FFCP PHASE1:Hg19::chr10:129714610..129714615,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:129714610..129714615,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr10:129714610..129714615,+ | |description=CAGE_peak_at_chr10:129714610..129714615,+ | ||
|id=chr10:129714610..129714615,+ | |id=chr10:129714610..129714615,+ | ||
|ontology_enrichment_celltype=CL:0000860;4.28e-40;33!CL:0002057;4.28e-40;33!CL:0000473;1.34e-30;39!CL:0000234;1.34e-30;39!CL:0000576;7.03e-21;48!CL:0000766;2.12e-16;69!CL:0002087;1.23e-07;104 | |ontology_enrichment_celltype=CL:0002057!1.24e-66!42;CL:0000860!8.97e-62!45;CL:0000766!1.53e-45!76;CL:0002194!1.43e-41!63;CL:0000576!1.43e-41!63;CL:0000040!1.43e-41!63;CL:0000559!1.43e-41!63;CL:0002009!4.04e-40!65;CL:0000839!7.14e-40!70;CL:0000557!3.14e-39!71;CL:0000763!8.45e-29!112;CL:0000049!8.45e-29!112;CL:0000738!2.23e-23!140;CL:0002087!5.90e-21!119;CL:0002031!7.19e-20!124;CL:0000037!9.81e-18!172;CL:0000566!9.81e-18!172;CL:0002032!2.22e-17!165;CL:0000837!2.22e-17!165;CL:0000988!2.23e-16!182;CL:0000767!1.14e-13!3;CL:0000134!8.83e-10!358;CL:0002320!1.95e-09!365;CL:0000219!3.15e-08!390;CL:0002393!5.65e-08!9;CL:0002397!5.65e-08!9;CL:0000034!5.70e-07!444;CL:0000048!8.73e-07!430 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;4.28e-40;33!CL:0002057;4.28e-40;33!CL:0000473;1.34e-30;39!CL:0000234;1.34e-30;39!CL:0000576;7.03e-21;48!CL:0000766;2.12e-16;69!CL:0002087;1.23e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.68e-42,42;CL:0002057,4.68e-42,42;CL:0000473,9.42e-37,48;CL:0000234,9.42e-37,48;CL:0002194,2.56e-29,59;CL:0000576,2.56e-29,59;CL:0000040,2.56e-29,59;CL:0000559,2.56e-29,59;CL:0002009,2.34e-28,61;CL:0000839,3.31e-26,66;CL:0000557,8.18e-26,67;CL:0000766,5.18e-24,72;CL:0000763,6.72e-16,108;CL:0000049,6.72e-16,108;CL:0002087,6.66e-15,115;CL:0002031,2.92e-14,120;CL:0000738,1.61e-12,136;CL:0002032,1.76e-10,161;CL:0000837,1.76e-10,161;CL:0000037,5.12e-10,168;CL:0000988,1.79e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.98e-29;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.75e-34!80;UBERON:0001474!2.37e-31!86;UBERON:0002390!1.41e-27!102;UBERON:0003061!1.41e-27!102;UBERON:0004765!8.56e-26!101;UBERON:0001434!8.56e-26!101;UBERON:0002193!1.49e-24!112;UBERON:0002405!9.46e-24!115;UBERON:0002204!3.60e-13!167;UBERON:0003081!1.09e-09!216;UBERON:0002384!5.73e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.72e-23,76;UBERON:0001474,4.67e-21,82;UBERON:0004765,3.70e-19,90;UBERON:0002405,1.57e-18,93;UBERON:0002390,1.45e-17,98;UBERON:0003061,1.45e-17,98;UBERON:0001434,3.32e-17,100;UBERON:0002193,6.72e-16,108;UBERON:0002204,4.42e-10,167;UBERON:0003081,3.62e-08,203 | |||
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|short_description=p@chr10:129714610..129714615,+ | |short_description=p@chr10:129714610..129714615,+ | ||
}} | }} |
Latest revision as of 11:36, 23 July 2015
Short description: | p@chr10:129714610..129714615, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:129714610..129714615, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.68e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.68e-42 | 42 |
defensive cell | 9.42e-37 | 48 |
phagocyte | 9.42e-37 | 48 |
monopoietic cell | 2.56e-29 | 59 |
monocyte | 2.56e-29 | 59 |
monoblast | 2.56e-29 | 59 |
promonocyte | 2.56e-29 | 59 |
macrophage dendritic cell progenitor | 2.34e-28 | 61 |
myeloid lineage restricted progenitor cell | 3.31e-26 | 66 |
granulocyte monocyte progenitor cell | 8.18e-26 | 67 |
myeloid leukocyte | 5.18e-24 | 72 |
myeloid cell | 6.72e-16 | 108 |
common myeloid progenitor | 6.72e-16 | 108 |
nongranular leukocyte | 6.66e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 2.92e-14 | 120 |
leukocyte | 1.61e-12 | 136 |
hematopoietic oligopotent progenitor cell | 1.76e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.76e-10 | 161 |
hematopoietic stem cell | 5.12e-10 | 168 |
hematopoietic cell | 1.79e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.72e-23 | 76 |
bone element | 4.67e-21 | 82 |
skeletal element | 3.70e-19 | 90 |
immune system | 1.57e-18 | 93 |
hematopoietic system | 1.45e-17 | 98 |
blood island | 1.45e-17 | 98 |
skeletal system | 3.32e-17 | 100 |
hemolymphoid system | 6.72e-16 | 108 |
musculoskeletal system | 4.42e-10 | 167 |
lateral plate mesoderm | 3.62e-08 | 203 |