FFCP PHASE1:Hg19::chr20:33814480..33814506,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10893 | |EntrezGene=10893 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7172 | |HGNC=7172 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5R2 | |UniProt=Q9Y5R2 | ||
|association_with_transcript=23bp_to_ENST00000246186_5end | |association_with_transcript=23bp_to_ENST00000246186_5end | ||
|cluster_id=chr20:33814480..33814506,+ | |||
|description=CAGE_peak_1_at_MMP24_5end | |description=CAGE_peak_1_at_MMP24_5end | ||
|id=chr20:33814480..33814506,+ | |id=chr20:33814480..33814506,+ | ||
|ontology_enrichment_celltype=CL:0002322;7.12e-22;5!CL:0000077;2.58e-10;19!CL:0000039;3.13e-10;7!CL:0000586;3.13e-10;7!CL:0000650;3.16e-10;2!CL:1000500;3.16e-10;2!CL:1000618;3.16e-10;2!CL:1001318;3.16e-10;2!CL:0002173;3.16e-10;2!CL:0000540;3.96e-07;6!CL:0000404;3.96e-07;6!CL:0002321;4.22e-07;15 | |ontology_enrichment_celltype=CL:0000077!1.17e-08!19;CL:0000540!6.47e-08!6;CL:0000031!6.47e-08!6;CL:0000404!6.47e-08!6;CL:0000047!1.30e-07!8;CL:0002322!1.93e-07!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0002322;7.12e-22;5!CL:0000077;2.58e-10;19!CL:0000039;3.13e-10;7!CL:0000586;3.13e-10;7!CL:0000650;3.16e-10;2!CL:1000500;3.16e-10;2!CL:1000618;3.16e-10;2!CL:1001318;3.16e-10;2!CL:0002173;3.16e-10;2!CL:0000540;3.96e-07;6!CL:0000404;3.96e-07;6!CL:0002321;4.22e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.40e-22,5;CL:0000039,2.49e-10,7;CL:0000586,2.49e-10,7;CL:0000077,3.30e-10,19;CL:0000650,3.47e-10,2;CL:1000500,3.47e-10,2;CL:1000618,3.47e-10,2;CL:1001318,3.47e-10,2;CL:0002173,3.47e-10,2;CL:0000047,8.11e-09,8;CL:0000540,3.65e-07,6;CL:0000031,3.65e-07,6;CL:0000404,3.65e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.10e-13;3!UBERON:0009117;3.57e-07;10!UBERON:0005564;3.57e-07;10!CL:0000031;3.96e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000922;2.17e-10;49!UBERON:0003567;3.16e-10;2!UBERON:0003838;3.16e-10;2!UBERON:0003586;3.16e-10;2!UBERON:0005169;3.16e-10;2!UBERON:0002321;3.16e-10;2!UBERON:0005215;3.16e-10;2!UBERON:0002303;3.16e-10;2!UBERON:0002319;3.16e-10;2!UBERON:0000473;5.86e-09;8!UBERON:0002037;4.64e-07;6 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.08e-28!94;UBERON:0001016!7.08e-28!94;UBERON:0005743!1.16e-27!86;UBERON:0001017!4.52e-26!82;UBERON:0000955!5.49e-21!69;UBERON:0006238!5.49e-21!69;UBERON:0001049!5.54e-20!57;UBERON:0005068!5.54e-20!57;UBERON:0006241!5.54e-20!57;UBERON:0007135!5.54e-20!57;UBERON:0002780!1.68e-19!41;UBERON:0001890!1.68e-19!41;UBERON:0006240!1.68e-19!41;UBERON:0003075!3.26e-19!86;UBERON:0007284!3.26e-19!86;UBERON:0003080!8.66e-19!42;UBERON:0003056!1.11e-18!61;UBERON:0002616!1.01e-17!59;UBERON:0002346!1.21e-17!90;UBERON:0001869!1.41e-17!32;UBERON:0001893!2.21e-17!34;UBERON:0002791!1.45e-16!33;UBERON:0002619!2.08e-16!22;UBERON:0002020!7.86e-16!34;UBERON:0003528!7.86e-16!34;UBERON:0001950!8.54e-15!20;UBERON:0004121!3.75e-14!169;UBERON:0000956!1.03e-13!25;UBERON:0000203!1.03e-13!25;UBERON:0000924!2.33e-13!173;UBERON:0006601!2.33e-13!173;UBERON:0000033!2.50e-13!123;UBERON:0000153!5.88e-12!129;UBERON:0007811!5.88e-12!129;UBERON:0007023!2.02e-09!115;UBERON:0000064!4.50e-07!219;UBERON:0000025!6.77e-07!194;UBERON:0000200!7.78e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.17e-10;49!UBERON:0003567;3.16e-10;2!UBERON:0003838;3.16e-10;2!UBERON:0003586;3.16e-10;2!UBERON:0005169;3.16e-10;2!UBERON:0002321;3.16e-10;2!UBERON:0005215;3.16e-10;2!UBERON:0002303;3.16e-10;2!UBERON:0002319;3.16e-10;2!UBERON:0000473;5.86e-09;8!UBERON:0002037;4.64e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,3.47e-10,2;UBERON:0003838,3.47e-10,2;UBERON:0003586,3.47e-10,2;UBERON:0005169,3.47e-10,2;UBERON:0002321,3.47e-10,2;UBERON:0005215,3.47e-10,2;UBERON:0002303,3.47e-10,2;UBERON:0002319,3.47e-10,2;UBERON:0000473,4.81e-09,8;UBERON:0001017,3.95e-07,81;UBERON:0002037,4.41e-07,6;UBERON:0006215,4.41e-07,6 | |||
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| ||
|short_description=p1@MMP24 | |short_description=p1@MMP24 | ||
}} | }} |
Latest revision as of 19:26, 15 September 2015
Short description: | p1@MMP24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MMP24_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_ENST00000246186_5end |
EntrezGene: | MMP24 |
HGNC: | 7172 |
UniProt: | Q9Y5R2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.40e-22 | 5 |
germ line cell | 2.49e-10 | 7 |
germ cell | 2.49e-10 | 7 |
mesothelial cell | 3.30e-10 | 19 |
mesangial cell | 3.47e-10 | 2 |
kidney interstitial cell | 3.47e-10 | 2 |
juxtaglomerular complex cell | 3.47e-10 | 2 |
renal interstitial pericyte | 3.47e-10 | 2 |
extraglomerular mesangial cell | 3.47e-10 | 2 |
neuronal stem cell | 8.11e-09 | 8 |
neuron | 3.65e-07 | 6 |
neuroblast | 3.65e-07 | 6 |
electrically signaling cell | 3.65e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 3.47e-10 | 2 |
abdominal segment connective tissue | 3.47e-10 | 2 |
trunk connective tissue | 3.47e-10 | 2 |
interstitial tissue | 3.47e-10 | 2 |
extraglomerular mesangium | 3.47e-10 | 2 |
kidney interstitium | 3.47e-10 | 2 |
juxtaglomerular apparatus | 3.47e-10 | 2 |
mesangium | 3.47e-10 | 2 |
testis | 4.81e-09 | 8 |
central nervous system | 3.95e-07 | 81 |
cerebellum | 4.41e-07 | 6 |
rhombic lip | 4.41e-07 | 6 |