FFCP PHASE1:Hg19::chr10:8087174..8087187,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:8087174..8087187,+ | |||
|coexpression_cluster_id=C114 | |coexpression_cluster_id=C114 | ||
|description=CAGE_peak_at_chr10:8087174..8087187,+ | |description=CAGE_peak_at_chr10:8087174..8087187,+ | ||
|id=chr10:8087174..8087187,+ | |id=chr10:8087174..8087187,+ | ||
|ontology_enrichment_celltype=CL:0000214;1.12e-17;3!CL:0002327;1.00e-13;4!CL:0000153;8.85e-07;9!CL:0000447;8.85e-07;9 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000214;1.12e-17;3!CL:0002327;1.00e-13;4!CL:0000153;8.85e-07;9!CL:0000447;8.85e-07;9 | ||
|ontology_enrichment_disease=DOID:5093;1.00e-13;4!DOID:1612;1.00e-13;4 | |ontology_enrichment_celltype_v019_2=CL:0000214,1.12e-17,3;CL:0002327,1.00e-13,4;CL:0000153,8.85e-07,9;CL:0000447,8.85e-07,9 | ||
|ontology_enrichment_uberon=UBERON:0006915;1.12e-17;3!UBERON:0007616;1.12e-17;3!UBERON:0002217;1.12e-17;3!UBERON:0002018;1.12e-17;3!UBERON:0001911;1.00e-13;4!UBERON:0004905;1.80e-07;8!UBERON:0000982;1.80e-07;8!UBERON:0004770;1.80e-07;8!UBERON:0004457;8.85e-07;9!UBERON:0000042;8.85e-07;9 | |ontology_enrichment_development_v019=UBERON:0008425;2.42e-50;1 | ||
|ontology_enrichment_disease=DOID:5093!9.81e-31!4;DOID:1612!9.81e-31!4;DOID:9119!6.65e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.00e-13;4!DOID:1612;1.00e-13;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.00e-13,4;DOID:1612,1.00e-13,4 | |||
|ontology_enrichment_uberon=UBERON:0000310!1.98e-12!10;UBERON:0001443!2.58e-11!11;UBERON:0006947!4.00e-11!3;UBERON:0004054!4.00e-11!3;UBERON:0000988!1.60e-10!3;UBERON:0002294!4.34e-10!7;UBERON:0001173!4.34e-10!7;UBERON:0004912!4.34e-10!7;UBERON:0000998!5.28e-09!1;UBERON:0006868!5.28e-09!1;UBERON:0001000!6.16e-09!1;UBERON:0005352!6.16e-09!1;UBERON:0004913!8.36e-09!1;UBERON:0003703!8.36e-09!1;UBERON:0001174!8.36e-09!1;UBERON:0004914!8.36e-09!1;UBERON:0005904!1.48e-08!4;UBERON:0002394!2.40e-08!4;UBERON:0003928!2.40e-08!4;UBERON:0000013!5.24e-07!5;UBERON:0002410!5.24e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.12e-17;3!UBERON:0007616;1.12e-17;3!UBERON:0002217;1.12e-17;3!UBERON:0002018;1.12e-17;3!UBERON:0001911;1.00e-13;4!UBERON:0004905;1.80e-07;8!UBERON:0000982;1.80e-07;8!UBERON:0004770;1.80e-07;8!UBERON:0004457;8.85e-07;9!UBERON:0000042;8.85e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.12e-17,3;UBERON:0007616,1.12e-17,3;UBERON:0002217,1.12e-17,3;UBERON:0002018,1.12e-17,3;UBERON:0001911,1.00e-13,4;UBERON:0005333,1.00e-13,4;UBERON:0008425,1.00e-13,4;UBERON:0005311,1.00e-13,4;UBERON:0000076,1.59e-07,8;UBERON:0004905,1.80e-07,8;UBERON:0000982,1.80e-07,8;UBERON:0004770,1.80e-07,8 | |||
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|short_description=p@chr10:8087174..8087187,+ | |short_description=p@chr10:8087174..8087187,+ | ||
}} | }} |
Latest revision as of 15:52, 23 July 2015
Short description: | p@chr10:8087174..8087187, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:8087174..8087187, + |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.12e-17 | 3 |
mammary gland epithelial cell | 1.00e-13 | 4 |
GAG secreting cell | 8.85e-07 | 9 |
carbohydrate secreting cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.12e-17 | 3 |
layer of synovial tissue | 1.12e-17 | 3 |
synovial joint | 1.12e-17 | 3 |
synovial membrane of synovial joint | 1.12e-17 | 3 |
mammary gland | 1.00e-13 | 4 |
mammary bud | 1.00e-13 | 4 |
mammary ridge | 1.00e-13 | 4 |
mammary placode | 1.00e-13 | 4 |
external ectoderm | 1.59e-07 | 8 |
articulation | 1.80e-07 | 8 |
skeletal joint | 1.80e-07 | 8 |
articular system | 1.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.00e-13 | 4 |
breast cancer | 1.00e-13 | 4 |