FFCP PHASE1:Hg19::chr20:52224991..52225016,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:52224991..52225016,- | |||
|coexpression_cluster_id=C925 | |coexpression_cluster_id=C925 | ||
|description=CAGE_peak_at_chr20:52224991..52225016,- | |description=CAGE_peak_at_chr20:52224991..52225016,- | ||
|id=chr20:52224991..52225016,- | |id=chr20:52224991..52225016,- | ||
|ontology_enrichment_celltype=CL:0000039;5.02e-43;7!CL:0000586;5.02e-43;7!CL:0002541;9.22e-09;3 | |ontology_enrichment_celltype=CL:0000039!9.96e-22!7;CL:0000586!9.96e-22!7;CL:0002322!9.53e-14!5;CL:0002541!2.06e-09!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000039;5.02e-43;7!CL:0000586;5.02e-43;7!CL:0002541;9.22e-09;3 | ||
|ontology_enrichment_disease=DOID:1036;3.03e-18;8!DOID:3095;5.75e-17;22!DOID:2994;5.75e-17;22!DOID:8692;4.18e-14;31!DOID:1240;2.67e-09;39!DOID:1799;1.49e-07;1!DOID:10165;1.49e-07;1!DOID:1798;1.49e-07;1!DOID:8552;2.09e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0000039,4.73e-43,7;CL:0000586,4.73e-43,7;CL:0002541,9.04e-09,3 | ||
|ontology_enrichment_uberon=UBERON:0000473;8.46e-13;8!UBERON:0003135;2.49e-09;11!UBERON:0003124;9.22e-09;3!UBERON:0000920;9.22e-09;3 | |ontology_enrichment_development_v019=UBERON:0009117;2.95e-10;10!UBERON:0005564;2.95e-10;10!UBERON:0003124;2.37e-07;1 | ||
|ontology_enrichment_disease=DOID:3095!7.55e-10!22;DOID:2994!7.55e-10!22;DOID:1036!2.86e-09!8;DOID:8692!1.36e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1036;3.03e-18;8!DOID:3095;5.75e-17;22!DOID:2994;5.75e-17;22!DOID:8692;4.18e-14;31!DOID:1240;2.67e-09;39!DOID:1799;1.49e-07;1!DOID:10165;1.49e-07;1!DOID:1798;1.49e-07;1!DOID:8552;2.09e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.62e-18,8;DOID:3095,5.63e-17,22;DOID:2994,5.63e-17,22;DOID:8692,6.69e-14,31;DOID:1240,9.48e-11,39;DOID:162,9.36e-10,235;DOID:14566,1.89e-09,239;DOID:2531,7.02e-08,51;DOID:0060083,7.02e-08,51;DOID:1799,1.54e-07,1;DOID:10165,1.54e-07,1;DOID:1798,1.54e-07,1;DOID:8552,2.09e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.25e-13!8;UBERON:0000476!2.06e-09!3;UBERON:0000920!2.06e-09!3;UBERON:0003135!2.66e-09!11;UBERON:0005631!5.79e-09!14;UBERON:0000158!5.79e-09!14;UBERON:0003124!6.45e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.46e-13;8!UBERON:0003135;2.49e-09;11!UBERON:0003124;9.22e-09;3!UBERON:0000920;9.22e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.21e-13,8;UBERON:0003135,2.44e-09,11;UBERON:0000920,9.04e-09,3;UBERON:0003124,3.74e-08,7 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0.426730222566507,0.800791974072025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.403213486449465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,1.21973706129595,0.530119073285941,0.464775771478074,0.207322110030741,1.26160425437814,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.261435451024901,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,1.01489521846434,0,0,0,0,0,0,0,1.92283328029452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22724939116194,2.46174797895425,0.811367035427949,0,4.22961015263549,0,0,6.67482869622324,0,0,0.71623345421307,0.296964680832639,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.57656570526979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8338342632836,55.3804666008294,29.1174956750982,2.55200927785536,0.641183153813036,3.73124343213044,0,0,9.30785418640876,4.51191321234361,3.52912561771931,2.68514539161348,1.70778359451767,13.0327994763911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.385339937824,0,30.9248809647972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06172751012966,0,0,0,0,0,0,0,0,27.2382962260679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.32214220975833,0,0,0,0,0,0,0,0,0.840816489941367,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61624199710651,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98339014767326,10.3892770829378,27.3330063708511,44.8925240846142,38.2282782064955,55.4063661836149,0.151557396436479,0.803892390468535,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:52224991..52225016,- | |short_description=p@chr20:52224991..52225016,- | ||
}} | }} |
Latest revision as of 15:29, 28 July 2015
Short description: | p@chr20:52224991..52225016, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:52224991..52225016, - |
Coexpression cluster: | C925_testicular_pancreatic_choriocarcinoma_placenta_H9_chorionic_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.73e-43 | 7 |
germ cell | 4.73e-43 | 7 |
chorionic membrane mesenchymal stem cell | 9.04e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 8.21e-13 | 8 |
male reproductive organ | 2.44e-09 | 11 |
egg chorion | 9.04e-09 | 3 |
chorion | 3.74e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.62e-18 | 8 |
germ cell and embryonal cancer | 5.63e-17 | 22 |
germ cell cancer | 5.63e-17 | 22 |
myeloid leukemia | 6.69e-14 | 31 |
leukemia | 9.48e-11 | 39 |
cancer | 9.36e-10 | 235 |
disease of cellular proliferation | 1.89e-09 | 239 |
hematologic cancer | 7.02e-08 | 51 |
immune system cancer | 7.02e-08 | 51 |
islet cell tumor | 1.54e-07 | 1 |
endocrine pancreas cancer | 1.54e-07 | 1 |
pancreatic endocrine carcinoma | 1.54e-07 | 1 |
chronic myeloid leukemia | 2.09e-07 | 1 |