FFCP PHASE1:Hg19::chr15:45940864..45940902,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:45940864..45940902,+ | |||
|coexpression_cluster_id=C1740 | |coexpression_cluster_id=C1740 | ||
|description=CAGE_peak_at_chr15:45940864..45940902,+ | |description=CAGE_peak_at_chr15:45940864..45940902,+ | ||
|id=chr15:45940864..45940902,+ | |id=chr15:45940864..45940902,+ | ||
|ontology_enrichment_celltype=CL:0002368;1.26e-45;13!CL:0002202;6.51e-30;9!CL:0002632;6.51e-30;9!CL:0002076;3.06e-26;42!CL:0002621;2.17e-24;3!CL:0000307;1.04e-23;3!CL:0002328;4.00e-23;3!CL:0002327;1.04e-18;4!CL:0000312;1.75e-14;5!CL:0000362;4.84e-14;9!CL:0002159;7.34e-14;14!CL:0000240;3.67e-12;6!CL:0000311;3.67e-12;6!CL:0000079;3.67e-12;6!CL:0000237;3.67e-12;6!CL:0002252;7.26e-09;1!CL:0002077;1.94e-07;34 | |ontology_enrichment_celltype=CL:0002076!1.05e-21!43;CL:0000066!2.98e-20!254;CL:0002368!2.00e-19!13;CL:0000223!3.03e-14!59;CL:0002159!1.39e-12!13;CL:0002327!7.40e-12!4;CL:0002202!7.85e-11!9;CL:0002632!7.85e-11!9;CL:0002621!1.68e-09!3;CL:0000068!2.53e-09!3;CL:0000069!2.53e-09!3;CL:0000307!2.53e-09!3;CL:0000377!2.53e-09!3;CL:0002328!4.57e-09!3;CL:0002166!5.09e-09!3;CL:0002251!2.33e-08!21;CL:0000240!1.18e-07!6;CL:0000311!1.18e-07!6;CL:0000079!1.18e-07!6;CL:0000237!1.18e-07!6;CL:0000036!1.18e-07!6;CL:0000357!1.18e-07!6;CL:0000114!1.18e-07!6 | ||
| | |ontology_enrichment_celltype_v019=CL:0002368;1.26e-45;13!CL:0002202;6.51e-30;9!CL:0002632;6.51e-30;9!CL:0002076;3.06e-26;42!CL:0002621;2.17e-24;3!CL:0000307;1.04e-23;3!CL:0002328;4.00e-23;3!CL:0002327;1.04e-18;4!CL:0000312;1.75e-14;5!CL:0000362;4.84e-14;9!CL:0002159;7.34e-14;14!CL:0000240;3.67e-12;6!CL:0000311;3.67e-12;6!CL:0000079;3.67e-12;6!CL:0000237;3.67e-12;6!CL:0002252;7.26e-09;1!CL:0002077;1.94e-07;34 | ||
|ontology_enrichment_disease=DOID:3111;3.58e-09;1!DOID:3603;3.58e-09;1 | |ontology_enrichment_celltype_v019_2=CL:0002368,8.08e-46,13;CL:0002076,4.54e-33,42;CL:0002202,5.75e-30,9;CL:0002632,5.75e-30,9;CL:0002621,2.44e-24,3;CL:0000068,7.91e-24,3;CL:0000069,7.91e-24,3;CL:0000307,7.91e-24,3;CL:0000377,7.91e-24,3;CL:0000223,2.93e-23,58;CL:0002328,4.33e-23,3;CL:0002327,1.02e-18,4;CL:0000066,1.21e-16,253;CL:0000312,2.10e-14,5;CL:0000362,5.74e-14,9;CL:0002159,8.30e-14,14;CL:0000240,4.27e-12,6;CL:0000311,4.27e-12,6;CL:0000079,4.27e-12,6;CL:0000237,4.27e-12,6;CL:0000036,4.27e-12,6;CL:0000357,4.27e-12,6;CL:0000114,4.27e-12,6;CL:0002252,9.17e-09,1;CL:0002321,1.36e-08,250;CL:0002077,9.38e-08,34 | ||
|ontology_enrichment_uberon=UBERON:0001949;2.17e-24;3!UBERON:0004815;4.00e-23;3!UBERON:0002031;4.00e-23;3!UBERON:0001911;1.04e-18;4!UBERON:0007196;8.52e-18;15!UBERON:0001558;8.52e-18;15!UBERON:0004807;2.44e-16;22!UBERON:0002185;3.99e-14;5!UBERON:0005178;1.04e-12;34!UBERON:0002224;1.04e-12;34!UBERON:0005181;4.59e-12;35!UBERON:0000065;4.73e-12;44!UBERON:0010371;2.17e-11;31!UBERON:0003929;8.89e-11;7!UBERON:0003126;1.71e-10;7!UBERON:0001005;1.71e-10;7!UBERON:0000485;3.02e-10;7!UBERON:0003350;1.72e-09;8!UBERON:0001828;1.72e-09;8!UBERON:0005911;2.31e-09;36!UBERON:0000072;3.27e-09;37!UBERON:0001003;1.74e-08;15!UBERON:0007376;1.74e-08;15 | |ontology_enrichment_development_v019=CL:0000377;1.04e-23;3!CL:0000223;1.95e-13;58!CL:0000357;3.67e-12;6!CL:0000114;3.67e-12;6 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;3.58e-09;1!DOID:3603;3.58e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,3.05e-09,1;DOID:3603,3.05e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.61e-15!169;UBERON:0000925!1.61e-15!169;UBERON:0006595!1.61e-15!169;UBERON:0001911!7.40e-12!4;UBERON:0005333!7.40e-12!4;UBERON:0008425!7.40e-12!4;UBERON:0005311!7.40e-12!4;UBERON:0001007!1.32e-11!155;UBERON:0001555!1.32e-11!155;UBERON:0007026!1.32e-11!155;UBERON:0005153!1.07e-10!37;UBERON:0001949!1.68e-09!3;UBERON:0005911!1.81e-09!82;UBERON:0001004!1.86e-09!72;UBERON:0004815!4.57e-09!3;UBERON:0002031!4.57e-09!3;UBERON:0002294!6.20e-09!7;UBERON:0001173!6.20e-09!7;UBERON:0004912!6.20e-09!7;UBERON:0007196!8.46e-09!14;UBERON:0001558!8.46e-09!14;UBERON:0004921!9.40e-09!129;UBERON:0004185!9.40e-09!129;UBERON:0005178!1.53e-08!34;UBERON:0002224!1.53e-08!34;UBERON:0005181!3.20e-08!35;UBERON:0005157!4.99e-08!51;UBERON:0000065!1.38e-07!53;UBERON:0002185!7.16e-07!4;UBERON:0001708!7.74e-07!4;UBERON:0001704!7.74e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.17e-24;3!UBERON:0004815;4.00e-23;3!UBERON:0002031;4.00e-23;3!UBERON:0001911;1.04e-18;4!UBERON:0007196;8.52e-18;15!UBERON:0001558;8.52e-18;15!UBERON:0004807;2.44e-16;22!UBERON:0002185;3.99e-14;5!UBERON:0005178;1.04e-12;34!UBERON:0002224;1.04e-12;34!UBERON:0005181;4.59e-12;35!UBERON:0000065;4.73e-12;44!UBERON:0010371;2.17e-11;31!UBERON:0003929;8.89e-11;7!UBERON:0003126;1.71e-10;7!UBERON:0001005;1.71e-10;7!UBERON:0000485;3.02e-10;7!UBERON:0003350;1.72e-09;8!UBERON:0001828;1.72e-09;8!UBERON:0005911;2.31e-09;36!UBERON:0000072;3.27e-09;37!UBERON:0001003;1.74e-08;15!UBERON:0007376;1.74e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,2.44e-24,3;UBERON:0004815,4.33e-23,3;UBERON:0002031,4.33e-23,3;UBERON:0001911,1.02e-18,4;UBERON:0005333,1.02e-18,4;UBERON:0008425,1.02e-18,4;UBERON:0005311,1.02e-18,4;UBERON:0007196,7.91e-18,15;UBERON:0001558,7.91e-18,15;UBERON:0001004,4.30e-15,74;UBERON:0002185,4.18e-14,5;UBERON:0005178,3.65e-13,34;UBERON:0002224,3.65e-13,34;UBERON:0005181,9.30e-13,35;UBERON:0004807,1.27e-12,28;UBERON:0000065,2.09e-12,54;UBERON:0005153,2.86e-12,37;UBERON:0003126,1.53e-10,7;UBERON:0001005,1.53e-10,7;UBERON:0000076,1.27e-09,8;UBERON:0003350,1.80e-09,8;UBERON:0001828,1.80e-09,8;UBERON:0005157,1.98e-09,47;UBERON:0004119,3.68e-09,160;UBERON:0000925,3.68e-09,160;UBERON:0006595,3.68e-09,160;UBERON:0008947,5.20e-09,38;UBERON:0003258,5.20e-09,38;UBERON:0001003,1.92e-08,15;UBERON:0007376,1.92e-08,15;UBERON:0007383,1.92e-08,15;UBERON:0000915,3.04e-08,52;UBERON:0000485,4.55e-08,9;UBERON:0000072,3.90e-07,47 | |||
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| ||
|short_description=p@chr15:45940864..45940902,+ | |short_description=p@chr15:45940864..45940902,+ | ||
}} | }} |
Latest revision as of 02:05, 25 July 2015
Short description: | p@chr15:45940864..45940902, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:45940864..45940902, + |
Coexpression cluster: | C1740_Keratinocyte_Mammary_Mallassezderived_Gingival_Small_Sebocyte_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 8.08e-46 | 13 |
endo-epithelial cell | 4.54e-33 | 42 |
epithelial cell of tracheobronchial tree | 5.75e-30 | 9 |
epithelial cell of lower respiratory tract | 5.75e-30 | 9 |
gingival epithelial cell | 2.44e-24 | 3 |
duct epithelial cell | 7.91e-24 | 3 |
branched duct epithelial cell | 7.91e-24 | 3 |
tracheal epithelial cell | 7.91e-24 | 3 |
tracheoblast | 7.91e-24 | 3 |
endodermal cell | 2.93e-23 | 58 |
bronchial epithelial cell | 4.33e-23 | 3 |
mammary gland epithelial cell | 1.02e-18 | 4 |
epithelial cell | 1.21e-16 | 253 |
keratinocyte | 2.10e-14 | 5 |
epidermal cell | 5.74e-14 | 9 |
general ecto-epithelial cell | 8.30e-14 | 14 |
stratified squamous epithelial cell | 4.27e-12 | 6 |
keratin accumulating cell | 4.27e-12 | 6 |
stratified epithelial cell | 4.27e-12 | 6 |
keratinizing barrier epithelial cell | 4.27e-12 | 6 |
epithelial fate stem cell | 4.27e-12 | 6 |
stratified epithelial stem cell | 4.27e-12 | 6 |
surface ectodermal cell | 4.27e-12 | 6 |
epithelial cell of esophagus | 9.17e-09 | 1 |
embryonic cell | 1.36e-08 | 250 |
ecto-epithelial cell | 9.38e-08 | 34 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 2.44e-24 | 3 |
lower respiratory tract epithelium | 4.33e-23 | 3 |
epithelium of bronchus | 4.33e-23 | 3 |
mammary gland | 1.02e-18 | 4 |
mammary bud | 1.02e-18 | 4 |
mammary ridge | 1.02e-18 | 4 |
mammary placode | 1.02e-18 | 4 |
tracheobronchial tree | 7.91e-18 | 15 |
lower respiratory tract | 7.91e-18 | 15 |
respiratory system | 4.30e-15 | 74 |
bronchus | 4.18e-14 | 5 |
thoracic cavity element | 3.65e-13 | 34 |
thoracic cavity | 3.65e-13 | 34 |
thoracic segment organ | 9.30e-13 | 35 |
respiratory system epithelium | 1.27e-12 | 28 |
respiratory tract | 2.09e-12 | 54 |
epithelial bud | 2.86e-12 | 37 |
trachea | 1.53e-10 | 7 |
respiratory airway | 1.53e-10 | 7 |
external ectoderm | 1.27e-09 | 8 |
epithelium of mucosa | 1.80e-09 | 8 |
gingiva | 1.80e-09 | 8 |
epithelial fold | 1.98e-09 | 47 |
endoderm-derived structure | 3.68e-09 | 160 |
endoderm | 3.68e-09 | 160 |
presumptive endoderm | 3.68e-09 | 160 |
respiratory primordium | 5.20e-09 | 38 |
endoderm of foregut | 5.20e-09 | 38 |
skin epidermis | 1.92e-08 | 15 |
outer epithelium | 1.92e-08 | 15 |
enveloping layer of ectoderm | 1.92e-08 | 15 |
thoracic segment of trunk | 3.04e-08 | 52 |
simple columnar epithelium | 4.55e-08 | 9 |
segment of respiratory tract | 3.90e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 3.05e-09 | 1 |
mucinous cystadenocarcinoma | 3.05e-09 | 1 |