FFCP PHASE1:Hg19::chr10:1115346..1115349,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:1115346..1115349,+ | |||
|description=CAGE_peak_at_chr10:1115346..1115349,+ | |description=CAGE_peak_at_chr10:1115346..1115349,+ | ||
|id=chr10:1115346..1115349,+ | |id=chr10:1115346..1115349,+ | ||
|ontology_enrichment_celltype=CL:0000840;2.09e-10;5!CL:0001014;2.07e-08;2!CL:0001016;2.07e-08;2!CL:0002535;2.07e-08;2!CL:0000990;3.14e-07;8 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000840;2.09e-10;5!CL:0001014;2.07e-08;2!CL:0001016;2.07e-08;2!CL:0002535;2.07e-08;2!CL:0000990;3.14e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000840,2.52e-10,5;CL:0001029,2.52e-10,5;CL:0001014,2.00e-08,2;CL:0001016,2.00e-08,2;CL:0002535,3.08e-08,2;CL:0000990,3.55e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0010227;5.98e-16;1!UBERON:0005425;1.66e-15;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002079;5.98e-16;1!UBERON:0000941;1.66e-15;1!UBERON:0001785;1.66e-15;1!UBERON:0002464;1.66e-15;1!UBERON:0004904;1.66e-15;1!UBERON:0001021;1.66e-15;1!UBERON:0001872;2.66e-12;5!UBERON:0001950;4.38e-11;20!UBERON:0002619;3.82e-10;22!UBERON:0000956;5.29e-09;25!UBERON:0000203;5.29e-09;25!UBERON:0002081;1.24e-08;2!UBERON:0003714;2.07e-08;2!UBERON:0002702;2.07e-08;2!UBERON:0005162;2.07e-08;2!UBERON:0000122;2.07e-08;2!UBERON:0006955;2.07e-08;2!UBERON:0004801;2.07e-08;2!UBERON:0003528;3.18e-07;34!UBERON:0002020;3.18e-07;34!UBERON:0001869;3.18e-07;32 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;5.98e-16;1!UBERON:0000941;1.66e-15;1!UBERON:0001785;1.66e-15;1!UBERON:0002464;1.66e-15;1!UBERON:0004904;1.66e-15;1!UBERON:0001021;1.66e-15;1!UBERON:0001872;2.66e-12;5!UBERON:0001950;4.38e-11;20!UBERON:0002619;3.82e-10;22!UBERON:0000956;5.29e-09;25!UBERON:0000203;5.29e-09;25!UBERON:0002081;1.24e-08;2!UBERON:0003714;2.07e-08;2!UBERON:0002702;2.07e-08;2!UBERON:0005162;2.07e-08;2!UBERON:0000122;2.07e-08;2!UBERON:0006955;2.07e-08;2!UBERON:0004801;2.07e-08;2!UBERON:0003528;3.18e-07;34!UBERON:0002020;3.18e-07;34!UBERON:0001869;3.18e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,6.44e-16,1;UBERON:0000941,2.06e-15,1;UBERON:0001785,2.06e-15,1;UBERON:0002464,2.06e-15,1;UBERON:0004904,2.06e-15,1;UBERON:0001021,2.06e-15,1;UBERON:0003902,2.06e-15,1;UBERON:0005425,2.06e-15,1;UBERON:0001872,2.12e-12,5;UBERON:0001950,3.84e-11,20;UBERON:0002619,3.39e-10,22;UBERON:0000956,4.77e-09,25;UBERON:0000203,4.77e-09,25;UBERON:0002081,1.29e-08,2;UBERON:0010227,1.29e-08,2;UBERON:0002702,1.50e-08,2;UBERON:0003714,2.31e-08,2;UBERON:0005162,2.31e-08,2;UBERON:0000122,2.31e-08,2;UBERON:0006955,3.08e-08,2;UBERON:0004801,3.08e-08,2;UBERON:0002791,3.57e-07,32;UBERON:0001869,3.57e-07,32;UBERON:0003528,8.94e-07,34;UBERON:0002020,8.94e-07,34;UBERON:0001893,8.94e-07,34 | |||
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| ||
|short_description=p@chr10:1115346..1115349,+ | |short_description=p@chr10:1115346..1115349,+ | ||
}} | }} |
Latest revision as of 10:16, 23 July 2015
Short description: | p@chr10:1115346..1115349, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:1115346..1115349, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 2.52e-10 | 5 |
common dendritic progenitor | 2.52e-10 | 5 |
CD1a-positive Langerhans cell | 2.00e-08 | 2 |
immature CD1a-positive Langerhans cell | 2.00e-08 | 2 |
epithelial cell of cervix | 3.08e-08 | 2 |
conventional dendritic cell | 3.55e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 6.44e-16 | 1 |
cranial nerve II | 2.06e-15 | 1 |
cranial nerve | 2.06e-15 | 1 |
nerve trunk | 2.06e-15 | 1 |
nerve connecting eye with brain | 2.06e-15 | 1 |
nerve | 2.06e-15 | 1 |
retinal neural layer | 2.06e-15 | 1 |
presumptive neural retina | 2.06e-15 | 1 |
parietal lobe | 2.12e-12 | 5 |
neocortex | 3.84e-11 | 20 |
regional part of cerebral cortex | 3.39e-10 | 22 |
cerebral cortex | 4.77e-09 | 25 |
pallium | 4.77e-09 | 25 |
cardiac atrium | 1.29e-08 | 2 |
future cardiac atrium | 1.29e-08 | 2 |
middle frontal gyrus | 1.50e-08 | 2 |
neural tissue | 2.31e-08 | 2 |
multi cell component structure | 2.31e-08 | 2 |
neuron projection bundle | 2.31e-08 | 2 |
uterine epithelium | 3.08e-08 | 2 |
cervix epithelium | 3.08e-08 | 2 |
regional part of telencephalon | 3.57e-07 | 32 |
cerebral hemisphere | 3.57e-07 | 32 |
brain grey matter | 8.94e-07 | 34 |
gray matter | 8.94e-07 | 34 |
telencephalon | 8.94e-07 | 34 |