FFCP PHASE1:Hg19::chr10:135044466..135044478,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:135044466..135044478,+ | |||
|coexpression_cluster_id=C128 | |coexpression_cluster_id=C128 | ||
|description=CAGE_peak_at_chr10:135044466..135044478,+ | |description=CAGE_peak_at_chr10:135044466..135044478,+ | ||
|id=chr10:135044466..135044478,+ | |id=chr10:135044466..135044478,+ | ||
|ontology_enrichment_celltype=CL:0000039;7.42e-65;7!CL:0000586;7.42e-65;7!CL:0002322;7.02e-51;5!CL:0002321;1.42e-17;15!CL:0000148;2.98e-12;10!CL:0000147;4.95e-09;14 | |ontology_enrichment_celltype=CL:0002322!1.63e-50!5;CL:0000039!7.95e-24!7;CL:0000586!7.95e-24!7;CL:0000148!9.56e-10!10;CL:0000541!9.56e-10!10;CL:0000540!1.47e-07!6;CL:0000031!1.47e-07!6;CL:0000404!1.47e-07!6;CL:0000147!4.25e-07!14 | ||
| | |ontology_enrichment_celltype_v019=CL:0000039;7.42e-65;7!CL:0000586;7.42e-65;7!CL:0002322;7.02e-51;5!CL:0002321;1.42e-17;15!CL:0000148;2.98e-12;10!CL:0000147;4.95e-09;14 | ||
|ontology_enrichment_disease=DOID:3095;3.85e-21;22!DOID:2994;3.85e-21;22 | |ontology_enrichment_celltype_v019_2=CL:0000039,8.06e-65,7;CL:0000586,8.06e-65,7;CL:0002322,6.45e-51,5;CL:0000148,2.98e-12,10;CL:0000541,2.98e-12,10;CL:0000147,4.95e-09,14 | ||
|ontology_enrichment_uberon=UBERON:0000473;7.38e-57;8!UBERON:0003135;1.41e-41;11!UBERON:0000991;4.06e-22;21!UBERON:0000922;7.35e-22;49!UBERON:0003101;3.85e-21;22!UBERON:0000079;3.85e-21;22!UBERON:0002323;5.28e-10;45!UBERON:0003133;2.92e-08;44 | |ontology_enrichment_development_v019=UBERON:0009117;1.18e-45;10!UBERON:0005564;1.18e-45;10 | ||
|ontology_enrichment_disease=DOID:3095!1.65e-11!22;DOID:2994!1.65e-11!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.85e-21;22!DOID:2994;3.85e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.95e-21,22;DOID:2994,3.95e-21,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!3.27e-45!8;UBERON:0003135!8.06e-33!11;UBERON:0000991!7.97e-23!21;UBERON:0009196!7.97e-23!21;UBERON:0009117!7.97e-23!21;UBERON:0005564!7.97e-23!21;UBERON:0004176!9.25e-22!22;UBERON:0003101!3.00e-16!22;UBERON:0000079!3.00e-16!22;UBERON:0002323!4.65e-10!46;UBERON:0003133!1.31e-09!48;UBERON:0004458!2.12e-09!49;UBERON:0005156!1.10e-07!59;UBERON:0000990!1.10e-07!59;UBERON:0003886!3.77e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.38e-57;8!UBERON:0003135;1.41e-41;11!UBERON:0000991;4.06e-22;21!UBERON:0000922;7.35e-22;49!UBERON:0003101;3.85e-21;22!UBERON:0000079;3.85e-21;22!UBERON:0002323;5.28e-10;45!UBERON:0003133;2.92e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.93e-57,8;UBERON:0003135,1.49e-41,11;UBERON:0000991,4.18e-22,21;UBERON:0009196,4.18e-22,21;UBERON:0009117,4.18e-22,21;UBERON:0005564,4.18e-22,21;UBERON:0004176,3.95e-21,22;UBERON:0003101,3.95e-21,22;UBERON:0000079,3.95e-21,22;UBERON:0002323,2.16e-10,46;UBERON:0003133,5.61e-10,48;UBERON:0004458,8.77e-10,49;UBERON:0003886,6.41e-09,54;UBERON:0005156,3.36e-08,59;UBERON:0000990,3.36e-08,59;UBERON:0002553,6.05e-08,61 | |||
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|short_description=p@chr10:135044466..135044478,+ | |short_description=p@chr10:135044466..135044478,+ | ||
}} | }} |
Latest revision as of 11:50, 23 July 2015
Short description: | p@chr10:135044466..135044478, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:135044466..135044478, + |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.06e-65 | 7 |
germ cell | 8.06e-65 | 7 |
embryonic stem cell | 6.45e-51 | 5 |
melanocyte | 2.98e-12 | 10 |
melanoblast | 2.98e-12 | 10 |
pigment cell | 4.95e-09 | 14 |
Ontology term | p-value | n |
---|---|---|
testis | 7.93e-57 | 8 |
male reproductive organ | 1.49e-41 | 11 |
gonad | 4.18e-22 | 21 |
indifferent external genitalia | 4.18e-22 | 21 |
indifferent gonad | 4.18e-22 | 21 |
gonad primordium | 4.18e-22 | 21 |
external genitalia | 3.95e-21 | 22 |
male organism | 3.95e-21 | 22 |
male reproductive system | 3.95e-21 | 22 |
body cavity | 2.16e-10 | 46 |
reproductive organ | 5.61e-10 | 48 |
body cavity or lining | 8.77e-10 | 49 |
body cavity precursor | 6.41e-09 | 54 |
reproductive structure | 3.36e-08 | 59 |
reproductive system | 3.36e-08 | 59 |
anatomical cavity | 6.05e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.95e-21 | 22 |
germ cell cancer | 3.95e-21 | 22 |