |
blood island | 2.38e-29 | 98 |
lateral plate mesoderm | 2.17e-27 | 203 |
immune system | 4.49e-23 | 93 |
bone marrow | 2.33e-17 | 76 |
bone element | 5.81e-15 | 82 |
skeletal element | 2.54e-12 | 90 |
connective tissue | 8.65e-12 | 371 |
blood vessel endothelium | 6.94e-11 | 18 |
endothelium | 6.94e-11 | 18 |
cardiovascular system endothelium | 6.94e-11 | 18 |
blood | 6.16e-10 | 15 |
haemolymphatic fluid | 6.16e-10 | 15 |
organism substance | 6.16e-10 | 15 |
skeletal system | 1.05e-09 | 100 |
cardiovascular system | 1.38e-08 | 109 |
mesoderm | 1.43e-08 | 315 |
mesoderm-derived structure | 1.43e-08 | 315 |
presumptive mesoderm | 1.43e-08 | 315 |
simple squamous epithelium | 5.08e-08 | 22 |
circulatory system | 5.24e-08 | 112 |
vessel | 9.13e-08 | 68 |
epithelial tube open at both ends | 2.55e-07 | 59 |
blood vessel | 2.55e-07 | 59 |
blood vasculature | 2.55e-07 | 59 |
vascular cord | 2.55e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.12e-08 | 39 |
hematologic cancer | 2.01e-07 | 51 |
immune system cancer | 2.01e-07 | 51 |
myeloid leukemia | 2.21e-07 | 31 |