FFCP PHASE1:Hg19::chr6:45984005..45984019,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53405 | |EntrezGene=53405 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13517 | |HGNC=13517 | ||
|TSSclassifier=strong | |||
|UniProt=Q53G01,Q9NZA1,Q8NBY3 | |UniProt=Q53G01,Q9NZA1,Q8NBY3 | ||
|association_with_transcript=-408bp_to_NM_016929,uc003oxu.3,uc003oxx.2_5end | |association_with_transcript=-408bp_to_NM_016929,uc003oxu.3,uc003oxx.2_5end | ||
|cluster_id=chr6:45984005..45984019,- | |||
|description=CAGE_peak_13_at_CLIC5_5end | |description=CAGE_peak_13_at_CLIC5_5end | ||
|id=chr6:45984005..45984019,- | |id=chr6:45984005..45984019,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:3112;2.05e-29;1 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0002106;2.18e-38;3!UBERON:0002171;2.05e-29;1!UBERON:0006518;2.05e-29;1!UBERON:0008949;2.05e-29;1!UBERON:0000101;2.05e-29;1!UBERON:0002167;2.05e-29;1!UBERON:0004177;1.61e-23;5!UBERON:0005057;1.61e-23;5!UBERON:0002075;2.95e-07;18!UBERON:0002046;5.86e-07;5 | |ontology_enrichment_development_v019=UBERON:0004872;4.02e-17;7!UBERON:0007123;5.86e-07;5 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;2.05e-29;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,2.37e-29,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.03e-20!115;UBERON:0002619!1.34e-11!22;UBERON:0002020!1.31e-10!34;UBERON:0003528!1.31e-10!34;UBERON:0000956!4.51e-10!25;UBERON:0000203!4.51e-10!25;UBERON:0001950!4.58e-10!20;UBERON:0001049!2.00e-09!57;UBERON:0005068!2.00e-09!57;UBERON:0006241!2.00e-09!57;UBERON:0007135!2.00e-09!57;UBERON:0002791!5.15e-09!33;UBERON:0001893!1.05e-08!34;UBERON:0002780!1.47e-08!41;UBERON:0001890!1.47e-08!41;UBERON:0006240!1.47e-08!41;UBERON:0003075!2.58e-08!86;UBERON:0007284!2.58e-08!86;UBERON:0003080!2.61e-08!42;UBERON:0002148!3.14e-08!2;UBERON:0009662!3.14e-08!2;UBERON:0001871!7.59e-08!7;UBERON:0002346!8.68e-08!90;UBERON:0002616!1.18e-07!59;UBERON:0001869!1.34e-07!32;UBERON:0003056!2.23e-07!61;UBERON:0005743!4.22e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.18e-38;3!UBERON:0002171;2.05e-29;1!UBERON:0006518;2.05e-29;1!UBERON:0008949;2.05e-29;1!UBERON:0000101;2.05e-29;1!UBERON:0002167;2.05e-29;1!UBERON:0004177;1.61e-23;5!UBERON:0005057;1.61e-23;5!UBERON:0002075;2.95e-07;18!UBERON:0002046;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.49e-38,3;UBERON:0004854,1.49e-38,3;UBERON:0009034,1.49e-38,3;UBERON:0002095,1.49e-38,3;UBERON:0004782,1.49e-38,3;UBERON:0003281,1.49e-38,3;UBERON:0009664,1.49e-38,3;UBERON:0002296,1.49e-38,3;UBERON:0005602,1.49e-38,3;UBERON:0001179,1.49e-38,3;UBERON:0006293,1.49e-38,3;UBERON:0002171,3.16e-29,1;UBERON:0006518,3.16e-29,1;UBERON:0008949,3.16e-29,1;UBERON:0000101,3.16e-29,1;UBERON:0002167,3.16e-29,1;UBERON:0004177,3.42e-17,7;UBERON:0005057,3.42e-17,7;UBERON:0000945,3.53e-15,8;UBERON:0010039,3.53e-15,8;UBERON:0004457,1.85e-10,12;UBERON:0000042,1.85e-10,12;UBERON:0003887,1.85e-10,12;UBERON:0002075,2.77e-07,18;UBERON:0002046,6.04e-07,5;UBERON:0004117,6.04e-07,5;UBERON:0007689,6.04e-07,5;UBERON:0007123,6.04e-07,5;UBERON:0003091,6.04e-07,5 | |||
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| ||
|short_description=p13@CLIC5 | |short_description=p13@CLIC5 | ||
}} | }} |
Latest revision as of 02:05, 19 September 2015
Short description: | p13@CLIC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_CLIC5_5end |
Coexpression cluster: | NA |
Association with transcript: | -408bp_to_NM_016929, uc003oxu.3, uc003oxx.2_5end |
EntrezGene: | CLIC5 |
HGNC: | 13517 |
UniProt: | Q53G01Q9NZA1Q8NBY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 1.49e-38 | 3 |
gastrointestinal system mesentery | 1.49e-38 | 3 |
stomach region | 1.49e-38 | 3 |
mesentery | 1.49e-38 | 3 |
gastrointestinal system serosa | 1.49e-38 | 3 |
mesentery of stomach | 1.49e-38 | 3 |
gut mesentery | 1.49e-38 | 3 |
dorsal mesentery | 1.49e-38 | 3 |
dorsal mesogastrium | 1.49e-38 | 3 |
peritoneal cavity | 1.49e-38 | 3 |
spleen primordium | 1.49e-38 | 3 |
lower lobe of right lung | 3.16e-29 | 1 |
right lung lobe | 3.16e-29 | 1 |
lower lobe of lung | 3.16e-29 | 1 |
lobe of lung | 3.16e-29 | 1 |
right lung | 3.16e-29 | 1 |
hemopoietic organ | 3.42e-17 | 7 |
immune organ | 3.42e-17 | 7 |
stomach | 3.53e-15 | 8 |
food storage organ | 3.53e-15 | 8 |
cavity lining | 1.85e-10 | 12 |
serous membrane | 1.85e-10 | 12 |
intraembryonic coelom | 1.85e-10 | 12 |
viscus | 2.77e-07 | 18 |
thyroid gland | 6.04e-07 | 5 |
pharyngeal pouch | 6.04e-07 | 5 |
thyroid diverticulum | 6.04e-07 | 5 |
pharyngeal pouch 2 | 6.04e-07 | 5 |
thyroid primordium | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 2.37e-29 | 1 |