FFCP PHASE1:Hg19::chr4:16900219..16900230,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9079 | |EntrezGene=9079 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6533 | |HGNC=6533 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000441778_5end | |association_with_transcript=-2bp_to_ENST00000441778_5end | ||
|cluster_id=chr4:16900219..16900230,- | |||
|coexpression_cluster_id=C1083 | |coexpression_cluster_id=C1083 | ||
|description=CAGE_peak_5_at_LDB2_5end | |description=CAGE_peak_5_at_LDB2_5end | ||
|id=chr4:16900219..16900230,- | |id=chr4:16900219..16900230,- | ||
|ontology_enrichment_celltype=CL:0002139;6.27e-19;24!CL:0000115;9.48e-15;36!CL:0000071;7.45e-13;18!CL:0002078;1.67e-08;45!CL:0002138;6.96e-08;6!CL:0002543;1.82e-07;6 | |ontology_enrichment_celltype=CL:0002139!3.41e-13!24;CL:0000115!4.42e-11!35;CL:0000071!5.08e-09!18;CL:0002546!5.08e-09!18;CL:0002078!7.18e-08!44 | ||
| | |ontology_enrichment_celltype_v019=CL:0002139;6.27e-19;24!CL:0000115;9.48e-15;36!CL:0000071;7.45e-13;18!CL:0002078;1.67e-08;45!CL:0002138;6.96e-08;6!CL:0002543;1.82e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.01e-19,24;CL:0000115,4.37e-18,36;CL:0000071,6.05e-13,18;CL:0002546,6.05e-13,18;CL:0002078,1.38e-12,45;CL:0000213,1.40e-08,58;CL:0000215,1.40e-08,58;CL:0005020,6.95e-08,6;CL:0002138,6.95e-08,6;CL:0005022,6.95e-08,6;CL:0002543,1.94e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;7.45e-13;18!CL:0005022;6.96e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001869;9.09e-22;32!UBERON:0002619;4.70e-21;22!UBERON:0002791;4.31e-20;32!UBERON:0001950;1.23e-19;20!UBERON:0001893;2.71e-19;34!UBERON:0000956;3.00e-19;25!UBERON:0000203;3.00e-19;25!UBERON:0003528;2.33e-18;34!UBERON:0002020;2.33e-18;34!UBERON:0002780;5.60e-15;41!UBERON:0001890;5.60e-15;41!UBERON:0004638;7.45e-13;18!UBERON:0001986;7.45e-13;18!UBERON:0004852;7.45e-13;18!UBERON:0000487;7.93e-11;22!UBERON:0006914;6.47e-09;25!UBERON:0000922;1.10e-08;49!UBERON:0000200;2.12e-08;6!UBERON:0000073;8.08e-08;53!UBERON:0002616;8.08e-08;53!UBERON:0002021;1.75e-07;5!UBERON:0000955;2.27e-07;68!UBERON:0001872;2.34e-07;5!UBERON:0001017;4.49e-07;75!UBERON:0007023;6.14e-07;114 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.57e-32!115;UBERON:0003080!2.14e-24!42;UBERON:0002780!7.15e-24!41;UBERON:0001890!7.15e-24!41;UBERON:0006240!7.15e-24!41;UBERON:0001017!1.92e-22!82;UBERON:0005743!6.93e-22!86;UBERON:0001893!7.69e-22!34;UBERON:0001869!8.06e-22!32;UBERON:0001049!2.47e-21!57;UBERON:0005068!2.47e-21!57;UBERON:0006241!2.47e-21!57;UBERON:0007135!2.47e-21!57;UBERON:0002791!5.22e-21!33;UBERON:0002020!6.26e-21!34;UBERON:0003528!6.26e-21!34;UBERON:0000073!8.25e-21!94;UBERON:0001016!8.25e-21!94;UBERON:0002346!1.16e-18!90;UBERON:0000955!9.75e-18!69;UBERON:0006238!9.75e-18!69;UBERON:0002616!1.29e-17!59;UBERON:0000956!2.51e-17!25;UBERON:0000203!2.51e-17!25;UBERON:0002619!3.34e-17!22;UBERON:0003075!1.99e-16!86;UBERON:0007284!1.99e-16!86;UBERON:0001950!3.29e-16!20;UBERON:0004111!1.23e-15!241;UBERON:0003056!1.25e-15!61;UBERON:0000477!2.84e-14!286;UBERON:0000025!8.55e-14!194;UBERON:0000153!4.09e-12!129;UBERON:0007811!4.09e-12!129;UBERON:0000924!7.73e-12!173;UBERON:0006601!7.73e-12!173;UBERON:0000033!1.39e-11!123;UBERON:0004121!2.53e-10!169;UBERON:0000468!1.55e-09!659;UBERON:0001986!5.08e-09!18;UBERON:0004638!5.08e-09!18;UBERON:0004852!5.08e-09!18;UBERON:0000119!1.29e-07!312;UBERON:0000483!1.44e-07!309;UBERON:0000467!1.71e-07!625;UBERON:0000480!2.24e-07!626;UBERON:0000487!3.22e-07!22;UBERON:0006914!4.97e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.09e-22;32!UBERON:0002619;4.70e-21;22!UBERON:0002791;4.31e-20;32!UBERON:0001950;1.23e-19;20!UBERON:0001893;2.71e-19;34!UBERON:0000956;3.00e-19;25!UBERON:0000203;3.00e-19;25!UBERON:0003528;2.33e-18;34!UBERON:0002020;2.33e-18;34!UBERON:0002780;5.60e-15;41!UBERON:0001890;5.60e-15;41!UBERON:0004638;7.45e-13;18!UBERON:0001986;7.45e-13;18!UBERON:0004852;7.45e-13;18!UBERON:0000487;7.93e-11;22!UBERON:0006914;6.47e-09;25!UBERON:0000922;1.10e-08;49!UBERON:0000200;2.12e-08;6!UBERON:0000073;8.08e-08;53!UBERON:0002616;8.08e-08;53!UBERON:0002021;1.75e-07;5!UBERON:0000955;2.27e-07;68!UBERON:0001872;2.34e-07;5!UBERON:0001017;4.49e-07;75!UBERON:0007023;6.14e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.99e-24,32;UBERON:0007023,6.75e-23,114;UBERON:0001893,3.06e-22,34;UBERON:0002791,4.46e-22,32;UBERON:0002780,4.16e-21,41;UBERON:0001890,4.16e-21,41;UBERON:0003080,4.16e-21,41;UBERON:0006240,4.16e-21,41;UBERON:0002619,6.26e-21,22;UBERON:0003528,3.19e-20,34;UBERON:0002020,3.19e-20,34;UBERON:0001950,1.84e-19,20;UBERON:0000956,4.76e-19,25;UBERON:0000203,4.76e-19,25;UBERON:0001017,2.99e-16,81;UBERON:0001016,6.66e-16,89;UBERON:0001049,1.70e-14,56;UBERON:0005068,1.70e-14,56;UBERON:0006241,1.70e-14,56;UBERON:0007135,1.70e-14,56;UBERON:0000073,6.21e-14,53;UBERON:0002616,6.21e-14,53;UBERON:0004111,9.02e-14,240;UBERON:0000025,4.20e-13,192;UBERON:0004638,6.05e-13,18;UBERON:0001986,6.05e-13,18;UBERON:0004852,6.05e-13,18;UBERON:0002346,1.80e-12,86;UBERON:0000955,6.97e-12,68;UBERON:0006238,6.97e-12,68;UBERON:0003056,1.01e-11,61;UBERON:0000487,5.94e-11,22;UBERON:0003075,4.10e-10,82;UBERON:0007284,4.10e-10,82;UBERON:0006914,5.07e-09,25;UBERON:0011216,6.01e-09,223;UBERON:0000200,2.17e-08,6;UBERON:0004121,2.53e-08,171;UBERON:0000924,2.53e-08,171;UBERON:0006601,2.53e-08,171;UBERON:0010314,4.60e-08,132;UBERON:0000055,4.76e-08,68;UBERON:0002021,1.96e-07,5;UBERON:0001872,2.48e-07,5 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,1.74467704820074,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0.246242116153576,0,0,1.14494394852423,0.410623275218653,0.502170558379211,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0,0.579386075843295,0.795285947051099,0,0.189069634328136,0.443458794925128,0.087834785693126,2.22664428346111,0,0,0,0,0,0,0,0,1.98762407366705,0,3.12426451446835,5.6530794192401,2.93649605346934,2.20094433552054,1.04497483268405,9.8198368484345,8.89415656716776,3.3472061276467,3.62546385398232,5.32190474002959,1.70843440283719,2.57364156242108,0,7.85837608899902,6.73588117878509,4.27923625836624,3.06633274931766,2.84779697870439,3.11442964681692,0,0,0,0,0.379891534993739,0,3.44203944898576,1.06400514659507,1.12135520028461,1.06748995729705,0,0.622422070799533,0.538842688278752,0,0.454072282934794,0,0,0,0.570471821544449,0,0,0,0,0.204154171254893,0,0,0,0.989067717114227,0,0,0.168336113954066,0.375355559615893,0,3.07284334616587,0.919463387397059,1.05166641234618,0.226864366320042,2.69084453533293,1.2813443329114,3.39091041855299,3.30100205692843,1.8549455262919,0.772921620136887,1.11670113798954,2.70042131586026,1.94874010322397,2.77677151668526,1.19664868234989,7.43571861366535,2.13005755509969,1.10827308050404,2.03472710772585,0,0,0,0.731842236777572,0.927708378250397,0.929551542956147,0.725627385107593,1.26160425437814,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.90524363699719,1.40241773803446,0,0,0,0,5.31710916013264,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,4.04226053731007,4.62985512576611,3.61482889245737,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,0.126995788584338,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.399891964728228,0,0,0,0.479249710983165,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,1.27047312111232,3.90419561572865,1.54657762555539,0.837581326671744,0,0,0,0,0,0,0,1.45579603071565,2.3195768543631,0.946214490203608,1.7571212248907,0,0,0,1.99267679560631,0.737476674166813,2.08520674723399,0.195801157462741,0.343143423810856,0.206768026122887,0.215714200818617,0,0,0,0,0,0.306923946576125,0,0.256278298511402,0,0,0,0.462629081407967,1.24293207719189,2.05317890034523,0,0.697262270759755,0,0,0,0.68888668898764,0.910455840033585,0.786746489756545,0,0,0,0,0,2.27466768141793,2.72149928442425,1.72732732881711,3.08454505380579,0,0,0,0,0,0,0,0,0,0.325378394664303,2.57602529119306,0.457847324091717,0.41254749960294,0,0,1.6068392984416,0.676695028044854,0.308097234229289,0.15350367472613,0.137836572484531,0.214840489736547,0.290033387828457,0.170453254832202,0.267096106940212,0,0,0,0,0.464845549297286,0.94443704049192,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0.636406495851874,0,0,0.54907405947211,0.353437207037059,0,0,0,0,0,0,1.09199929126389,0.565621727814851,1.13008116620243,0,0,0,0,3.27947376023316,0,0,0,0,0,0,1.06428319221179,0.844430541190656,0.658589785919804,0,0,0,0,0,1.41215701165169,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.99921590399346,0,0,3.51619630252546,0,0,0,0.23874448473769,0,0,0.994147647766298,0.984685914873589,0,0,0,1.39473591775749,0,0,0.409074730008619,0,0,0,0,0,1.38100767891707,0,1.11136990144637,3.87733098438087,4.36010061360701,5.98841394003583,0,0,2.17499872630438,0,0,0,0,8.45653378811438,0,5.31444831488303,3.97968247463846,0,0.110579259931225,0,5.70402032600329,0,0,3.46276163267087,1.25336261431701,0,0,0,0.31900115973192,0.183195186803725,0,0,3.45356564069054,0,0,0,0,0,0,0,0,0,1.08194319871046,0,1.06149077404007,1.22206028986725,0,0,0,0.67401132980677,3.21031058919516,1.40558667435203,0,0,0,0.789168805698781,1.20990716048664,4.89716418608784,2.21153028699708,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,1.06687918137261,0,2.71176888936639,0.137041924646751,0,6.77425516727902,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,1.4279750469085,0.577901179803038,4.20294202096853,0.547621515567972,0,0,0,3.90995361781156,2.06244381610515,3.58936512288407,1.39775300349294,1.28767814440971,1.11585728720936,2.75452237195578,0.360299883542404,0,0,0,0,0,0,3.18091875923721,1.63444087333891,2.89355667237035,2.33817042215297,1.66176135211674,0,0,7.65444413891111,0,1.57611414598396,4.98318587282482,0,0,0,5.71756261098694,0.662091970365432,0,0.542999601753713,0.864221491201268,0,0,0,2.04465626142506,0.339936274560377,0.732761168390412,1.32506888912221,0.646414781807753,0.39669780522807,0,0,3.09683496446315,12.5763444079733,4.55662960881915,0.992332043623902,0,0,0,0.544017803369474,1.7548292581589,0.919036730290385,1.96723578425883,1.57054096250234,7.08854543973589,7.07752336431386,6.63511932744449,0,0.332787154610557,0.68306043235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| ||
|short_description=p5@LDB2 | |short_description=p5@LDB2 | ||
}} | }} |
Latest revision as of 15:36, 16 September 2015
Short description: | p5@LDB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LDB2_5end |
Coexpression cluster: | C1083_lung_uterus_Endothelial_neuroectodermal_spleen_mesenchymal_occipital |
Association with transcript: | -2bp_to_ENST00000441778_5end |
EntrezGene: | LDB2 |
HGNC: | 6533 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.01e-19 | 24 |
endothelial cell | 4.37e-18 | 36 |
blood vessel endothelial cell | 6.05e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.05e-13 | 18 |
meso-epithelial cell | 1.38e-12 | 45 |
lining cell | 1.40e-08 | 58 |
barrier cell | 1.40e-08 | 58 |
lymphangioblast | 6.95e-08 | 6 |
endothelial cell of lymphatic vessel | 6.95e-08 | 6 |
vascular lymphangioblast | 6.95e-08 | 6 |
vein endothelial cell | 1.94e-07 | 6 |