FFCP PHASE1:Hg19::chr1:26231589..26231635,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3925 | |EntrezGene=3925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6510 | |HGNC=6510 | ||
|TSSclassifier=strong | |||
|UniProt=P16949 | |UniProt=P16949 | ||
|association_with_transcript=0bp_to_ENST00000374291_5end | |association_with_transcript=0bp_to_ENST00000374291_5end | ||
|cluster_id=chr1:26231589..26231635,- | |||
|description=CAGE_peak_8_at_STMN1_5end | |description=CAGE_peak_8_at_STMN1_5end | ||
|id=chr1:26231589..26231635,- | |id=chr1:26231589..26231635,- | ||
|ontology_enrichment_celltype=CL:0002319;6.69e-10;25!CL:0002605;7.30e-07;3 | |ontology_enrichment_celltype=CL:0000220!6.86e-07!246;CL:0002321!8.31e-07!248 | ||
| | |ontology_enrichment_celltype_v019=CL:0002319;6.69e-10;25!CL:0002605;7.30e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.79e-10,25;CL:0000133,1.43e-08,59;CL:0000221,2.05e-08,72;CL:0000047,1.43e-07,8;CL:0002605,7.26e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.33e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000956;4.30e-19;25!UBERON:0000203;4.30e-19;25!UBERON:0001893;1.61e-17;34!UBERON:0000073;8.20e-17;53!UBERON:0002616;8.20e-17;53!UBERON:0001869;5.79e-16;32!UBERON:0003528;9.31e-16;34!UBERON:0002020;9.31e-16;34!UBERON:0002791;1.01e-15;32!UBERON:0000955;4.43e-15;68!UBERON:0002619;1.13e-14;22!UBERON:0002780;2.86e-14;41!UBERON:0001890;2.86e-14;41!UBERON:0001950;3.83e-14;20!UBERON:0001017;2.94e-13;75!UBERON:0001016;1.24e-12;83!UBERON:0004732;1.47e-09;13!UBERON:0004733;3.46e-08;12!UBERON:0002028;3.46e-08;12!UBERON:0000488;1.64e-07;4!UBERON:0002298;4.18e-07;6 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.16e-25!82;UBERON:0000073!4.89e-24!94;UBERON:0001016!4.89e-24!94;UBERON:0005743!2.26e-23!86;UBERON:0000955!4.39e-21!69;UBERON:0006238!4.39e-21!69;UBERON:0001049!1.35e-19!57;UBERON:0005068!1.35e-19!57;UBERON:0006241!1.35e-19!57;UBERON:0007135!1.35e-19!57;UBERON:0002616!7.88e-19!59;UBERON:0003075!8.17e-17!86;UBERON:0007284!8.17e-17!86;UBERON:0002346!4.18e-16!90;UBERON:0004121!1.10e-15!169;UBERON:0000924!2.35e-15!173;UBERON:0006601!2.35e-15!173;UBERON:0002780!5.75e-15!41;UBERON:0001890!5.75e-15!41;UBERON:0006240!5.75e-15!41;UBERON:0003080!3.64e-14!42;UBERON:0001893!9.08e-14!34;UBERON:0002020!1.30e-13!34;UBERON:0003528!1.30e-13!34;UBERON:0000033!2.63e-13!123;UBERON:0002791!3.44e-13!33;UBERON:0000153!7.90e-13!129;UBERON:0007811!7.90e-13!129;UBERON:0001869!1.21e-12!32;UBERON:0000956!6.08e-12!25;UBERON:0000203!6.08e-12!25;UBERON:0000025!6.11e-12!194;UBERON:0003056!2.62e-11!61;UBERON:0000119!2.51e-10!312;UBERON:0002619!5.84e-10!22;UBERON:0000483!7.07e-10!309;UBERON:0000477!1.41e-09!286;UBERON:0001950!4.48e-09!20;UBERON:0004111!1.79e-08!241;UBERON:0000475!2.18e-08!365;UBERON:0002049!5.51e-07!79;UBERON:0007798!5.51e-07!79;UBERON:0003076!9.99e-07!15;UBERON:0003057!9.99e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;4.30e-19;25!UBERON:0000203;4.30e-19;25!UBERON:0001893;1.61e-17;34!UBERON:0000073;8.20e-17;53!UBERON:0002616;8.20e-17;53!UBERON:0001869;5.79e-16;32!UBERON:0003528;9.31e-16;34!UBERON:0002020;9.31e-16;34!UBERON:0002791;1.01e-15;32!UBERON:0000955;4.43e-15;68!UBERON:0002619;1.13e-14;22!UBERON:0002780;2.86e-14;41!UBERON:0001890;2.86e-14;41!UBERON:0001950;3.83e-14;20!UBERON:0001017;2.94e-13;75!UBERON:0001016;1.24e-12;83!UBERON:0004732;1.47e-09;13!UBERON:0004733;3.46e-08;12!UBERON:0002028;3.46e-08;12!UBERON:0000488;1.64e-07;4!UBERON:0002298;4.18e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.11e-39,81;UBERON:0001016,1.03e-35,89;UBERON:0000955,1.95e-30,68;UBERON:0006238,1.95e-30,68;UBERON:0001049,5.34e-30,56;UBERON:0005068,5.34e-30,56;UBERON:0006241,5.34e-30,56;UBERON:0007135,5.34e-30,56;UBERON:0003075,9.36e-29,82;UBERON:0007284,9.36e-29,82;UBERON:0000073,6.27e-28,53;UBERON:0002616,6.27e-28,53;UBERON:0002346,8.31e-27,86;UBERON:0010371,8.59e-27,104;UBERON:0004121,8.06e-24,171;UBERON:0000924,8.06e-24,171;UBERON:0006601,8.06e-24,171;UBERON:0003056,1.18e-21,61;UBERON:0002780,5.97e-21,41;UBERON:0001890,5.97e-21,41;UBERON:0003080,5.97e-21,41;UBERON:0006240,5.97e-21,41;UBERON:0010314,6.35e-21,132;UBERON:0001893,5.43e-20,34;UBERON:0000956,3.03e-19,25;UBERON:0000203,3.03e-19,25;UBERON:0003528,3.36e-18,34;UBERON:0002020,3.36e-18,34;UBERON:0002791,1.38e-17,32;UBERON:0001869,1.54e-17,32;UBERON:0002619,8.21e-15,22;UBERON:0001950,2.82e-14,20;UBERON:0011216,2.41e-12,223;UBERON:0000025,1.56e-11,192;UBERON:0003076,3.26e-10,15;UBERON:0003057,3.26e-10,15;UBERON:0000483,5.06e-10,306;UBERON:0000119,9.30e-10,309;UBERON:0004732,1.16e-09,13;UBERON:0004733,3.07e-08,12;UBERON:0002028,3.07e-08,12;UBERON:0007277,3.07e-08,12;UBERON:0000488,8.25e-08,4;UBERON:0007023,2.44e-07,114;UBERON:0002298,3.63e-07,6;UBERON:0004111,4.42e-07,240 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0.491467873003018,0.697801167972428,0,0,0.618831764800233,0.331397375727916,0,0,0.730310090387373,0.487932798790507,2.21617904538218,0,0.313454721478088,3.43483184557268,4.92747930262383,2.38531015230125,0.534893840235659,0.903106483949403,0.865818594450472,0.393364276848904,0,0.154816123316076,0.919421224478927,0,0.739508020333575,0,0.426507697462265,0,0,0,0,0,0,0.257575567634187,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0.167186495390678,0,0,0,1.33692548262208,0.589211814949674,0.443067789167242,0.812411591295047,0.640456598628376,0.390178042679635,1.47994114143309,0.552700035571697,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0.403213486449465,0.534880391567015,0.144824403882799,0,0.670700859703636,0.12786256184353,0,0,0,0,0.486634870302636,2.83604451492204,1.77383517970051,3.16205228495254,0.654895377488563,0,0,0,0,0.26591592103773,0.715471872916026,2.28797964312051,0,0.39752481473341,0,1.04142150482278,0.56530794192401,0.419499436209906,0.275118041940067,1.46296476575767,0.258416759169329,0,0.66944122552934,0.805658634218294,1.52054421143703,0.732186172644509,1.10298924103761,0,0.625098097988558,0.44905874525234,0.337834441449967,1.53316637465883,0.949265659568129,0.916008719652036,0,0,0,0,1.2663051166458,0,0.573673241497627,0,0.560677600142307,0,0,0.311211035399766,0.538842688278752,0.490385709340376,1.21085942115945,0.576175924479999,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.61246251376468,0,0.516628905878827,0,0,0,0.718618141816238,0,0,0.277064115484183,0.438977620880838,1.22595118319608,0.45071417671979,0.680593098960126,0.538168907066586,0.640672166455702,0.635795703478686,0.900273288253207,1.13357782162283,0.257640540045629,0.744467425326359,0,0.389748020644795,0.757301322732344,0.0920498986422993,0.484938170456436,1.06502877754984,1.0075209822764,0.339121184620975,0.773043412653187,0,0.286804595389004,0,0.397589304964456,0,0.414644220061482,0,1.09493207722749,3.12899064659632,0,0,1.39310378409594,3.60939740834793,0.473227200159376,0.168584690078102,0,0.220587945464788,0.217879444092406,0.237270619111097,0.404493924480493,0,0,0,0,0,0,0,0,0,0,0,1.3725424823882,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.811512834825538,1.52631302506568,0.721832238805369,0.925971025153221,0.761016608938393,0,0,0,0.234004265139238,0,0.93733833986777,1.00789276919316,0.708875486211932,0.0895585227028483,0.581267877027924,0,0.985326475791887,0.176096868026452,0.207328115540772,0,0.12624243342638,1.20645999155121,0,2.34434894420094,0,0,0.300343057843917,0.857479297891735,0.336393253036082,0.43596006883328,0.95339771567235,0.517086863031111,0,0,0.797814349754612,1.04007436911366,0.257207374262142,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0.871533458600294,0.499864955910285,0,0,0,0.958499421966331,0,1.42636905040718,0.289562613335158,0.821905290201534,0.358121926479791,0.112085143993527,0,0.215627574859517,0,1.77866236955724,2.60279707715243,1.54657762555539,1.34013012267479,3.18969375826582,0,0,0,0.36807447515742,1.00034104211935,0,0.415941723061614,0.713715955188647,0.630809660135739,0.819989904948992,0,0,0,0.664225598535437,0.368738337083406,0.434418072340414,0.195801157462741,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0.153461973288062,1.12264037773229,0,1.02341449813341,0,0,0.154209693802656,1.06537035187876,0.657017248110473,1.03850885836724,0.348631135379878,0,0.40101294060657,0.0920809889358963,0.229628896329213,0,0,0,0.0770153371044148,0,0,0.316654886678627,1.13733384070897,0.170093705276516,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,1.09883357782012,0.82509499920588,0.574265537996172,0,0,0,0.154048617114644,0.614014698904518,0,0,0.435050081742686,0.255679882248303,0.890320356467374,0.165284915360978,0.384380134730212,0,0,0.929691098594572,0.62962469366128,0.6970372701606,0.616067160352178,0.532306030317022,0.869932992075073,2.03856641014312,1.28812398067792,1.116475108079,0,0.571890581771475,0,0,0,0.78494864019923,0.539617372749944,1.92175920815238,0.589062011728432,0.202182481573316,0,1.26377536871694,0,1.21856744815642,0,0,0.282810863907425,0,1.10273068709225,0,0.876901770507525,0,0,0.202910376962704,0,1.69017361519345,0.143411352204052,0.0982490410131212,1.78335525740625,0.354761064070598,0.633322905892992,0.329294892959902,0,0.349934720244983,0.288666338176536,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,3.84991942105343,0,0.185803175125719,0,0.355709216742071,0.318852545457645,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0.485442086998054,0.111443384277478,0.568272293612826,0,0,0,3.97659059106519,0.703347082052564,0.111308705022906,0,1.26675244876796,0.199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| ||
|short_description=p8@STMN1 | |short_description=p8@STMN1 | ||
}} | }} |
Latest revision as of 04:13, 17 September 2015
Short description: | p8@STMN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_STMN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000374291_5end |
EntrezGene: | STMN1 |
HGNC: | 6510 |
UniProt: | P16949 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.79e-10 | 25 |
neurectodermal cell | 1.43e-08 | 59 |
ectodermal cell | 2.05e-08 | 72 |
neuronal stem cell | 1.43e-07 | 8 |
astrocyte of the cerebral cortex | 7.26e-07 | 3 |