FFCP PHASE1:Hg19::chr19:9964743..9964754,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:9964743..9964754,- | |||
|coexpression_cluster_id=C1245 | |coexpression_cluster_id=C1245 | ||
|description=CAGE_peak_at_chr19:9964743..9964754,- | |description=CAGE_peak_at_chr19:9964743..9964754,- | ||
|id=chr19:9964743..9964754,- | |id=chr19:9964743..9964754,- | ||
|ontology_enrichment_celltype=CL:0000540;5.69e-15;6!CL:0000404;5.69e-15;6!CL:0000136;8.13e-10;13!CL:0002319;7.06e-09;25!CL:0002605;7.18e-08;3 | |ontology_enrichment_celltype=CL:0000540!4.08e-08!6;CL:0000031!4.08e-08!6;CL:0000404!4.08e-08!6;CL:0000136!4.18e-08!15;CL:0000047!7.29e-08!8 | ||
| | |ontology_enrichment_celltype_v019=CL:0000540;5.69e-15;6!CL:0000404;5.69e-15;6!CL:0000136;8.13e-10;13!CL:0002319;7.06e-09;25!CL:0002605;7.18e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.64e-17,8;CL:0000540,8.77e-15,6;CL:0000031,8.77e-15,6;CL:0000404,8.77e-15,6;CL:0002319,9.35e-09,25;CL:0000136,2.04e-08,15;CL:0002605,1.02e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;5.69e-15;6!UBERON:0006215;7.18e-08;3!UBERON:0003099;5.42e-07;1!UBERON:0003852;5.42e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0000956;3.81e-09;25!UBERON:0000203;3.81e-09;25!UBERON:0002791;9.08e-09;32!UBERON:0001869;9.90e-09;32!UBERON:0003528;6.83e-08;34!UBERON:0002020;6.83e-08;34!UBERON:0001893;2.14e-07;34!UBERON:0005705;5.42e-07;1!UBERON:0008193;5.42e-07;1!UBERON:0010912;5.42e-07;1!UBERON:0002514;5.42e-07;1!UBERON:0003457;5.42e-07;1!UBERON:0008907;5.42e-07;1!UBERON:0008001;5.42e-07;1!UBERON:0007213;5.42e-07;1!UBERON:0009891;5.42e-07;1!UBERON:0007914;5.42e-07;1!UBERON:0007375;5.42e-07;1!UBERON:0003323;5.42e-07;1!UBERON:0010258;5.42e-07;1!UBERON:0005253;5.42e-07;1!UBERON:0007842;5.42e-07;1!UBERON:0002397;5.42e-07;1!UBERON:0003113;5.42e-07;1!UBERON:0003277;5.42e-07;1!UBERON:0001709;5.42e-07;1!UBERON:0002244;5.42e-07;1!UBERON:0005620;5.42e-07;1!UBERON:0010364;5.42e-07;1!UBERON:0004288;5.42e-07;1!UBERON:0002780;8.60e-07;41!UBERON:0001890;8.60e-07;41 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:2513,9.48e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.29e-27!82;UBERON:0000073!2.71e-27!94;UBERON:0001016!2.71e-27!94;UBERON:0005743!1.94e-26!86;UBERON:0001049!3.83e-23!57;UBERON:0005068!3.83e-23!57;UBERON:0006241!3.83e-23!57;UBERON:0007135!3.83e-23!57;UBERON:0003080!5.01e-20!42;UBERON:0000955!8.98e-20!69;UBERON:0006238!8.98e-20!69;UBERON:0002346!1.91e-19!90;UBERON:0002616!3.41e-19!59;UBERON:0002780!3.93e-19!41;UBERON:0001890!3.93e-19!41;UBERON:0006240!3.93e-19!41;UBERON:0000924!2.87e-18!173;UBERON:0006601!2.87e-18!173;UBERON:0001869!9.75e-17!32;UBERON:0001893!1.45e-16!34;UBERON:0003075!1.83e-16!86;UBERON:0007284!1.83e-16!86;UBERON:0004121!7.24e-16!169;UBERON:0002791!7.96e-16!33;UBERON:0002020!1.84e-15!34;UBERON:0003528!1.84e-15!34;UBERON:0007023!1.84e-13!115;UBERON:0000956!2.31e-13!25;UBERON:0000203!2.31e-13!25;UBERON:0003056!3.98e-13!61;UBERON:0000153!1.99e-11!129;UBERON:0007811!1.99e-11!129;UBERON:0002619!8.85e-11!22;UBERON:0000033!2.26e-10!123;UBERON:0001950!5.04e-09!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;3.81e-09;25!UBERON:0000203;3.81e-09;25!UBERON:0002791;9.08e-09;32!UBERON:0001869;9.90e-09;32!UBERON:0003528;6.83e-08;34!UBERON:0002020;6.83e-08;34!UBERON:0001893;2.14e-07;34!UBERON:0005705;5.42e-07;1!UBERON:0008193;5.42e-07;1!UBERON:0010912;5.42e-07;1!UBERON:0002514;5.42e-07;1!UBERON:0003457;5.42e-07;1!UBERON:0008907;5.42e-07;1!UBERON:0008001;5.42e-07;1!UBERON:0007213;5.42e-07;1!UBERON:0009891;5.42e-07;1!UBERON:0007914;5.42e-07;1!UBERON:0007375;5.42e-07;1!UBERON:0003323;5.42e-07;1!UBERON:0010258;5.42e-07;1!UBERON:0005253;5.42e-07;1!UBERON:0007842;5.42e-07;1!UBERON:0002397;5.42e-07;1!UBERON:0003113;5.42e-07;1!UBERON:0003277;5.42e-07;1!UBERON:0001709;5.42e-07;1!UBERON:0002244;5.42e-07;1!UBERON:0005620;5.42e-07;1!UBERON:0010364;5.42e-07;1!UBERON:0004288;5.42e-07;1!UBERON:0002780;8.60e-07;41!UBERON:0001890;8.60e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.57e-15,81;UBERON:0001016,9.48e-15,89;UBERON:0005253,8.06e-12,2;UBERON:0000073,9.13e-10,53;UBERON:0002616,9.13e-10,53;UBERON:0001049,3.83e-09,56;UBERON:0005068,3.83e-09,56;UBERON:0006241,3.83e-09,56;UBERON:0007135,3.83e-09,56;UBERON:0000956,4.24e-09,25;UBERON:0000203,4.24e-09,25;UBERON:0002791,4.53e-09,32;UBERON:0001869,4.53e-09,32;UBERON:0004121,6.42e-09,171;UBERON:0000924,6.42e-09,171;UBERON:0006601,6.42e-09,171;UBERON:0002780,9.83e-09,41;UBERON:0001890,9.83e-09,41;UBERON:0003080,9.83e-09,41;UBERON:0006240,9.83e-09,41;UBERON:0000955,1.43e-08,68;UBERON:0006238,1.43e-08,68;UBERON:0003528,1.75e-08,34;UBERON:0002020,1.75e-08,34;UBERON:0001893,1.75e-08,34;UBERON:0002346,9.92e-08,86;UBERON:0005705,5.43e-07,1;UBERON:0008193,5.43e-07,1;UBERON:0010912,5.43e-07,1;UBERON:0002514,5.43e-07,1;UBERON:0003457,5.43e-07,1;UBERON:0008907,5.43e-07,1;UBERON:0008001,5.43e-07,1;UBERON:0007213,5.43e-07,1;UBERON:0009891,5.43e-07,1;UBERON:0007914,5.43e-07,1;UBERON:0009292,5.43e-07,1;UBERON:0003099,5.43e-07,1;UBERON:0007375,5.43e-07,1;UBERON:0003323,5.43e-07,1;UBERON:0010258,5.43e-07,1;UBERON:0007842,5.43e-07,1;UBERON:0009494,5.43e-07,1;UBERON:0010042,5.43e-07,1;UBERON:0010045,5.43e-07,1;UBERON:0010259,5.43e-07,1;UBERON:0010359,5.43e-07,1;UBERON:0009526,5.43e-07,1;UBERON:0002397,5.43e-07,1;UBERON:0003113,5.43e-07,1;UBERON:0003277,5.43e-07,1;UBERON:0001709,5.43e-07,1;UBERON:0004066,5.43e-07,1;UBERON:0002244,5.43e-07,1;UBERON:0005620,5.43e-07,1;UBERON:0004362,5.43e-07,1;UBERON:0010364,5.43e-07,1;UBERON:0010046,5.43e-07,1;UBERON:0005868,5.43e-07,1;UBERON:0007238,5.43e-07,1;UBERON:0004288,5.43e-07,1;UBERON:0004068,5.43e-07,1;UBERON:0010334,5.43e-07,1;UBERON:0003852,5.43e-07,1;UBERON:0010253,5.43e-07,1;UBERON:0003075,7.28e-07,82;UBERON:0007284,7.28e-07,82 | |||
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| ||
|short_description=p@chr19:9964743..9964754,- | |short_description=p@chr19:9964743..9964754,- | ||
}} | }} |
Latest revision as of 18:50, 27 July 2015
Short description: | p@chr19:9964743..9964754, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:9964743..9964754, - |
Coexpression cluster: | C1245_normal_Neurons_parietal_temporal_neuroectodermal_occipital_basal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.64e-17 | 8 |
neuron | 8.77e-15 | 6 |
neuroblast | 8.77e-15 | 6 |
electrically signaling cell | 8.77e-15 | 6 |
neural cell | 9.35e-09 | 25 |
fat cell | 2.04e-08 | 15 |
astrocyte of the cerebral cortex | 1.02e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 9.48e-07 | 1 |