FFCP PHASE1:Hg19::chr5:44809742..44809753,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10884 | |EntrezGene=10884 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8769 | |HGNC=8769 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-191bp_to_ENST00000515647,uc003joi.1_5end | |association_with_transcript=-191bp_to_ENST00000515647,uc003joi.1_5end | ||
|cluster_id=chr5:44809742..44809753,+ | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_9_at_MRPS30_5end | |description=CAGE_peak_9_at_MRPS30_5end | ||
|id=chr5:44809742..44809753,+ | |id=chr5:44809742..44809753,+ | ||
|ontology_enrichment_celltype=CL:0000138;7.67e-18;6!CL:0000153;2.19e-12;9!CL:0000447;2.19e-12;9!CL:0000327;5.55e-08;15 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000138;7.67e-18;6!CL:0000153;2.19e-12;9!CL:0000447;2.19e-12;9!CL:0000327;5.55e-08;15 | ||
|ontology_enrichment_disease=DOID:3371;9.37e-99;1!DOID:4549;9.37e-99;1!DOID:5861;9.37e-99;1!DOID:6496;9.37e-99;1!DOID:201;7.67e-18;6!DOID:0060100;7.67e-18;6 | |ontology_enrichment_celltype_v019_2=CL:0000058,7.67e-18,6;CL:0000138,7.67e-18,6;CL:0000153,2.19e-12,9;CL:0000447,2.19e-12,9;CL:0000327,5.55e-08,15 | ||
|ontology_enrichment_uberon=UBERON:0002702;4.52e-50;2!UBERON:0002418;4.27e-34;3!UBERON:0004755;4.27e-34;3!UBERON:0001870;5.96e-34;3!UBERON:0000200;9.07e-18;6!UBERON:0001474;7.18e-07;18 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:3371!3.06e-09!1;DOID:4549!3.06e-09!1;DOID:5861!3.06e-09!1;DOID:6496!3.06e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3371;9.37e-99;1!DOID:4549;9.37e-99;1!DOID:5861;9.37e-99;1!DOID:6496;9.37e-99;1!DOID:201;7.67e-18;6!DOID:0060100;7.67e-18;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.37e-99,1;DOID:4549,9.37e-99,1;DOID:5861,9.37e-99,1;DOID:6496,9.37e-99,1;DOID:201,7.67e-18,6;DOID:0060100,7.67e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0000200!1.02e-30!6;UBERON:0001950!2.59e-21!20;UBERON:0002619!2.27e-19!22;UBERON:0000956!5.15e-17!25;UBERON:0000203!5.15e-17!25;UBERON:0001869!1.11e-16!32;UBERON:0002780!5.96e-16!41;UBERON:0001890!5.96e-16!41;UBERON:0006240!5.96e-16!41;UBERON:0001870!7.31e-16!2;UBERON:0001893!1.19e-15!34;UBERON:0003080!1.53e-15!42;UBERON:0001871!6.67e-15!7;UBERON:0002791!9.23e-13!33;UBERON:0002020!2.29e-12!34;UBERON:0003528!2.29e-12!34;UBERON:0001049!4.20e-11!57;UBERON:0005068!4.20e-11!57;UBERON:0006241!4.20e-11!57;UBERON:0007135!4.20e-11!57;UBERON:0002771!8.06e-11!3;UBERON:0002616!1.12e-10!59;UBERON:0000955!1.18e-10!69;UBERON:0006238!1.18e-10!69;UBERON:0001017!1.56e-10!82;UBERON:0000073!1.60e-10!94;UBERON:0001016!1.60e-10!94;UBERON:0003056!2.78e-10!61;UBERON:0005743!5.85e-10!86;UBERON:0002702!3.31e-09!1;UBERON:0007190!9.02e-09!1;UBERON:0002581!2.06e-08!1;UBERON:0004121!7.08e-07!169;UBERON:0003075!7.26e-07!86;UBERON:0007284!7.26e-07!86;UBERON:0001872!8.41e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002702;4.52e-50;2!UBERON:0002418;4.27e-34;3!UBERON:0004755;4.27e-34;3!UBERON:0001870;5.96e-34;3!UBERON:0000200;9.07e-18;6!UBERON:0001474;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,4.52e-50,2;UBERON:0002418,4.27e-34,3;UBERON:0004755,4.27e-34,3;UBERON:0001870,5.96e-34,3;UBERON:0000200,9.07e-18,6 | |||
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|short_description=p9@MRPS30 | |short_description=p9@MRPS30 | ||
}} | }} |
Latest revision as of 01:12, 18 September 2015
Short description: | p9@MRPS30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MRPS30_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -191bp_to_ENST00000515647, uc003joi.1_5end |
EntrezGene: | MRPS30 |
HGNC: | 8769 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.67e-18 | 6 |
chondrocyte | 7.67e-18 | 6 |
GAG secreting cell | 2.19e-12 | 9 |
carbohydrate secreting cell | 2.19e-12 | 9 |
extracellular matrix secreting cell | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 4.52e-50 | 2 |
cartilage tissue | 4.27e-34 | 3 |
skeletal tissue | 4.27e-34 | 3 |
frontal cortex | 5.96e-34 | 3 |
gyrus | 9.07e-18 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.37e-99 | 1 |
extraosseous chondrosarcoma | 9.37e-99 | 1 |
myxoid chondrosarcoma | 9.37e-99 | 1 |
extraskeletal myxoid chondrosarcoma | 9.37e-99 | 1 |
connective tissue cancer | 7.67e-18 | 6 |
musculoskeletal system cancer | 7.67e-18 | 6 |