FFCP PHASE1:Hg19::chr1:149903373..149903476,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:149903373..149903476,-
|short_description=p1@MTMR11
|description=CAGE_peak_1_at_MTMR11_5end
|association_with_transcript=7bp_to_ENST00000495054_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10903 | |EntrezGene=10903 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24307 | |HGNC=24307 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_ENST00000495054_5end | |||
|cluster_id=chr1:149903373..149903476,- | |||
|description=CAGE_peak_1_at_MTMR11_5end | |||
|id=chr1:149903373..149903476,- | |||
|ontology_enrichment_celltype=CL:0002057!1.70e-28!42;CL:0000860!9.76e-27!45;CL:0002194!5.51e-21!63;CL:0000576!5.51e-21!63;CL:0000040!5.51e-21!63;CL:0000559!5.51e-21!63;CL:0002009!3.64e-19!65;CL:0000557!1.32e-15!71;CL:0000766!2.00e-15!76;CL:0000839!3.20e-15!70;CL:0000144!6.37e-14!625;CL:0002371!1.50e-13!591;CL:0000003!1.78e-12!722;CL:0000012!2.86e-11!682;CL:0000548!1.04e-10!679;CL:0000004!1.04e-10!679;CL:0000255!1.04e-10!679;CL:0000763!8.75e-10!112;CL:0000049!8.75e-10!112;CL:0000222!2.99e-08!119;CL:0000359!3.11e-08!32;CL:0000063!2.73e-07!578;CL:0002087!7.84e-07!119;CL:0002393!9.17e-07!9;CL:0002397!9.17e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.72e-25;33!CL:0002057;7.72e-25;33!CL:0000576;2.69e-19;48!CL:0000473;5.54e-16;39!CL:0000234;5.54e-16;39!CL:0000766;4.03e-11;69!CL:0000359;1.81e-08;32!CL:0000071;6.50e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.36e-33,42;CL:0002057,1.36e-33,42;CL:0000473,2.76e-27,48;CL:0000234,2.76e-27,48;CL:0002194,1.46e-23,59;CL:0000576,1.46e-23,59;CL:0000040,1.46e-23,59;CL:0000559,1.46e-23,59;CL:0002009,5.54e-22,61;CL:0000766,3.29e-19,72;CL:0000557,5.63e-19,67;CL:0000839,1.65e-18,66;CL:0000763,7.95e-14,108;CL:0000049,7.95e-14,108;CL:0000359,8.12e-09,32;CL:0002087,1.01e-08,115;CL:0002393,9.49e-08,9;CL:0002397,9.49e-08,9;CL:0000738,1.32e-07,136;CL:0000071,7.99e-07,18;CL:0002546,7.99e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;2.77e-24;42!CL:0002546;6.50e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.78e-27!216;UBERON:0004535!9.26e-18!110;UBERON:0002390!1.17e-17!102;UBERON:0003061!1.17e-17!102;UBERON:0001009!3.21e-17!113;UBERON:0002193!5.98e-17!112;UBERON:0004872!8.79e-15!84;UBERON:0002371!9.01e-15!80;UBERON:0002204!1.02e-14!167;UBERON:0001981!1.07e-14!60;UBERON:0007500!1.07e-14!60;UBERON:0004537!1.07e-14!60;UBERON:0006965!1.07e-14!60;UBERON:0000055!2.77e-14!69;UBERON:0001637!1.06e-13!42;UBERON:0003509!1.06e-13!42;UBERON:0004572!1.06e-13!42;UBERON:0001474!2.54e-13!86;UBERON:0002049!5.95e-13!79;UBERON:0007798!5.95e-13!79;UBERON:0004765!1.85e-12!101;UBERON:0001434!1.85e-12!101;UBERON:0004573!4.22e-11!33;UBERON:0004571!4.22e-11!33;UBERON:0000926!5.36e-11!448;UBERON:0004120!5.36e-11!448;UBERON:0006603!5.36e-11!448;UBERON:0002405!1.45e-08!115;UBERON:0003914!2.34e-08!118;UBERON:0000947!6.00e-07!21;UBERON:0010191!6.00e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.44e-12;42!UBERON:0003509;7.44e-12;42!UBERON:0004572;7.44e-12;42!UBERON:0004573;1.07e-11;33!UBERON:0004571;1.07e-11;33!UBERON:0007500;3.89e-09;56!UBERON:0001981;3.89e-09;56!UBERON:0004537;3.89e-09;56!UBERON:0000947;7.42e-08;21!UBERON:0010191;7.42e-08;21!UBERON:0000055;4.84e-07;65!UBERON:0004638;6.50e-07;18!UBERON:0001986;6.50e-07;18!UBERON:0004852;6.50e-07;18!UBERON:0003914;7.60e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,2.14e-30,203;UBERON:0002390,5.29e-20,98;UBERON:0003061,5.29e-20,98;UBERON:0002371,7.30e-18,76;UBERON:0002193,7.48e-18,108;UBERON:0000926,9.82e-18,315;UBERON:0004120,9.82e-18,315;UBERON:0006603,9.82e-18,315;UBERON:0004535,3.97e-17,109;UBERON:0001474,1.70e-16,82;UBERON:0001009,2.70e-16,112;UBERON:0004765,3.31e-16,90;UBERON:0007500,4.39e-16,59;UBERON:0001981,4.39e-16,59;UBERON:0004537,4.39e-16,59;UBERON:0006965,4.39e-16,59;UBERON:0001637,7.25e-16,42;UBERON:0003509,7.25e-16,42;UBERON:0004572,7.25e-16,42;UBERON:0004872,2.20e-15,83;UBERON:0000055,9.73e-15,68;UBERON:0001434,7.78e-14,100;UBERON:0002405,8.30e-14,93;UBERON:0002204,8.65e-14,167;UBERON:0004573,8.88e-13,33;UBERON:0004571,8.88e-13,33;UBERON:0002049,1.73e-12,78;UBERON:0007798,1.73e-12,78;UBERON:0003914,1.18e-08,117;UBERON:0000947,7.43e-08,21;UBERON:0010191,7.43e-08,21;UBERON:0004638,7.99e-07,18;UBERON:0001986,7.99e-07,18;UBERON:0004852,7.99e-07,18 | |||
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|phase1_expression=0.54503513781167,0,0.281908808191942,0,0,0,0,0,0.261185628199839,1.22866968250754,6.28021051175185,2.83973783769224,1.58260186937072,0.495065411840187,1.32558950291166,12.101852636132,12.0538905604795,11.684961446198,6.8310591830671,0.369363174230364,0.612002073732759,0,0.572471974262113,1.36874425072884,0.502170558379211,0,0.0821005894499457,0,41.3032490691349,52.9684569374154,40.8714565554441,9.19421224478927,9.33738348212575,18.1179464981726,0,0,3.81680571135301,43.7656372740183,57.3557119764605,45.7892937210447,0.447830948479849,0.32389366601898,0.515151135268373,136.96514093035,126.210565192062,110.133163779269,120.398241117145,88.8122638127144,75.5683544984053,75.0877143960813,82.7399082088995,52.4990550352659,127.900647553285,81.9765548151459,54.1705946377367,138.546361903357,97.4274955706509,79.3273900091149,152.73586229308,105.264720880959,78.6384664732821,57.7239775326753,81.1817086520042,68.1959600852311,196.471654551551,119.71828240983,108.993893574226,96.7307361238462,68.8357452314666,68.1972972374066,171.328059245243,140.68205694725,123.420331101945,61.2640330304631,67.6081673888838,48.6408057579432,109.857401261272,82.447114169987,77.6304583746897,67.8330330104172,53.1107528121571,38.5421364443378,0,0.546138611262131,0,4.69403244823158,0,1.14950487990897,0.661044872784862,0,0,3.52342313622563,0.382273228125229,1.32171328579026,5.04457706683382,2.89722493252585,0,0,0.616804496998528,53.3324920296263,0,0,0,35.9855775739111,0,0.443067789167242,0.270803863765016,56.6163633187484,40.1883383960024,2.30213066445147,4.69795030235942,5.506258628966,0,0,0,3.96582699441482,0,0,0,0.95569624297229,1.30216690771284,0,3.61380285786655,1.91979916731628,1.24930726552346,4.97232229292435,0.821127996921047,0.201606743224732,0,0.144824403882799,0,1.34140171940727,0.767175371061182,3.61439152384566,0,1.01392563272577,0,0,2.07976597760949,0.443458794925128,2.81071314218003,0.458426764241994,8.37879163072847,3.70784442784429,0,0,0.531831842075461,2.14641561874808,6.86393892936153,0.74291500265913,8.54678351676832,4.30117297553062,13.1913390610886,5.6530794192401,10.9069853414576,11.2798397195428,6.06085402956751,0.258416759169329,0.71153252537342,0.33472061276467,17.3216606356933,1.52054421143703,7.32186172644509,8.08858776760911,8.1014194788176,2.85759130509055,2.2452937262617,1.12611480483322,7.66583187329416,5.69559395740877,6.22885929363385,0,0,6.10531672999548,2.98183171017191,7.97772223486853,2.78059279707759,3.72887606973458,5.32002573297536,3.36406560085384,11.7423895302675,7.4000264525148,2.17847724779836,15.4917272880141,10.6250237023748,0.908144565869588,0.576175924479999,1.40592859100278,2.80944069147288,2.2818872861778,1.79338416662161,0.352303495931295,0.161872944368132,0.421352420106746,2.24569588380383,3.68502951935304,0.826606249406124,0,0.247266929278557,0.910161361938026,0,2.69337782326506,2.12701483782339,0.831192346452549,0,0.612975591598039,0,9.98203211808185,1.97328599257748,0.213557388818567,0.635795703478686,1.80054657650641,0.92747276314595,0.772921620136887,0.930584281657949,1.35021065793013,1.26668106709558,2.27190396819703,0.0920498986422993,0.80823028409406,3.55009592516614,2.41805035746337,2.03472710772585,11.9821728961244,13.3645599089509,10.8985746247821,0.365921118388786,0,0.116193942869518,0.621966330092223,0.504641701751257,0.36497735907583,1.56449532329816,1.92972281457866,4.14404764057442,0.928735856063958,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,2.95262181849859,8.41450642820675,0.4115740113314,0,0,0,0,0,0,1.88724591328378,4.60951198716227,20.2323155863715,7.53967293087231,3.98130314181677,2.93227474779292,1.03993478527958,5.77325368101093,0.695582429850461,0.939269553886573,12.7042474029745,11.5746378144153,5.32711626256875,0,0,0.492434012174795,0.702012795417713,0.297262324577456,8.43604505880993,5.03946384596579,5.67100388969546,6.89600624811932,3.19697332365358,4.98397482914775,0,0,0,0,0,0,0,0,1.71072446022705,0,0.300343057843917,0,8.8583556632835,0.43596006883328,12.6875234470244,0.129271715757778,3.57656445851882,0,0,0,3.08648849114571,4.25547396069835,7.19339883343468,0.142977993658148,0,0,0.325736184293735,0,1.58390374586686,4.82303003295338,4.35766729300147,3.499054691372,0,0.502257091432126,2.10833939483032,3.35474797688216,0,0,2.46128221334885,3.08214483825575,1.79060963239896,0.224170287987055,4.53170748464433,0.215627574859517,2.69520376187472,0.508189248444927,0,1.54657762555539,0,0,0,2.99161459204025,0,0.12269149171914,3.00102312635806,0.813795071099207,1.03985430765404,2.3195768543631,1.41932173530541,0.937131319941706,0.300946099727719,0,0,0.664225598535437,1.65932251687533,0.955719759148911,0,0,19.6429624816743,41.8485549588117,18.3571399421924,0,4.99306318531491,0.604780586659361,4.71404834855676,1.07423381301644,0.561320188866147,2.30650468660262,0,1.12597744800525,1.48418066444991,0.462629081407967,0.710246901252508,1.14978018419333,11.9428518712233,1.27831416305955,0.241718899183244,3.60911646545913,0.46040494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| ||
|short_description=p1@MTMR11 | |||
}} | }} |
Latest revision as of 21:01, 16 September 2015
Short description: | p1@MTMR11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MTMR11_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000495054_5end |
EntrezGene: | MTMR11 |
HGNC: | 24307 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.36e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.36e-33 | 42 |
defensive cell | 2.76e-27 | 48 |
phagocyte | 2.76e-27 | 48 |
monopoietic cell | 1.46e-23 | 59 |
monocyte | 1.46e-23 | 59 |
monoblast | 1.46e-23 | 59 |
promonocyte | 1.46e-23 | 59 |
macrophage dendritic cell progenitor | 5.54e-22 | 61 |
myeloid leukocyte | 3.29e-19 | 72 |
granulocyte monocyte progenitor cell | 5.63e-19 | 67 |
myeloid lineage restricted progenitor cell | 1.65e-18 | 66 |
myeloid cell | 7.95e-14 | 108 |
common myeloid progenitor | 7.95e-14 | 108 |
vascular associated smooth muscle cell | 8.12e-09 | 32 |
nongranular leukocyte | 1.01e-08 | 115 |
intermediate monocyte | 9.49e-08 | 9 |
CD14-positive, CD16-positive monocyte | 9.49e-08 | 9 |
leukocyte | 1.32e-07 | 136 |
blood vessel endothelial cell | 7.99e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.99e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 2.14e-30 | 203 |
hematopoietic system | 5.29e-20 | 98 |
blood island | 5.29e-20 | 98 |
bone marrow | 7.30e-18 | 76 |
hemolymphoid system | 7.48e-18 | 108 |
mesoderm | 9.82e-18 | 315 |
mesoderm-derived structure | 9.82e-18 | 315 |
presumptive mesoderm | 9.82e-18 | 315 |
cardiovascular system | 3.97e-17 | 109 |
bone element | 1.70e-16 | 82 |
circulatory system | 2.70e-16 | 112 |
skeletal element | 3.31e-16 | 90 |
epithelial tube open at both ends | 4.39e-16 | 59 |
blood vessel | 4.39e-16 | 59 |
blood vasculature | 4.39e-16 | 59 |
vascular cord | 4.39e-16 | 59 |
artery | 7.25e-16 | 42 |
arterial blood vessel | 7.25e-16 | 42 |
arterial system | 7.25e-16 | 42 |
splanchnic layer of lateral plate mesoderm | 2.20e-15 | 83 |
vessel | 9.73e-15 | 68 |
skeletal system | 7.78e-14 | 100 |
immune system | 8.30e-14 | 93 |
musculoskeletal system | 8.65e-14 | 167 |
systemic artery | 8.88e-13 | 33 |
systemic arterial system | 8.88e-13 | 33 |
vasculature | 1.73e-12 | 78 |
vascular system | 1.73e-12 | 78 |
epithelial tube | 1.18e-08 | 117 |
aorta | 7.43e-08 | 21 |
aortic system | 7.43e-08 | 21 |
blood vessel endothelium | 7.99e-07 | 18 |
endothelium | 7.99e-07 | 18 |
cardiovascular system endothelium | 7.99e-07 | 18 |