FFCP PHASE1:Hg19::chr13:41239023..41239039,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:41239023..41239039,+ | |||
|coexpression_cluster_id=C9 | |coexpression_cluster_id=C9 | ||
|description=CAGE_peak_at_chr13:41239023..41239039,+ | |description=CAGE_peak_at_chr13:41239023..41239039,+ | ||
|id=chr13:41239023..41239039,+ | |id=chr13:41239023..41239039,+ | ||
|ontology_enrichment_celltype=CL:0000136;5.12e-27;13!CL:0000115;5.18e-09;36!CL:0000071;5.79e-09;18!CL:0002262;1.55e-08;2!CL:1000398;1.55e-08;2!CL:0002617;1.97e-08;2 | |ontology_enrichment_celltype=CL:0002139!1.16e-10!24;CL:0000115!8.50e-09!35;CL:0000071!1.73e-08!18;CL:0002546!1.73e-08!18;CL:0000136!1.20e-07!15;CL:0000542!1.27e-07!53;CL:0000051!1.27e-07!53;CL:0000838!1.88e-07!52;CL:0002087!3.39e-07!119 | ||
| | |ontology_enrichment_celltype_v019=CL:0000136;5.12e-27;13!CL:0000115;5.18e-09;36!CL:0000071;5.79e-09;18!CL:0002262;1.55e-08;2!CL:1000398;1.55e-08;2!CL:0002617;1.97e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.86e-23,15;CL:0000115,6.49e-10,36;CL:0000071,5.32e-09,18;CL:0002546,5.32e-09,18;CL:0002262,1.44e-08,2;CL:1000398,1.44e-08,2;CL:0002617,2.33e-08,2;CL:0002078,1.73e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;5.79e-09;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004638;5.79e-09;18!UBERON:0001986;5.79e-09;18!UBERON:0004852;5.79e-09;18!UBERON:0001281;1.55e-08;2!UBERON:0003497;1.55e-08;2!UBERON:0003909;1.55e-08;2!UBERON:0003835;1.55e-08;2!UBERON:0000487;3.77e-07;22!UBERON:0001638;9.57e-07;9!UBERON:0003920;9.57e-07;9!UBERON:0004582;9.57e-07;9 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.73e-08!18;UBERON:0004638!1.73e-08!18;UBERON:0004852!1.73e-08!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.79e-09;18!UBERON:0001986;5.79e-09;18!UBERON:0004852;5.79e-09;18!UBERON:0001281;1.55e-08;2!UBERON:0003497;1.55e-08;2!UBERON:0003909;1.55e-08;2!UBERON:0003835;1.55e-08;2!UBERON:0000487;3.77e-07;22!UBERON:0001638;9.57e-07;9!UBERON:0003920;9.57e-07;9!UBERON:0004582;9.57e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.32e-09,18;UBERON:0001986,5.32e-09,18;UBERON:0004852,5.32e-09,18;UBERON:0001281,1.44e-08,2;UBERON:0003497,1.44e-08,2;UBERON:0003909,1.44e-08,2;UBERON:0003835,1.44e-08,2;UBERON:0000487,3.52e-07,22;UBERON:0001638,9.98e-07,9;UBERON:0003920,9.98e-07,9;UBERON:0004582,9.98e-07,9 | |||
|phase1_expression=1.2717486548939,9.63452357509424,2.81908808191942,0,8.04529969969118,0.872338524100369,5.06599756336621,0,1.30592814099919,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0,0,0,0,0,0,0.229240217243854,0.410502947249729,0.472264687882075,0.393364276848904,0,1.08371286321253,0,0,0.739508020333575,0.387336002901508,0.284338464974843,0,1.66198622559563,0.802177789880567,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0.727752183563449,0.232429036905685,0,0,0.575384784644301,0.256160706529101,0,0,0,1.35426486594342,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.434377689410233,0,0,0,0.422510572623884,1.06302149982522,0.209658645508376,0.336985893439485,0.300353785683013,0.16072558669708,1.14005097496499,1.79025009479181,0.547992461293902,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0,0.661044872784862,0,1.70763890732835,0,0.764546456250458,0,0.560508562981536,0,0.786839080455332,1.96505381374582,1.23360899399706,0.501559486172034,0,0.473447805734733,1.94826728407911,0.111410456885174,0.883817722424512,1.10766947291811,1.08321545506006,0.25618263945135,0.520237390239513,0.164437904603676,0.276350017785848,0.579606171470105,0,0,0,0.113309342697566,0.766440987203842,0.68725489096526,0.759059076058509,0,0,0,0,0,1.24930726552346,0.236777252044017,0,0.403213486449465,0.267440195783507,0.579297615531196,2.43806866313962,0,0,0,0,0.434539556882471,0.795285947051099,0,0,0,0,0.261958150995425,0,0,0,0.174129737299267,0,0,0,0,0.39752481473341,2.58070378531837,2.42998351125316,0,0.838998872419812,0.825354125820202,0.626984899610432,0.258416759169329,0.35576626268671,0.33472061276467,0,0,1.46437234528902,1.47065232138347,0.81014194788176,0.714397826272638,0.22452937262617,1.80178368773316,3.06633274931766,0.949265659568129,2.01521918323448,2.63560834872127,0,0.436094052142534,0,0,0,0,0,0,3.20246987189115,0,0.933633106199299,0.269421344139376,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0.161646056818812,0,0,0,0,0,0.286804595389004,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0,0.482022059766964,0.110293972732394,0,0,0.539325232640658,0.196221465125346,0.38474715694639,2.21446636387394,2.80483547606892,0.4115740113314,0,0,0,0.590789906681404,0,0.245976877086227,0,0.109750285408626,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0.925971025153221,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.25248486685276,0,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0.428933980974443,2.71310802695722,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,1.2328579353023,0.716243852959582,0.112085143993527,0.591092280605782,0.431255149719035,1.02674429023799,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0.640365346820666,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.512556597022804,1.02341449813341,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.368323955743585,0,0,0,0,0,0,0,0,0,1.36074964221213,0.647747748306418,1.54227252690289,0,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0,0.618246069886334,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0.096670718292122,0,0,0.137836572484531,0,0,0,0.356128142586949,0.165284915360978,0,0.127612712494584,0,0,0,0,0.616067160352178,0,0,0.18532421910392,0,0,0,0.38126038784765,0.255897791311334,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0.238231775457789,0,1.29694662238543,0.540031437238115,0.79312517629427,0,0,0,0.185803175125719,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,5.56731081233197,0,0.445773537109913,0,0.47748896947538,0,0,0,0.422008249231538,0,0,0,0.597743964753209,0.828851746593443,0.251932747854276,0,0,0,0,0,0,0.197286811273867,0,0,0,0.0927680981618513,0,0,0.0874599999961957,5.07499702804355,0,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,1.27600463892768,1.64875668123352,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,1.99052386215701,0.265372693510018,0,1.48260564340311,0.123563938946503,0.104421949505455,0.269604531922708,0,0,0.547364367646998,0,0,0,0,0,0.31593289814244,0,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0,0,0,0,0,0.391102765469606,0,0.85381197895741,0,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0.525774708558629,2.79282401272254,0.458320848023367,0,0.199679000498991,0,0,0.134366944973453,0,0,0.472699093843342,0.412079291905832,0.471824806979294,0,0.0846733320657845,0,0.136203406111576,0.482259445395058,0.137539436597234,0,0.2249738915515,0,0.0607495566580247,0.335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| ||
|short_description=p@chr13:41239023..41239039,+ | |short_description=p@chr13:41239023..41239039,+ | ||
}} | }} |
Latest revision as of 15:58, 24 July 2015
Short description: | p@chr13:41239023..41239039, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:41239023..41239039, + |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.86e-23 | 15 |
endothelial cell | 6.49e-10 | 36 |
blood vessel endothelial cell | 5.32e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.32e-09 | 18 |
endothelial cell of sinusoid | 1.44e-08 | 2 |
endothelial cell of hepatic sinusoid | 1.44e-08 | 2 |
adipocyte of breast | 2.33e-08 | 2 |
meso-epithelial cell | 1.73e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 5.32e-09 | 18 |
endothelium | 5.32e-09 | 18 |
cardiovascular system endothelium | 5.32e-09 | 18 |
hepatic sinusoid | 1.44e-08 | 2 |
abdomen blood vessel | 1.44e-08 | 2 |
sinusoid | 1.44e-08 | 2 |
abdominal segment blood vessel | 1.44e-08 | 2 |
simple squamous epithelium | 3.52e-07 | 22 |
vein | 9.98e-07 | 9 |
venous blood vessel | 9.98e-07 | 9 |
venous system | 9.98e-07 | 9 |