FFCP PHASE1:Hg19::chr2:190448118..190448135,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30061 | |EntrezGene=30061 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10909 | |HGNC=10909 | ||
|TSSclassifier=strong | |||
|UniProt=Q4PNE6 | |UniProt=Q4PNE6 | ||
|association_with_transcript=0bp_to_ENST00000440626_5end | |association_with_transcript=0bp_to_ENST00000440626_5end | ||
|cluster_id=chr2:190448118..190448135,- | |||
|coexpression_cluster_id=C212 | |coexpression_cluster_id=C212 | ||
|description=CAGE_peak_4_at_SLC40A1_5end | |description=CAGE_peak_4_at_SLC40A1_5end | ||
|id=chr2:190448118..190448135,- | |id=chr2:190448118..190448135,- | ||
|ontology_enrichment_celltype=CL:0000764;8.55e-23;2!CL:0000558;8.55e-23;2 | |ontology_enrichment_celltype=CL:0000764!2.06e-13!2;CL:0000765!2.06e-13!2;CL:0000050!2.06e-13!2;CL:0000038!2.06e-13!2;CL:0000558!2.06e-13!2;CL:0000547!2.06e-13!2;CL:0000549!2.06e-13!2;CL:0000550!2.06e-13!2;CL:0000552!2.06e-13!2;CL:0000763!5.68e-08!112;CL:0000049!5.68e-08!112;CL:0001024!2.07e-07!1 | ||
| | |ontology_enrichment_celltype_v019=CL:0000764;8.55e-23;2!CL:0000558;8.55e-23;2 | ||
|ontology_enrichment_disease=DOID:1036;5.51e-49;8!DOID:8692;1.36e-33;31!DOID:1240;2.05e-21;39!DOID:2531;3.49e-14;51!DOID:0060083;3.49e-14;51!DOID:8552;7.88e-13;1 | |ontology_enrichment_celltype_v019_2=CL:0000764,1.07e-22,2;CL:0000765,1.07e-22,2;CL:0000050,1.07e-22,2;CL:0000038,1.07e-22,2;CL:0000558,1.07e-22,2;CL:0000547,1.07e-22,2;CL:0000549,1.07e-22,2;CL:0000550,1.07e-22,2;CL:0000552,1.07e-22,2;CL:0000763,5.89e-13,108;CL:0000049,5.89e-13,108;CL:0002032,3.77e-08,161;CL:0000837,3.77e-08,161;CL:0000037,9.72e-08,168;CL:0000988,2.94e-07,177 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1036!8.62e-28!8;DOID:8692!1.20e-18!31;DOID:1240!1.89e-14!39;DOID:2531!1.26e-10!51;DOID:0060083!1.26e-10!51;DOID:8552!7.03e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:1036;5.51e-49;8!DOID:8692;1.36e-33;31!DOID:1240;2.05e-21;39!DOID:2531;3.49e-14;51!DOID:0060083;3.49e-14;51!DOID:8552;7.88e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.07e-49,8;DOID:8692,1.79e-34,31;DOID:1240,3.70e-27,39;DOID:2531,1.77e-20,51;DOID:0060083,1.77e-20,51;DOID:8552,7.89e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.05e-08!3;UBERON:0004854!1.05e-08!3;UBERON:0009034!1.05e-08!3;UBERON:0002095!1.05e-08!3;UBERON:0004782!1.05e-08!3;UBERON:0003281!1.05e-08!3;UBERON:0009664!1.05e-08!3;UBERON:0002296!1.05e-08!3;UBERON:0005602!1.05e-08!3;UBERON:0001179!1.05e-08!3;UBERON:0006293!1.05e-08!3;UBERON:0002171!2.50e-07!1;UBERON:0006518!2.50e-07!1;UBERON:0008949!2.50e-07!1;UBERON:0000101!2.50e-07!1;UBERON:0002167!2.50e-07!1;UBERON:0002146!3.40e-07!1;UBERON:0005623!3.40e-07!1;UBERON:0002363!4.61e-07!1;UBERON:0007647!4.61e-07!1;UBERON:0010115!4.61e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p4@SLC40A1 | |short_description=p4@SLC40A1 | ||
}} | }} |
Latest revision as of 02:16, 19 September 2015
Short description: | p4@SLC40A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC40A1_5end |
Coexpression cluster: | C212_chronic_acute_Whole_Reticulocytes_leukemia_blood_CD34 |
Association with transcript: | 0bp_to_ENST00000440626_5end |
EntrezGene: | SLC40A1 |
HGNC: | 10909 |
UniProt: | Q4PNE6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.07e-22 | 2 |
erythroblast | 1.07e-22 | 2 |
megakaryocyte-erythroid progenitor cell | 1.07e-22 | 2 |
erythroid progenitor cell | 1.07e-22 | 2 |
reticulocyte | 1.07e-22 | 2 |
proerythroblast | 1.07e-22 | 2 |
basophilic erythroblast | 1.07e-22 | 2 |
polychromatophilic erythroblast | 1.07e-22 | 2 |
orthochromatic erythroblast | 1.07e-22 | 2 |
myeloid cell | 5.89e-13 | 108 |
common myeloid progenitor | 5.89e-13 | 108 |
hematopoietic oligopotent progenitor cell | 3.77e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.77e-08 | 161 |
hematopoietic stem cell | 9.72e-08 | 168 |
hematopoietic cell | 2.94e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.07e-49 | 8 |
myeloid leukemia | 1.79e-34 | 31 |
leukemia | 3.70e-27 | 39 |
hematologic cancer | 1.77e-20 | 51 |
immune system cancer | 1.77e-20 | 51 |
chronic myeloid leukemia | 7.89e-13 | 1 |